RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 GPR162Q16538 588 aa14.18□□□□□ -0.14
SHMT2-233ENST00000557529 LETM2Q2VYF4 491 aa14.18□□□□□ -0.14
SHMT2-233ENST00000557529 DTHD1Q6ZMT9 781 aa14.18□□□□□ -0.14
SHMT2-233ENST00000557529 CNNM3Q8NE01 707 aa14.18□□□□□ -0.14
SHMT2-233ENST00000557529 FAM200AQ8TCP9 573 aa14.18□□□□□ -0.14
SHMT2-233ENST00000557529 WRNIP1Q96S55 665 aa14.18□□□□□ -0.14
SHMT2-233ENST00000557529 RANBP17Q9H2T7 1088 aaKnown RBP14.18□□□□□ -0.14
SHMT2-233ENST00000557529 KIAA1468Q9P260 1216 aa14.18□□□□□ -0.14
SHMT2-233ENST00000557529 USP25Q9UHP3 1055 aa14.18□□□□□ -0.14
SHMT2-233ENST00000557529 NEMFO60524 1076 aa14.17□□□□□ -0.14
SHMT2-233ENST00000557529 FOSP01100 380 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-233ENST00000557529 OR52Z1P0C646 297 aa14.17□□□□□ -0.14
SHMT2-233ENST00000557529 GCFC2P16383 781 aaKnown RBP14.17□□□□□ -0.14
SHMT2-233ENST00000557529 TXLNAP40222 546 aa14.17□□□□□ -0.14
SHMT2-233ENST00000557529 UBE2SQ16763 222 aa14.17□□□□□ -0.14
SHMT2-233ENST00000557529 SPECC1Q5M775 1068 aa14.17□□□□□ -0.14
SHMT2-233ENST00000557529 NOL9Q5SY16 702 aaKnown RBP14.17□□□□□ -0.14
SHMT2-233ENST00000557529 USP50Q70EL3 339 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-233ENST00000557529 CCDC84Q86UT8 332 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-233ENST00000557529 SULF1Q8IWU6 871 aa14.17□□□□□ -0.14
SHMT2-233ENST00000557529 SYMPKQ92797 1274 aaKnown RBP14.17□□□□□ -0.14
SHMT2-233ENST00000557529 KIFC2Q96AC6 838 aa14.17□□□□□ -0.14
SHMT2-233ENST00000557529 KLRG1Q96E93 195 aa14.17□□□□□ -0.14
SHMT2-233ENST00000557529 PANK2Q9BZ23 570 aa14.17□□□□□ -0.14
SHMT2-233ENST00000557529 ANO10Q9NW15 660 aa14.17□□□□□ -0.14
SHMT2-233ENST00000557529 DOCK1Q14185 1865 aa14.16□□□□□ -0.14
SHMT2-233ENST00000557529 POLR2DO15514 142 aaKnown RBP14.16□□□□□ -0.14
SHMT2-233ENST00000557529 PTPRAP18433 802 aa14.16□□□□□ -0.14
SHMT2-233ENST00000557529 SNAP25P60880 206 aa14.16□□□□□ -0.14
SHMT2-233ENST00000557529 USH1GQ495M9 461 aa14.16□□□□□ -0.14
SHMT2-233ENST00000557529 LONRF3Q496Y0 759 aa14.16□□□□□ -0.14
SHMT2-233ENST00000557529 ANO6Q4KMQ2 910 aa14.16□□□□□ -0.14
SHMT2-233ENST00000557529 PRAMEF18Q5VWM3 479 aa14.16□□□□□ -0.14
SHMT2-233ENST00000557529 PPP4R3AQ6IN85 833 aa14.16□□□□□ -0.14
SHMT2-233ENST00000557529 ZC3H15Q8WU90 426 aaKnown RBP14.16□□□□□ -0.14
SHMT2-233ENST00000557529 PNMA2Q9UL42 364 aa14.16□□□□□ -0.14
SHMT2-233ENST00000557529 PIK3CDO00329 1044 aa14.15□□□□□ -0.14
SHMT2-233ENST00000557529 MEIS2O14770 477 aa14.15□□□□□ -0.14
SHMT2-233ENST00000557529 BACE1P56817 501 aa14.15□□□□□ -0.14
SHMT2-233ENST00000557529 IL17AQ16552 155 aa14.15□□□□□ -0.14
SHMT2-233ENST00000557529 USP49Q70CQ1 688 aa14.15□□□□□ -0.14
SHMT2-233ENST00000557529 PRPF38AQ8NAV1 312 aaKnown RBP14.15□□□□□ -0.14
SHMT2-233ENST00000557529 ZNF280CQ8ND82 737 aa14.15□□□□□ -0.14
SHMT2-233ENST00000557529 EPSTI1Q96J88 318 aa14.15□□□□□ -0.14
SHMT2-233ENST00000557529 AK8Q96MA6 479 aa14.15□□□□□ -0.14
SHMT2-233ENST00000557529 SLF1Q9BQI6 1058 aa14.15□□□□□ -0.14
SHMT2-233ENST00000557529 ANO3Q9BYT9 981 aa14.15□□□□□ -0.14
SHMT2-233ENST00000557529 TMEM60Q9H2L4 133 aa14.15□□□□□ -0.14
SHMT2-233ENST00000557529 MRPL11Q9Y3B7 192 aaKnown RBP14.15□□□□□ -0.14
SHMT2-233ENST00000557529 ABCB11O95342 1321 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 SSC5DA1L4H1 1573 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 SPDYE3A6NKU9 549 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 USP17L15C9J2P7 530 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 C19orf81C9J6K1 198 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 USP17L13C9JLJ4 530 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 USP17L11C9JVI0 530 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 USP17L18D6R9N7 530 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 USP17L22D6RA61 530 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 USP17L17D6RBQ6 530 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 USP17L19D6RCP7 530 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 USP17L20D6RJB6 530 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 SLFN14P0C7P3 912 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 FDX1P10109 184 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 USP11P51784 963 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 CCDC173Q0VFZ6 552 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 USP17L24Q0WX57 530 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 SPP2Q13103 211 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 MTMR2Q13614 643 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 CALCRLQ16602 461 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 USP17L6PQ6QN14 398 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 MOXD1Q6UVY6 613 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 CEP57L1Q8IYX8 460 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 IQUBQ8NA54 791 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 ZKSCAN4Q969J2 545 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-233ENST00000557529 C12orf42Q96LP6 360 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 NAT10Q9H0A0 1025 aaKnown RBP14.14□□□□□ -0.15
SHMT2-233ENST00000557529 SERTAD1Q9UHV2 236 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 TUBE1Q9UJT0 475 aa14.14□□□□□ -0.15
SHMT2-233ENST00000557529 IQCA1LA6NCM1 817 aa14.13□□□□□ -0.15
SHMT2-233ENST00000557529 GLTPD2A6NH11 291 aa14.13□□□□□ -0.15
SHMT2-233ENST00000557529 ACTN4O43707 911 aaKnown RBP14.13□□□□□ -0.15
SHMT2-233ENST00000557529 PPP1R12BO60237 982 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-233ENST00000557529 USP2O75604 605 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-233ENST00000557529 VCAM1P19320 739 aa14.13□□□□□ -0.15
SHMT2-233ENST00000557529 EPHX2P34913 555 aa14.13□□□□□ -0.15
SHMT2-233ENST00000557529 ZNF165P49910 485 aa14.13□□□□□ -0.15
SHMT2-233ENST00000557529 MAP3K9P80192 1104 aa14.13□□□□□ -0.15
SHMT2-233ENST00000557529 POSTNQ15063 836 aa14.13□□□□□ -0.15
SHMT2-233ENST00000557529 TMEM266Q2M3C6 531 aa14.13□□□□□ -0.15
SHMT2-233ENST00000557529 CCDC174Q6PII3 467 aa14.13□□□□□ -0.15
SHMT2-233ENST00000557529 PDILTQ8N807 584 aa14.13□□□□□ -0.15
SHMT2-233ENST00000557529 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.13□□□□□ -0.153e-33■■□□□ 14.1
SHMT2-233ENST00000557529 DHX58Q96C10 678 aa14.13□□□□□ -0.15
SHMT2-233ENST00000557529 RAB34Q9BZG1 259 aa14.13□□□□□ -0.15
SHMT2-233ENST00000557529 TANGO6Q9C0B7 1094 aa14.13□□□□□ -0.15
SHMT2-233ENST00000557529 CCSER1Q9C0I3 900 aa14.13□□□□□ -0.15
SHMT2-233ENST00000557529 DNAJC25Q9H1X3 360 aa14.13□□□□□ -0.15
SHMT2-233ENST00000557529 EMILIN3Q9NT22 766 aa14.13□□□□□ -0.15
SHMT2-233ENST00000557529 FBXO28Q9NVF7 368 aa14.13□□□□□ -0.15
SHMT2-233ENST00000557529 ZHX2Q9Y6X8 837 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms