RNA–Protein interactions for RNA: ENST00000558070.1

TRPM1-205, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-205ENST00000558070 GMIPQ9P107 970 aa5.44□□□□□ -1.54
TRPM1-205ENST00000558070 ZNRF3Q9ULT6 936 aa5.44□□□□□ -1.54
TRPM1-205ENST00000558070 R3HCC1Q9Y3T6 440 aaKnown RBP5.44□□□□□ -1.54
TRPM1-205ENST00000558070 NRXN1Q9ULB1 1477 aa5.44□□□□□ -1.54
TRPM1-205ENST00000558070 ABCC1P33527 1531 aa5.43□□□□□ -1.54
TRPM1-205ENST00000558070 MEIS3P2A8K0S8 358 aa5.43□□□□□ -1.54
TRPM1-205ENST00000558070 CHURC1-FNTBB4DL54 471 aa5.43□□□□□ -1.54
TRPM1-205ENST00000558070 IGF2BP3O00425 579 aaKnown RBP eCLIP5.43□□□□□ -1.54
TRPM1-205ENST00000558070 TOM1O60784 492 aa5.43□□□□□ -1.54
TRPM1-205ENST00000558070 TPM3P06753 285 aa5.43□□□□□ -1.54
TRPM1-205ENST00000558070 FOSL1P15407 271 aa5.43□□□□□ -1.54
TRPM1-205ENST00000558070 GTF2F1P35269 517 aaKnown RBP eCLIP5.43□□□□□ -1.54
TRPM1-205ENST00000558070 KIAA2012Q0VF49 1180 aa5.43□□□□□ -1.54
TRPM1-205ENST00000558070 RGL3Q3MIN7 710 aa5.43□□□□□ -1.54
TRPM1-205ENST00000558070 ALDH1L2Q3SY69 923 aa5.43□□□□□ -1.54
TRPM1-205ENST00000558070 CDCP2Q5VXM1 449 aa5.43□□□□□ -1.54
TRPM1-205ENST00000558070 LETMD1Q6P1Q0 360 aa5.43□□□□□ -1.54
TRPM1-205ENST00000558070 INTS5Q6P9B9 1019 aaKnown RBP5.43□□□□□ -1.54
TRPM1-205ENST00000558070 FAM13CQ8NE31 585 aa5.43□□□□□ -1.54
TRPM1-205ENST00000558070 MYRIPQ8NFW9 859 aa5.43□□□□□ -1.54
TRPM1-205ENST00000558070 RIN3Q8TB24 985 aa5.43□□□□□ -1.54
TRPM1-205ENST00000558070 CYB5D2Q8WUJ1 264 aa5.43□□□□□ -1.54
TRPM1-205ENST00000558070 SEC16BQ96JE7 1060 aa5.43□□□□□ -1.54
TRPM1-205ENST00000558070 HEXIM2Q96MH2 286 aaKnown RBP5.43□□□□□ -1.54
TRPM1-205ENST00000558070 INPP5FQ9Y2H2 1132 aa5.43□□□□□ -1.54
TRPM1-205ENST00000558070 LEMD3Q9Y2U8 911 aa5.43□□□□□ -1.54
TRPM1-205ENST00000558070 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.43□□□□□ -1.54
TRPM1-205ENST00000558070 KIF24Q5T7B8 1368 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 CDC42BPGQ6DT37 1551 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 NOS1P29475 1434 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 PPIP5K1Q6PFW1 1433 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 CDC45O75419 566 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 IMPDH2P12268 514 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 HOXA10P31260 410 aaPredicted RBP5.42□□□□□ -1.54
TRPM1-205ENST00000558070 MCM2P49736 904 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 FAM193AP78312 1265 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 RBM10P98175 930 aaKnown RBP5.42□□□□□ -1.54
TRPM1-205ENST00000558070 LRRFIP1Q32MZ4 808 aaKnown RBP5.42□□□□□ -1.54
TRPM1-205ENST00000558070 ZSCAN23Q3MJ62 389 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 LRSAM1Q6UWE0 723 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 ATF7IPQ6VMQ6 1270 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 TCP11L2Q8N4U5 519 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 RBBP8NLQ8NC74 664 aaPredicted RBP5.42□□□□□ -1.54
TRPM1-205ENST00000558070 DNAJB8Q8NHS0 232 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 PPP1R13LQ8WUF5 828 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 TMEM40Q8WWA1 233 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 MIPEPQ99797 713 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 TINF2Q9BSI4 451 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 CNNM2Q9H8M5 875 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 MKNK2Q9HBH9 465 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 CEP131Q9UPN4 1083 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 EFR3BQ9Y2G0 817 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 PIK3R4Q99570 1358 aa5.42□□□□□ -1.54
TRPM1-205ENST00000558070 NSD3Q9BZ95 1437 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 KRTAP4-8A0A0G2JLE6 195 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 KIAA1324LA8MWY0 1029 aaPredicted RBP5.41□□□□□ -1.54
TRPM1-205ENST00000558070 CYP26A1O43174 497 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 ATF4P18848 351 aaPredicted RBP5.41□□□□□ -1.54
TRPM1-205ENST00000558070 HNRNPMP52272 730 aaKnown RBP eCLIP5.41□□□□□ -1.54
TRPM1-205ENST00000558070 SYCP1Q15431 976 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 MSMPQ1L6U9 139 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 OVOS1Q6IE37 1185 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 ZNF746Q6NUN9 644 aaPredicted RBP5.41□□□□□ -1.54
TRPM1-205ENST00000558070 CASC1Q6TDU7 716 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 C22orf34Q6ZV56 151 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 MORC1Q86VD1 984 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 CHD1LQ86WJ1 897 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 CREBRFQ8IUR6 639 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 XAGE3Q8WTP9 111 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 ARHGAP45Q92619 1136 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 ATG4CQ96DT6 458 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 CCDC74BQ96LY2 380 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 KRTAP9-9Q9BYP9 154 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 KRTAP9-4Q9BYQ2 154 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 CAPN10Q9HC96 672 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 DIAPH3Q9NSV4 1193 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 SMC4Q9NTJ3 1288 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 ZBTB40Q9NUA8 1239 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 RGS17Q9UGC6 210 aaPredicted RBP5.41□□□□□ -1.54
TRPM1-205ENST00000558070 KLHL3Q9UH77 587 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 GTF2IRD1Q9UHL9 959 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 PPT2Q9UMR5 302 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 MAPK8IP1Q9UQF2 711 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 U3KQE9 123 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 PPLO60437 1756 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 CNTNAP4Q9C0A0 1308 aa5.41□□□□□ -1.54
TRPM1-205ENST00000558070 PTCH1Q13635 1447 aa5.4□□□□□ -1.54
TRPM1-205ENST00000558070 CPS1P31327 1500 aa5.4□□□□□ -1.54
TRPM1-205ENST00000558070 LMTK2Q8IWU2 1503 aa5.4□□□□□ -1.54
TRPM1-205ENST00000558070 RGS13O14921 159 aa5.4□□□□□ -1.54
TRPM1-205ENST00000558070 MED26O95402 600 aa5.4□□□□□ -1.54
TRPM1-205ENST00000558070 TRIM27P14373 513 aa5.4□□□□□ -1.54
TRPM1-205ENST00000558070 OXCT1P55809 520 aa5.4□□□□□ -1.54
TRPM1-205ENST00000558070 CHAF1AQ13111 956 aaPredicted RBP5.4□□□□□ -1.54
TRPM1-205ENST00000558070 ARSHQ5FYA8 562 aa5.4□□□□□ -1.54
TRPM1-205ENST00000558070 INTS3Q68E01 1043 aaKnown RBP5.4□□□□□ -1.54
TRPM1-205ENST00000558070 NLRC3Q7RTR2 1065 aa5.4□□□□□ -1.54
TRPM1-205ENST00000558070 ITPRIPQ8IWB1 547 aa5.4□□□□□ -1.54
TRPM1-205ENST00000558070 PDCL2Q8N4E4 241 aa5.4□□□□□ -1.54
TRPM1-205ENST00000558070 SLC43A3Q8NBI5 491 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms