RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 NEDD1Q8NHV4 660 aa19.6■□□□□ 0.73
NEK9-211ENST00000557673 RUFY2Q8WXA3 655 aa19.6■□□□□ 0.73
NEK9-211ENST00000557673 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.6■□□□□ 0.73
NEK9-211ENST00000557673 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.6■□□□□ 0.73
NEK9-211ENST00000557673 MYADML2A6NDP7 307 aa19.59■□□□□ 0.73
NEK9-211ENST00000557673 CDC45O75419 566 aa19.59■□□□□ 0.73
NEK9-211ENST00000557673 HSPD1P10809 573 aaKnown RBP19.59■□□□□ 0.73
NEK9-211ENST00000557673 BMP3P12645 472 aa19.59■□□□□ 0.73
NEK9-211ENST00000557673 TFAP4Q01664 338 aa19.59■□□□□ 0.73
NEK9-211ENST00000557673 SLFN13Q68D06 897 aa19.59■□□□□ 0.73
NEK9-211ENST00000557673 PSRC1Q6PGN9 363 aaPredicted RBP19.59■□□□□ 0.73
NEK9-211ENST00000557673 CCDC144CPQ8IYA2 1237 aa19.59■□□□□ 0.73
NEK9-211ENST00000557673 LRRC47Q8N1G4 583 aaKnown RBP19.59■□□□□ 0.73
NEK9-211ENST00000557673 CHURC1Q8WUH1 139 aa19.59■□□□□ 0.73
NEK9-211ENST00000557673 ACAD9Q9H845 621 aa19.59■□□□□ 0.73
NEK9-211ENST00000557673 GTF3C3Q9Y5Q9 886 aa19.59■□□□□ 0.73
NEK9-211ENST00000557673 PRUNE2Q8WUY3 3088 aa19.59■□□□□ 0.73
NEK9-211ENST00000557673 CDH23Q9H251 3354 aa19.58■□□□□ 0.73
NEK9-211ENST00000557673 ASB14A6NK59 587 aa19.58■□□□□ 0.72
NEK9-211ENST00000557673 SGSM2O43147 1006 aa19.58■□□□□ 0.72
NEK9-211ENST00000557673 CABYRO75952 493 aa19.58■□□□□ 0.72
NEK9-211ENST00000557673 STAT2P52630 851 aa19.58■□□□□ 0.72
NEK9-211ENST00000557673 NKX3-2P78367 333 aa19.58■□□□□ 0.72
NEK9-211ENST00000557673 ALX1Q15699 326 aa19.58■□□□□ 0.72
NEK9-211ENST00000557673 TMEM240Q5SV17 173 aa19.58■□□□□ 0.72
NEK9-211ENST00000557673 NOL8Q76FK4 1167 aaKnown RBP19.58■□□□□ 0.72
NEK9-211ENST00000557673 FAM160B2Q86V87 743 aa19.58■□□□□ 0.72
NEK9-211ENST00000557673 GAS2L1Q99501 681 aaPredicted RBP19.58■□□□□ 0.72
NEK9-211ENST00000557673 SEZ6LQ9BYH1 1024 aa19.58■□□□□ 0.72
NEK9-211ENST00000557673 MTIF3Q9H2K0 278 aaKnown RBP19.58■□□□□ 0.72
NEK9-211ENST00000557673 ANAPC4Q9UJX5 808 aa19.58■□□□□ 0.72
NEK9-211ENST00000557673 ISY1Q9ULR0 285 aaKnown RBP19.58■□□□□ 0.72
NEK9-211ENST00000557673 TMEM232C9JQI7 657 aa19.57■□□□□ 0.72
NEK9-211ENST00000557673 FGAP02671 866 aa19.57■□□□□ 0.72
NEK9-211ENST00000557673 CSF2RAP15509 400 aa19.57■□□□□ 0.72
NEK9-211ENST00000557673 TNFAIP2Q03169 654 aa19.57■□□□□ 0.72
NEK9-211ENST00000557673 IKQ13123 557 aaPredicted RBP19.57■□□□□ 0.72
NEK9-211ENST00000557673 TKFCQ3LXA3 575 aa19.57■□□□□ 0.72
NEK9-211ENST00000557673 PRDM6Q9NQX0 595 aa19.57■□□□□ 0.72
NEK9-211ENST00000557673 HOMER2Q9NSB8 354 aa19.57■□□□□ 0.72
NEK9-211ENST00000557673 ZEB2O60315 1214 aa19.56■□□□□ 0.72
NEK9-211ENST00000557673 TJAP1Q5JTD0 557 aa19.56■□□□□ 0.72
NEK9-211ENST00000557673 FAM126BQ8IXS8 530 aa19.56■□□□□ 0.72
NEK9-211ENST00000557673 GMCL1Q96IK5 515 aa19.56■□□□□ 0.72
NEK9-211ENST00000557673 FGD4Q96M96 766 aa19.56■□□□□ 0.72
NEK9-211ENST00000557673 ESYT1Q9BSJ8 1104 aa19.56■□□□□ 0.72
NEK9-211ENST00000557673 DSCC1Q9BVC3 393 aa19.56■□□□□ 0.72
NEK9-211ENST00000557673 TTC28Q96AY4 2481 aa19.56■□□□□ 0.72
NEK9-211ENST00000557673 TSPY2A6NKD2 308 aa19.55■□□□□ 0.72
NEK9-211ENST00000557673 ADCY6O43306 1168 aa19.55■□□□□ 0.72
NEK9-211ENST00000557673 RANBP6O60518 1105 aaKnown RBP19.55■□□□□ 0.72
NEK9-211ENST00000557673 NMT2O60551 498 aa19.55■□□□□ 0.72
NEK9-211ENST00000557673 SLC1A4P43007 532 aa19.55■□□□□ 0.72
NEK9-211ENST00000557673 CNTN2Q02246 1040 aa19.55■□□□□ 0.72
NEK9-211ENST00000557673 RASIP1Q5U651 963 aa19.55■□□□□ 0.72
NEK9-211ENST00000557673 ZNF365Q70YC5 407 aa19.55■□□□□ 0.72
NEK9-211ENST00000557673 C16orf59Q7L2K0 433 aa19.55■□□□□ 0.72
NEK9-211ENST00000557673 FAM133AQ8N9E0 248 aa19.55■□□□□ 0.72
NEK9-211ENST00000557673 STAG1Q8WVM7 1258 aa19.55■□□□□ 0.72
NEK9-211ENST00000557673 PBX4Q9BYU1 374 aa19.55■□□□□ 0.72
NEK9-211ENST00000557673 AP5M1Q9H0R1 490 aa19.55■□□□□ 0.72
NEK9-211ENST00000557673 MSRAQ9UJ68 235 aa19.55■□□□□ 0.72
NEK9-211ENST00000557673 ORC4O43929 436 aa19.54■□□□□ 0.72
NEK9-211ENST00000557673 PLA2G6O60733 806 aa19.54■□□□□ 0.72
NEK9-211ENST00000557673 CD4P01730 458 aa19.54■□□□□ 0.72
NEK9-211ENST00000557673 HAND2P61296 217 aa19.54■□□□□ 0.72
NEK9-211ENST00000557673 IRX5P78411 483 aaPredicted RBP19.54■□□□□ 0.72
NEK9-211ENST00000557673 RAB30Q15771 203 aa19.54■□□□□ 0.72
NEK9-211ENST00000557673 CHMP4CQ96CF2 233 aa19.54■□□□□ 0.72
NEK9-211ENST00000557673 PPP1R12CQ9BZL4 782 aa19.54■□□□□ 0.72
NEK9-211ENST00000557673 KATNBL1Q9H079 304 aa19.54■□□□□ 0.72
NEK9-211ENST00000557673 IL23AQ9NPF7 189 aa19.54■□□□□ 0.72
NEK9-211ENST00000557673 IL17RBQ9NRM6 502 aa19.54■□□□□ 0.72
NEK9-211ENST00000557673 TOMM22Q9NS69 142 aa19.54■□□□□ 0.72
NEK9-211ENST00000557673 RNF146Q9NTX7 359 aa19.54■□□□□ 0.72
NEK9-211ENST00000557673 SPTBN5Q9NRC6 3674 aaKnown RBP19.54■□□□□ 0.72
NEK9-211ENST00000557673 FGRP09769 529 aa19.53■□□□□ 0.72
NEK9-211ENST00000557673 FSCN1Q16658 493 aaKnown RBP19.53■□□□□ 0.72
NEK9-211ENST00000557673 RRP12Q5JTH9 1297 aaKnown RBP19.53■□□□□ 0.72
NEK9-211ENST00000557673 AKNAD1Q5T1N1 836 aa19.53■□□□□ 0.72
NEK9-211ENST00000557673 CASC1Q6TDU7 716 aa19.53■□□□□ 0.72
NEK9-211ENST00000557673 SLC43A3Q8NBI5 491 aa19.53■□□□□ 0.72
NEK9-211ENST00000557673 HERVK_113Q902F9 699 aa19.53■□□□□ 0.72
NEK9-211ENST00000557673 TRERF1Q96PN7 1200 aa19.53■□□□□ 0.72
NEK9-211ENST00000557673 HIPK3Q9H422 1215 aa19.53■□□□□ 0.72
NEK9-211ENST00000557673 A1CFQ9NQ94 594 aaKnown RBP19.53■□□□□ 0.72
NEK9-211ENST00000557673 STX8Q9UNK0 236 aa19.53■□□□□ 0.72
NEK9-211ENST00000557673 CTAGE5O15320 804 aa19.52■□□□□ 0.72
NEK9-211ENST00000557673 FGBP02675 491 aa19.52■□□□□ 0.72
NEK9-211ENST00000557673 ACRP10323 421 aa19.52■□□□□ 0.72
NEK9-211ENST00000557673 CYP2C18P33260 490 aa19.52■□□□□ 0.72
NEK9-211ENST00000557673 BEX3Q00994 111 aa19.52■□□□□ 0.72
NEK9-211ENST00000557673 IQSEC1Q6DN90 963 aa19.52■□□□□ 0.72
NEK9-211ENST00000557673 CXCL17Q6UXB2 119 aa19.52■□□□□ 0.72
NEK9-211ENST00000557673 TLK2Q86UE8 772 aa19.52■□□□□ 0.72
NEK9-211ENST00000557673 AGBL1Q96MI9 1066 aa19.52■□□□□ 0.72
NEK9-211ENST00000557673 GNEQ9Y223 722 aaKnown RBP19.52■□□□□ 0.72
NEK9-211ENST00000557673 Q9Y3F1 56 aa19.52■□□□□ 0.72
NEK9-211ENST00000557673 ALAS1P13196 640 aa19.51■□□□□ 0.71
NEK9-211ENST00000557673 MCCP23508 829 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms