RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 A0A1B0GUL7 405 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 STXBP3O00186 592 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 MBTPS2O43462 519 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 LTBRP36941 435 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 PTPROQ16827 1216 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 ARMCX2Q7L311 632 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 FRMD5Q7Z6J6 570 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 RPAINQ86UA6 219 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 WWC1Q8IX03 1113 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 NKD2Q969F2 451 aaPredicted RBP11.53□□□□□ -0.56
NEDD1-211ENST00000557454 COL26A1Q96A83 441 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 DDX11Q96FC9 970 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 FGD4Q96M96 766 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 CRBNQ96SW2 442 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 RAD9AQ99638 391 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 USP44Q9H0E7 712 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 EHD4Q9H223 541 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 FBXO28Q9NVF7 368 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 ZNF214Q9UL59 606 aaPredicted RBP11.53□□□□□ -0.56
NEDD1-211ENST00000557454 CDK5RAP2Q96SN8 1893 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 PTPRSQ13332 1948 aa11.52□□□□□ -0.56
NEDD1-211ENST00000557454 MPHOSPH10O00566 681 aaKnown RBP11.52□□□□□ -0.57
NEDD1-211ENST00000557454 GALR2O43603 387 aaPredicted RBP11.52□□□□□ -0.57
NEDD1-211ENST00000557454 GJB5O95377 273 aa11.52□□□□□ -0.57
NEDD1-211ENST00000557454 IQCF3P0C7M6 154 aa11.52□□□□□ -0.57
NEDD1-211ENST00000557454 SUPT20HL2P0C7V6 817 aa11.52□□□□□ -0.57
NEDD1-211ENST00000557454 COPB2P35606 906 aa11.52□□□□□ -0.57
NEDD1-211ENST00000557454 DYNLL1P63167 89 aaKnown RBP11.52□□□□□ -0.57
NEDD1-211ENST00000557454 TNFAIP2Q03169 654 aa11.52□□□□□ -0.57
NEDD1-211ENST00000557454 SIGLEC14Q08ET2 396 aa11.52□□□□□ -0.57
NEDD1-211ENST00000557454 FAM117BQ6P1L5 589 aa11.52□□□□□ -0.57
NEDD1-211ENST00000557454 ZNF467Q7Z7K2 595 aaPredicted RBP11.52□□□□□ -0.57
NEDD1-211ENST00000557454 TET1Q8NFU7 2136 aa11.52□□□□□ -0.57
NEDD1-211ENST00000557454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.52□□□□□ -0.57
NEDD1-211ENST00000557454 ASIC4Q96FT7 647 aa11.52□□□□□ -0.57
NEDD1-211ENST00000557454 KATNBL1Q9H079 304 aa11.52□□□□□ -0.57
NEDD1-211ENST00000557454 CTNNA3Q9UI47 895 aa11.52□□□□□ -0.57
NEDD1-211ENST00000557454 ADAMTS5Q9UNA0 930 aa11.52□□□□□ -0.57
NEDD1-211ENST00000557454 CEP250Q9BV73 2442 aa11.52□□□□□ -0.57
NEDD1-211ENST00000557454 IL16Q14005 1332 aa11.52□□□□□ -0.57
NEDD1-211ENST00000557454 SIP14410 1827 aa11.51□□□□□ -0.57
NEDD1-211ENST00000557454 FOCADQ5VW36 1801 aa11.51□□□□□ -0.57
NEDD1-211ENST00000557454 VWA5AO00534 786 aa11.51□□□□□ -0.57
NEDD1-211ENST00000557454 ZEB2O60315 1214 aa11.51□□□□□ -0.57
NEDD1-211ENST00000557454 MCAMP43121 646 aa11.51□□□□□ -0.57
NEDD1-211ENST00000557454 DLX2Q07687 328 aaPredicted RBP11.51□□□□□ -0.57
NEDD1-211ENST00000557454 CLEC10AQ8IUN9 316 aa11.51□□□□□ -0.57
NEDD1-211ENST00000557454 MAGEB6Q8N7X4 407 aa11.51□□□□□ -0.57
NEDD1-211ENST00000557454 REPS2Q8NFH8 660 aa11.51□□□□□ -0.57
NEDD1-211ENST00000557454 NSUN3Q9H649 340 aaKnown RBP11.51□□□□□ -0.57
NEDD1-211ENST00000557454 GNEQ9Y223 722 aaKnown RBP11.51□□□□□ -0.57
NEDD1-211ENST00000557454 USP24Q9UPU5 2620 aa11.5□□□□□ -0.57
NEDD1-211ENST00000557454 MYO7AQ13402 2215 aa11.5□□□□□ -0.57
NEDD1-211ENST00000557454 RBAK-RBAKDNI3L0D1 243 aa11.5□□□□□ -0.57
NEDD1-211ENST00000557454 PITPNM1O00562 1244 aa11.5□□□□□ -0.57
NEDD1-211ENST00000557454 WDR46O15213 610 aaKnown RBP11.5□□□□□ -0.57
NEDD1-211ENST00000557454 DYNC1LI2O43237 492 aaPredicted RBP11.5□□□□□ -0.57
NEDD1-211ENST00000557454 PDGFBP01127 241 aaPredicted RBP11.5□□□□□ -0.57
NEDD1-211ENST00000557454 SMAD4Q13485 552 aaKnown RBP11.5□□□□□ -0.57
NEDD1-211ENST00000557454 CCDC144CPQ8IYA2 1237 aa11.5□□□□□ -0.57
NEDD1-211ENST00000557454 RETREG2Q8NC44 543 aa11.5□□□□□ -0.57
NEDD1-211ENST00000557454 AP5M1Q9H0R1 490 aa11.5□□□□□ -0.57
NEDD1-211ENST00000557454 VCPKMTQ9H867 229 aa11.5□□□□□ -0.57
NEDD1-211ENST00000557454 RALYQ9UKM9 306 aaKnown RBP11.5□□□□□ -0.57
NEDD1-211ENST00000557454 ANKRD11Q6UB99 2663 aaPredicted RBP11.5□□□□□ -0.57
NEDD1-211ENST00000557454 COL11A1P12107 1806 aaPredicted RBP11.49□□□□□ -0.57
NEDD1-211ENST00000557454 TANC1Q9C0D5 1861 aa11.49□□□□□ -0.57
NEDD1-211ENST00000557454 ARID4AP29374 1257 aaPredicted RBP11.49□□□□□ -0.57
NEDD1-211ENST00000557454 USP5P45974 858 aa11.49□□□□□ -0.57
NEDD1-211ENST00000557454 PLCD1P51178 756 aa11.49□□□□□ -0.57
NEDD1-211ENST00000557454 NUBP1P53384 320 aa11.49□□□□□ -0.57
NEDD1-211ENST00000557454 ST3GAL2Q16842 350 aa11.49□□□□□ -0.57
NEDD1-211ENST00000557454 SNRNP48Q6IEG0 339 aaKnown RBP11.49□□□□□ -0.57
NEDD1-211ENST00000557454 PPP1R13LQ8WUF5 828 aa11.49□□□□□ -0.57
NEDD1-211ENST00000557454 NEUROD6Q96NK8 337 aa11.49□□□□□ -0.57
NEDD1-211ENST00000557454 PPP1R9AQ9ULJ8 1098 aa11.49□□□□□ -0.57
NEDD1-211ENST00000557454 RIPK3Q9Y572 518 aa11.49□□□□□ -0.57
NEDD1-211ENST00000557454 FASNP49327 2511 aaKnown RBP11.48□□□□□ -0.57
NEDD1-211ENST00000557454 TBX10O75333 385 aa11.48□□□□□ -0.57
NEDD1-211ENST00000557454 SMPD1P17405 629 aa11.48□□□□□ -0.57
NEDD1-211ENST00000557454 TFCP2Q12800 502 aa11.48□□□□□ -0.57
NEDD1-211ENST00000557454 TCTN1Q2MV58 587 aa11.48□□□□□ -0.57
NEDD1-211ENST00000557454 CTC1Q2NKJ3 1217 aa11.48□□□□□ -0.57
NEDD1-211ENST00000557454 NBPF20Q3BBV1 942 aa11.48□□□□□ -0.57
NEDD1-211ENST00000557454 EPC2Q52LR7 807 aa11.48□□□□□ -0.57
NEDD1-211ENST00000557454 FAM47CQ5HY64 1035 aa11.48□□□□□ -0.57
NEDD1-211ENST00000557454 GORABQ5T7V8 394 aa11.48□□□□□ -0.57
NEDD1-211ENST00000557454 MCTP2Q6DN12 878 aa11.48□□□□□ -0.57
NEDD1-211ENST00000557454 TTC6Q86TZ1 520 aa11.48□□□□□ -0.57
NEDD1-211ENST00000557454 TEX13BQ9BXU2 312 aa11.48□□□□□ -0.57
NEDD1-211ENST00000557454 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.48□□□□□ -0.57
NEDD1-211ENST00000557454 PARP14Q460N5 1801 aa11.48□□□□□ -0.57
NEDD1-211ENST00000557454 MCM3APO60318 1980 aa11.48□□□□□ -0.57
NEDD1-211ENST00000557454 LOC730098B7Z3J9 87 aa11.47□□□□□ -0.57
NEDD1-211ENST00000557454 SLC4A3P48751 1232 aa11.47□□□□□ -0.57
NEDD1-211ENST00000557454 EVX2Q03828 476 aa11.47□□□□□ -0.57
NEDD1-211ENST00000557454 ICA1Q05084 483 aa11.47□□□□□ -0.57
NEDD1-211ENST00000557454 GPM6BQ13491 265 aa11.47□□□□□ -0.57
NEDD1-211ENST00000557454 PUM1Q14671 1186 aaKnown RBP eCLIP11.47□□□□□ -0.57
NEDD1-211ENST00000557454 GPNMBQ14956 572 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms