RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 GLT1D1Q96MS3 346 aa16.68■□□□□ 0.26
SNX6-210ENST00000557341 TTC14Q96N46 770 aa16.68■□□□□ 0.26
SNX6-210ENST00000557341 UPF3AQ9H1J1 476 aaKnown RBP16.68■□□□□ 0.26
SNX6-210ENST00000557341 CYP39A1Q9NYL5 469 aa16.68■□□□□ 0.26
SNX6-210ENST00000557341 NEDD4P46934 1319 aa16.68■□□□□ 0.26
SNX6-210ENST00000557341 TRIM43BA6NCK2 446 aa16.67■□□□□ 0.26
SNX6-210ENST00000557341 MYADML2A6NDP7 307 aa16.67■□□□□ 0.26
SNX6-210ENST00000557341 SOWAHBA6NEL2 793 aa16.67■□□□□ 0.26
SNX6-210ENST00000557341 ZNF213O14771 459 aa16.67■□□□□ 0.26
SNX6-210ENST00000557341 SLC16A2P36021 539 aa16.67■□□□□ 0.26
SNX6-210ENST00000557341 GJA9P57773 515 aa16.67■□□□□ 0.26
SNX6-210ENST00000557341 CCSAPQ6IQ19 270 aaPredicted RBP16.67■□□□□ 0.26
SNX6-210ENST00000557341 TTBK2Q6IQ55 1244 aa16.67■□□□□ 0.26
SNX6-210ENST00000557341 TRIM43Q96BQ3 446 aaPredicted RBP16.67■□□□□ 0.26
SNX6-210ENST00000557341 ASTN1O14525 1302 aa16.67■□□□□ 0.26
SNX6-210ENST00000557341 MROH7Q68CQ1 1323 aa16.67■□□□□ 0.26
SNX6-210ENST00000557341 ASGR1P07306 291 aa16.66■□□□□ 0.26
SNX6-210ENST00000557341 NSMFQ6X4W1 530 aa16.66■□□□□ 0.26
SNX6-210ENST00000557341 Q7L0L9 218 aa16.66■□□□□ 0.26
SNX6-210ENST00000557341 ANKRD33Q7Z3H0 272 aa16.66■□□□□ 0.26
SNX6-210ENST00000557341 GBF1Q92538 1859 aa16.66■□□□□ 0.26
SNX6-210ENST00000557341 GPCPD1Q9NPB8 672 aa16.66■□□□□ 0.26
SNX6-210ENST00000557341 PNMA2Q9UL42 364 aa16.66■□□□□ 0.26
SNX6-210ENST00000557341 ELP1O95163 1332 aa16.66■□□□□ 0.26
SNX6-210ENST00000557341 CDH23Q9H251 3354 aa16.65■□□□□ 0.26
SNX6-210ENST00000557341 DCDC2CA8MYV0 355 aa16.65■□□□□ 0.26
SNX6-210ENST00000557341 KIAA0355O15063 1070 aa16.65■□□□□ 0.26
SNX6-210ENST00000557341 RAG1P15918 1043 aa16.65■□□□□ 0.26
SNX6-210ENST00000557341 TNFAIP2Q03169 654 aa16.65■□□□□ 0.26
SNX6-210ENST00000557341 ZNF543Q08ER8 600 aa16.65■□□□□ 0.26
SNX6-210ENST00000557341 GNASQ5JWF2 1037 aa16.65■□□□□ 0.26
SNX6-210ENST00000557341 TLK2Q86UE8 772 aa16.65■□□□□ 0.26
SNX6-210ENST00000557341 IQCA1Q86XH1 822 aa16.65■□□□□ 0.26
SNX6-210ENST00000557341 TOX2Q96NM4 488 aa16.65■□□□□ 0.26
SNX6-210ENST00000557341 DSCC1Q9BVC3 393 aa16.65■□□□□ 0.26
SNX6-210ENST00000557341 EYSQ5T1H1 3165 aa16.64■□□□□ 0.25
SNX6-210ENST00000557341 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.64■□□□□ 0.25
SNX6-210ENST00000557341 SNHG28P0DPA3 235 aa16.64■□□□□ 0.25
SNX6-210ENST00000557341 NKX3-2P78367 333 aa16.64■□□□□ 0.25
SNX6-210ENST00000557341 IRX5P78411 483 aaPredicted RBP16.64■□□□□ 0.25
SNX6-210ENST00000557341 FAAP100Q0VG06 881 aa16.64■□□□□ 0.25
SNX6-210ENST00000557341 SHHQ15465 462 aa16.64■□□□□ 0.25
SNX6-210ENST00000557341 C9orf50Q5SZB4 431 aa16.64■□□□□ 0.25
SNX6-210ENST00000557341 GPATCH4Q5T3I0 446 aaKnown RBP16.64■□□□□ 0.25
SNX6-210ENST00000557341 NOL8Q76FK4 1167 aaKnown RBP16.64■□□□□ 0.25
SNX6-210ENST00000557341 ZKSCAN3Q9BRR0 538 aa16.64■□□□□ 0.25
SNX6-210ENST00000557341 TMEM39AQ9NV64 488 aa16.64■□□□□ 0.25
SNX6-210ENST00000557341 ADD3Q9UEY8 706 aaKnown RBP16.64■□□□□ 0.25
SNX6-210ENST00000557341 UNC80Q8N2C7 3258 aa16.64■□□□□ 0.25
SNX6-210ENST00000557341 WDR19Q8NEZ3 1342 aa16.64■□□□□ 0.25
SNX6-210ENST00000557341 TANC1Q9C0D5 1861 aa16.63■□□□□ 0.25
SNX6-210ENST00000557341 A0A0U1RQG5 324 aaPredicted RBP16.63■□□□□ 0.25
SNX6-210ENST00000557341 NFIBO00712 420 aa16.63■□□□□ 0.25
SNX6-210ENST00000557341 KDM4AO75164 1064 aa16.63■□□□□ 0.25
SNX6-210ENST00000557341 ITGB8P26012 769 aa16.63■□□□□ 0.25
SNX6-210ENST00000557341 ALDH5A1P51649 535 aaPredicted RBP16.63■□□□□ 0.25
SNX6-210ENST00000557341 IMMTQ16891 758 aaKnown RBP16.63■□□□□ 0.25
SNX6-210ENST00000557341 CCDC178Q5BJE1 867 aa16.63■□□□□ 0.25
SNX6-210ENST00000557341 DGKHQ86XP1 1220 aa16.63■□□□□ 0.25
SNX6-210ENST00000557341 FBXO16Q8IX29 292 aaPredicted RBP16.63■□□□□ 0.25
SNX6-210ENST00000557341 VTA1Q9NP79 307 aa16.63■□□□□ 0.25
SNX6-210ENST00000557341 MTMR10Q9NXD2 777 aa16.63■□□□□ 0.25
SNX6-210ENST00000557341 GNEQ9Y223 722 aaKnown RBP16.63■□□□□ 0.25
SNX6-210ENST00000557341 SUPT16HQ9Y5B9 1047 aaKnown RBP16.63■□□□□ 0.25
SNX6-210ENST00000557341 LOC102724159A0A0B4J2E5 919 aa16.62■□□□□ 0.25
SNX6-210ENST00000557341 PTPDC1A2A3K4 754 aa16.62■□□□□ 0.25
SNX6-210ENST00000557341 B4E1Z4 1266 aa16.62■□□□□ 0.25
SNX6-210ENST00000557341 CTAGE5O15320 804 aa16.62■□□□□ 0.25
SNX6-210ENST00000557341 BEX3Q00994 111 aa16.62■□□□□ 0.25
SNX6-210ENST00000557341 FPGSQ05932 587 aa16.62■□□□□ 0.25
SNX6-210ENST00000557341 BAATQ14032 418 aaPredicted RBP16.62■□□□□ 0.25
SNX6-210ENST00000557341 PWP2Q15269 919 aaKnown RBP16.62■□□□□ 0.25
SNX6-210ENST00000557341 FAM109BQ6ICB4 259 aaPredicted RBP16.62■□□□□ 0.25
SNX6-210ENST00000557341 SLC30A10Q6XR72 485 aa16.62■□□□□ 0.25
SNX6-210ENST00000557341 EEPD1Q7L9B9 569 aa16.62■□□□□ 0.25
SNX6-210ENST00000557341 PNMA1Q8ND90 353 aa16.62■□□□□ 0.25
SNX6-210ENST00000557341 MORC4Q8TE76 937 aa16.62■□□□□ 0.25
SNX6-210ENST00000557341 VTI1AQ96AJ9 217 aa16.62■□□□□ 0.25
SNX6-210ENST00000557341 KAT14Q9H8E8 782 aa16.62■□□□□ 0.25
SNX6-210ENST00000557341 CTNNA3Q9UI47 895 aa16.62■□□□□ 0.25
SNX6-210ENST00000557341 STXBP5LQ9Y2K9 1186 aa16.62■□□□□ 0.25
SNX6-210ENST00000557341 DDX49Q9Y6V7 483 aaKnown RBP16.62■□□□□ 0.25
SNX6-210ENST00000557341 SCN10AQ9Y5Y9 1956 aa16.62■□□□□ 0.25
SNX6-210ENST00000557341 MYH7BA7E2Y1 1941 aa16.61■□□□□ 0.25
SNX6-210ENST00000557341 ARVCFO00192 962 aa16.61■□□□□ 0.25
SNX6-210ENST00000557341 SMPD1P17405 629 aa16.61■□□□□ 0.25
SNX6-210ENST00000557341 CDK7P50613 346 aa16.61■□□□□ 0.25
SNX6-210ENST00000557341 FSCN1Q16658 493 aaKnown RBP16.61■□□□□ 0.25
SNX6-210ENST00000557341 ZNF697Q5TEC3 545 aa16.61■□□□□ 0.25
SNX6-210ENST00000557341 IQSEC1Q6DN90 963 aa16.61■□□□□ 0.25
SNX6-210ENST00000557341 RNF207Q6ZRF8 634 aa16.61■□□□□ 0.25
SNX6-210ENST00000557341 PURBQ96QR8 312 aaKnown RBP16.61■□□□□ 0.25
SNX6-210ENST00000557341 AP5M1Q9H0R1 490 aa16.61■□□□□ 0.25
SNX6-210ENST00000557341 TBX21Q9UL17 535 aa16.61■□□□□ 0.25
SNX6-210ENST00000557341 RAD50Q92878 1312 aa16.61■□□□□ 0.25
SNX6-210ENST00000557341 TLR3O15455 904 aaKnown RBP16.6■□□□□ 0.25
SNX6-210ENST00000557341 ZEB2O60315 1214 aa16.6■□□□□ 0.25
SNX6-210ENST00000557341 CABYRO75952 493 aa16.6■□□□□ 0.25
SNX6-210ENST00000557341 GOLGA8HP0CJ92 632 aa16.6■□□□□ 0.25
SNX6-210ENST00000557341 CALML3P27482 149 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms