RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 MORC4Q8TE76 937 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 USP7Q93009 1102 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 VWCEQ96DN2 955 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 MAGEB10Q96LZ2 347 aaPredicted RBP4.18□□□□□ -1.74
TRAV28-201ENST00000557548 ZDHHC15Q96MV8 337 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 TTC1Q99614 292 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 YIPF4Q9BSR8 244 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 TRIM8Q9BZR9 551 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 NKX2-4Q9H2Z4 354 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 GSX1Q9H4S2 264 aaPredicted RBP4.18□□□□□ -1.74
TRAV28-201ENST00000557548 AASDHPPTQ9NRN7 309 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 FHOD1Q9Y613 1164 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 ASXL2Q76L83 1435 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 NCANO14594 1321 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 A0A087WZG4 1122 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 A0A0A0MRY4 1105 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 PRRG2O14669 202 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 KIF3BO15066 747 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 VAMP4O75379 141 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 SLITRK5O94991 958 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 CRTAMO95727 393 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 RAB6AP20340 208 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 HOXC12P31275 282 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 ID4P47928 161 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 RAC1P63000 192 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 GRB10Q13322 594 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 PIN1Q13526 163 aaPredicted RBP4.17□□□□□ -1.74
TRAV28-201ENST00000557548 DPY19L1Q2PZI1 675 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 MAP9Q49MG5 647 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 SLC35F1Q5T1Q4 408 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 CCSAPQ6IQ19 270 aaPredicted RBP4.17□□□□□ -1.74
TRAV28-201ENST00000557548 UBE2R2Q712K3 238 aaPredicted RBP4.17□□□□□ -1.74
TRAV28-201ENST00000557548 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.17□□□□□ -1.74
TRAV28-201ENST00000557548 MAMDC2Q7Z304 686 aaPredicted RBP4.17□□□□□ -1.74
TRAV28-201ENST00000557548 ZBTB46Q86UZ6 589 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 CHPFQ8IZ52 775 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 MYO1HQ8N1T3 1032 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 AGGF1Q8N302 714 aaeCLIP4.17□□□□□ -1.74
TRAV28-201ENST00000557548 CNTD1Q8N815 330 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 OR2W6PQ8NHA6 318 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 SYTL5Q8TDW5 730 aaPredicted RBP4.17□□□□□ -1.74
TRAV28-201ENST00000557548 RNF141Q8WVD5 230 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 HOOK2Q96ED9 719 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 C1orf159Q96HA4 380 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 DSCC1Q9BVC3 393 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 ASPNQ9BXN1 380 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 PRDM14Q9GZV8 571 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 IFT22Q9H7X7 185 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.17□□□□□ -1.74
TRAV28-201ENST00000557548 LGR6Q9HBX8 967 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 GFOD1Q9NXC2 390 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 TRHDEQ9UKU6 1024 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 PCOLCE2Q9UKZ9 415 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 PCDHA9Q9Y5H5 950 aa4.17□□□□□ -1.74
TRAV28-201ENST00000557548 ZNF891A8MT65 544 aaPredicted RBP4.16□□□□□ -1.74
TRAV28-201ENST00000557548 B4E1Z4 1266 aa4.16□□□□□ -1.74
TRAV28-201ENST00000557548 M0R2C6 588 aa4.16□□□□□ -1.74
TRAV28-201ENST00000557548 LRRN2O75325 713 aa4.16□□□□□ -1.74
TRAV28-201ENST00000557548 BPIP17213 487 aa4.16□□□□□ -1.74
TRAV28-201ENST00000557548 ETV3P41162 512 aa4.16□□□□□ -1.74
TRAV28-201ENST00000557548 AMPD2Q01433 879 aa4.16□□□□□ -1.74
TRAV28-201ENST00000557548 CYP4F3Q08477 520 aa4.16□□□□□ -1.74
TRAV28-201ENST00000557548 DENND5AQ6IQ26 1287 aa4.16□□□□□ -1.74
TRAV28-201ENST00000557548 ZCCHC8Q6NZY4 707 aaKnown RBP4.16□□□□□ -1.74
TRAV28-201ENST00000557548 KCNT2Q6UVM3 1135 aa4.16□□□□□ -1.74
TRAV28-201ENST00000557548 ZNF526Q8TF50 670 aaPredicted RBP4.16□□□□□ -1.74
TRAV28-201ENST00000557548 WNK4Q96J92 1243 aa4.16□□□□□ -1.74
TRAV28-201ENST00000557548 CCDC140Q96MF4 163 aa4.16□□□□□ -1.74
TRAV28-201ENST00000557548 RTFDC1Q9BY42 306 aaPredicted RBP4.16□□□□□ -1.74
TRAV28-201ENST00000557548 PUS7LQ9H0K6 701 aaKnown RBP4.16□□□□□ -1.74
TRAV28-201ENST00000557548 CDH19Q9H159 772 aa4.16□□□□□ -1.74
TRAV28-201ENST00000557548 CRTAC1Q9NQ79 661 aa4.16□□□□□ -1.74
TRAV28-201ENST00000557548 CYP26B1Q9NR63 512 aa4.16□□□□□ -1.74
TRAV28-201ENST00000557548 SAMD15Q9P1V8 674 aa4.16□□□□□ -1.74
TRAV28-201ENST00000557548 NOB1Q9ULX3 412 aaKnown RBP4.16□□□□□ -1.74
TRAV28-201ENST00000557548 APOBEC2Q9Y235 224 aaKnown RBP4.16□□□□□ -1.74
TRAV28-201ENST00000557548 DIS3Q9Y2L1 958 aaKnown RBP4.16□□□□□ -1.74
TRAV28-201ENST00000557548 DAGLAQ9Y4D2 1042 aa4.16□□□□□ -1.74
TRAV28-201ENST00000557548 H0Y8X5 98 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 FAM229AH3BQW9 127 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 MEIS1O00470 390 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 AQP7O14520 342 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 GABRDO14764 452 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 CAND2O75155 1236 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 GLRX3O76003 335 aaKnown RBP4.15□□□□□ -1.75
TRAV28-201ENST00000557548 CPP00450 1065 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 SCG5P05408 212 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 PYGMP11217 842 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 ITIH2P19823 946 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 SSTR4P31391 388 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 PREPP48147 710 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 SCNN1BP51168 640 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 IL2P60568 153 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 GUCY1A3Q02108 690 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 SCRN1Q12765 414 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 BIRC2Q13490 618 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 SYDE2Q5VT97 1194 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 ANKRD34AQ69YU3 496 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 STYK1Q6J9G0 422 aa4.15□□□□□ -1.75
TRAV28-201ENST00000557548 ABHD17CQ6PCB6 329 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms