RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 EPB41L4AQ9HCS5 686 aaPredicted RBP21.89■■□□□ 1.09
ABCD4-228ENST00000557588 SLC4A7Q9Y6M7 1214 aa21.89■■□□□ 1.09
ABCD4-228ENST00000557588 TCF20Q9UGU0 1960 aaKnown RBP21.88■■□□□ 1.09
ABCD4-228ENST00000557588 ZNF536O15090 1300 aa21.88■■□□□ 1.09
ABCD4-228ENST00000557588 MINDY4BA8MYZ0 360 aa21.88■■□□□ 1.09
ABCD4-228ENST00000557588 TTLL1O95922 423 aa21.88■■□□□ 1.09
ABCD4-228ENST00000557588 SMPD1P17405 629 aa21.88■■□□□ 1.09
ABCD4-228ENST00000557588 RPUSD2Q8IZ73 545 aaKnown RBP21.88■■□□□ 1.09
ABCD4-228ENST00000557588 AP5M1Q9H0R1 490 aa21.88■■□□□ 1.09
ABCD4-228ENST00000557588 TRPV6Q9H1D0 765 aa21.88■■□□□ 1.09
ABCD4-228ENST00000557588 ZNF287Q9HBT7 754 aa21.88■■□□□ 1.09
ABCD4-228ENST00000557588 RNF146Q9NTX7 359 aa21.88■■□□□ 1.09
ABCD4-228ENST00000557588 ZBTB40Q9NUA8 1239 aa21.88■■□□□ 1.09
ABCD4-228ENST00000557588 ZEB2O60315 1214 aa21.87■■□□□ 1.09
ABCD4-228ENST00000557588 PFKMP08237 780 aa21.87■■□□□ 1.09
ABCD4-228ENST00000557588 BMP3P12645 472 aa21.87■■□□□ 1.09
ABCD4-228ENST00000557588 AAK1Q2M2I8 961 aa21.87■■□□□ 1.09
ABCD4-228ENST00000557588 Q9Y3F1 56 aa21.87■■□□□ 1.09
ABCD4-228ENST00000557588 TANC1Q9C0D5 1861 aa21.86■■□□□ 1.09
ABCD4-228ENST00000557588 MS4A1P11836 297 aa21.86■■□□□ 1.09
ABCD4-228ENST00000557588 MYOGP15173 224 aa21.86■■□□□ 1.09
ABCD4-228ENST00000557588 ATP2A2P16615 1042 aaKnown RBP21.86■■□□□ 1.09
ABCD4-228ENST00000557588 POU3F3P20264 500 aaPredicted RBP21.86■■□□□ 1.09
ABCD4-228ENST00000557588 PTGS1P23219 599 aa21.86■■□□□ 1.09
ABCD4-228ENST00000557588 STAT2P52630 851 aa21.86■■□□□ 1.09
ABCD4-228ENST00000557588 TFF2Q03403 129 aa21.86■■□□□ 1.09
ABCD4-228ENST00000557588 TKFCQ3LXA3 575 aa21.86■■□□□ 1.09
ABCD4-228ENST00000557588 SLFN13Q68D06 897 aa21.86■■□□□ 1.09
ABCD4-228ENST00000557588 MICALL1Q8N3F8 863 aa21.86■■□□□ 1.09
ABCD4-228ENST00000557588 APPBP2Q92624 585 aa21.86■■□□□ 1.09
ABCD4-228ENST00000557588 AGBL1Q96MI9 1066 aa21.86■■□□□ 1.09
ABCD4-228ENST00000557588 DDX19BQ9UMR2 479 aa21.86■■□□□ 1.09
ABCD4-228ENST00000557588 COG6Q9Y2V7 657 aa21.86■■□□□ 1.09
ABCD4-228ENST00000557588 ERC2O15083 957 aa21.85■■□□□ 1.09
ABCD4-228ENST00000557588 PRDM1O75626 825 aa21.85■■□□□ 1.09
ABCD4-228ENST00000557588 PSMC6P62333 389 aa21.85■■□□□ 1.09
ABCD4-228ENST00000557588 FAM160B2Q86V87 743 aa21.85■■□□□ 1.09
ABCD4-228ENST00000557588 ZNF444Q8N0Y2 327 aaPredicted RBP21.85■■□□□ 1.09
ABCD4-228ENST00000557588 OSBP2Q969R2 916 aa21.85■■□□□ 1.09
ABCD4-228ENST00000557588 GMCL1Q96IK5 515 aa21.85■■□□□ 1.09
ABCD4-228ENST00000557588 ALDH8A1Q9H2A2 487 aaPredicted RBP21.85■■□□□ 1.09
ABCD4-228ENST00000557588 PRRC2BQ5JSZ5 2229 aaKnown RBP21.85■■□□□ 1.09
ABCD4-228ENST00000557588 ZBBXA8MT70 800 aa21.84■■□□□ 1.09
ABCD4-228ENST00000557588 TMEM232C9JQI7 657 aa21.84■■□□□ 1.09
ABCD4-228ENST00000557588 DYNC1LI2O43237 492 aaPredicted RBP21.84■■□□□ 1.09
ABCD4-228ENST00000557588 TDO2P48775 406 aa21.84■■□□□ 1.09
ABCD4-228ENST00000557588 KCNQ1P51787 676 aa21.84■■□□□ 1.09
ABCD4-228ENST00000557588 IQSEC1Q6DN90 963 aa21.84■■□□□ 1.09
ABCD4-228ENST00000557588 TAPT1Q6NXT6 567 aa21.84■■□□□ 1.09
ABCD4-228ENST00000557588 FBXO16Q8IX29 292 aaPredicted RBP21.84■■□□□ 1.09
ABCD4-228ENST00000557588 KBTBD3Q8NAB2 608 aa21.84■■□□□ 1.09
ABCD4-228ENST00000557588 SCLYQ96I15 445 aa21.84■■□□□ 1.09
ABCD4-228ENST00000557588 PDGFCQ9NRA1 345 aa21.84■■□□□ 1.09
ABCD4-228ENST00000557588 GPAA1O43292 621 aa21.83■■□□□ 1.09
ABCD4-228ENST00000557588 GNAT2P19087 354 aa21.83■■□□□ 1.09
ABCD4-228ENST00000557588 HNRNPUQ00839 825 aaKnown RBP eCLIP21.83■■□□□ 1.09
ABCD4-228ENST00000557588 NEDD1Q8NHV4 660 aa21.83■■□□□ 1.09
ABCD4-228ENST00000557588 TRERF1Q96PN7 1200 aa21.83■■□□□ 1.09
ABCD4-228ENST00000557588 LRRCC1Q9C099 1032 aa21.83■■□□□ 1.09
ABCD4-228ENST00000557588 VTA1Q9NP79 307 aa21.83■■□□□ 1.09
ABCD4-228ENST00000557588 CYP39A1Q9NYL5 469 aa21.83■■□□□ 1.09
ABCD4-228ENST00000557588 MTCH2Q9Y6C9 303 aa21.83■■□□□ 1.09
ABCD4-228ENST00000557588 DDX49Q9Y6V7 483 aaKnown RBP21.83■■□□□ 1.09
ABCD4-228ENST00000557588 SCN5AQ14524 2016 aa21.82■■□□□ 1.08
ABCD4-228ENST00000557588 PLA2G6O60733 806 aa21.82■■□□□ 1.08
ABCD4-228ENST00000557588 CA3P07451 260 aa21.82■■□□□ 1.08
ABCD4-228ENST00000557588 HOXD11P31277 338 aaPredicted RBP21.82■■□□□ 1.08
ABCD4-228ENST00000557588 TTLL4Q14679 1199 aa21.82■■□□□ 1.08
ABCD4-228ENST00000557588 TMEM67Q5HYA8 995 aa21.82■■□□□ 1.08
ABCD4-228ENST00000557588 MORC4Q8TE76 937 aa21.82■■□□□ 1.08
ABCD4-228ENST00000557588 CHURC1Q8WUH1 139 aa21.82■■□□□ 1.08
ABCD4-228ENST00000557588 STAG1Q8WVM7 1258 aa21.82■■□□□ 1.08
ABCD4-228ENST00000557588 ECHDC1Q9NTX5 307 aa21.82■■□□□ 1.08
ABCD4-228ENST00000557588 SUPT20HL2P0C7V6 817 aa21.81■■□□□ 1.08
ABCD4-228ENST00000557588 TSPY3P0CV98 308 aa21.81■■□□□ 1.08
ABCD4-228ENST00000557588 TSPY8P0CW00 308 aa21.81■■□□□ 1.08
ABCD4-228ENST00000557588 TMEM63BQ5T3F8 832 aa21.81■■□□□ 1.08
ABCD4-228ENST00000557588 TRMT13Q9NUP7 481 aaKnown RBP21.81■■□□□ 1.08
ABCD4-228ENST00000557588 ARIH1Q9Y4X5 557 aaPredicted RBP21.81■■□□□ 1.08
ABCD4-228ENST00000557588 COL4A4P53420 1690 aaPredicted RBP21.81■■□□□ 1.08
ABCD4-228ENST00000557588 SCN10AQ9Y5Y9 1956 aa21.81■■□□□ 1.08
ABCD4-228ENST00000557588 TNKSO95271 1327 aa21.8■■□□□ 1.08
ABCD4-228ENST00000557588 RNF113AO15541 343 aaKnown RBP21.8■■□□□ 1.08
ABCD4-228ENST00000557588 GTPBP6O43824 516 aaPredicted RBP21.8■■□□□ 1.08
ABCD4-228ENST00000557588 ZFYP08048 801 aaPredicted RBP21.8■■□□□ 1.08
ABCD4-228ENST00000557588 ALAS1P13196 640 aa21.8■■□□□ 1.08
ABCD4-228ENST00000557588 SLC1A4P43007 532 aa21.8■■□□□ 1.08
ABCD4-228ENST00000557588 IKQ13123 557 aaPredicted RBP21.8■■□□□ 1.08
ABCD4-228ENST00000557588 SKIV2LQ15477 1246 aaKnown RBP21.8■■□□□ 1.08
ABCD4-228ENST00000557588 DUSP28Q4G0W2 176 aa21.8■■□□□ 1.08
ABCD4-228ENST00000557588 EEPD1Q7L9B9 569 aa21.8■■□□□ 1.08
ABCD4-228ENST00000557588 SLC9A7Q96T83 725 aa21.8■■□□□ 1.08
ABCD4-228ENST00000557588 ISY1Q9ULR0 285 aaKnown RBP21.8■■□□□ 1.08
ABCD4-228ENST00000557588 COG5Q9UP83 839 aa21.8■■□□□ 1.08
ABCD4-228ENST00000557588 M0R2C6 588 aa21.79■■□□□ 1.08
ABCD4-228ENST00000557588 MUM1L1Q5H9M0 696 aa21.79■■□□□ 1.08
ABCD4-228ENST00000557588 POLR3EQ9NVU0 708 aa21.79■■□□□ 1.08
ABCD4-228ENST00000557588 EPOPA6NHQ4 379 aa21.78■■□□□ 1.08
ABCD4-228ENST00000557588 RFXAPO00287 272 aa21.78■■□□□ 1.08
ABCD4-228ENST00000557588 CYP2C9P11712 490 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms