RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 C5orf42Q9H799 3197 aa15.18■□□□□ 0.02
PSEN1-220ENST00000557037 WDR87Q6ZQQ6 2873 aa15.18■□□□□ 0.02
PSEN1-220ENST00000557037 LINC01553A4QN01 128 aa15.17■□□□□ 0.02
PSEN1-220ENST00000557037 TMEM221A6NGB7 291 aa15.17■□□□□ 0.02
PSEN1-220ENST00000557037 RBAK-RBAKDNI3L0D1 243 aa15.17■□□□□ 0.02
PSEN1-220ENST00000557037 M0R296 226 aa15.17■□□□□ 0.02
PSEN1-220ENST00000557037 WDR5P61964 334 aaKnown RBP15.17■□□□□ 0.02
PSEN1-220ENST00000557037 DEFB103AP81534 67 aa15.17■□□□□ 0.02
PSEN1-220ENST00000557037 CNTN2Q02246 1040 aa15.17■□□□□ 0.02
PSEN1-220ENST00000557037 G3BP1Q13283 466 aaKnown RBP eCLIP15.17■□□□□ 0.02
PSEN1-220ENST00000557037 HERC4Q5GLZ8 1057 aaPredicted RBP15.17■□□□□ 0.02
PSEN1-220ENST00000557037 CERS3Q8IU89 383 aa15.17■□□□□ 0.02
PSEN1-220ENST00000557037 RNF135Q8IUD6 432 aa15.17■□□□□ 0.02
PSEN1-220ENST00000557037 SUGP1Q8IWZ8 645 aaKnown RBP15.17■□□□□ 0.02
PSEN1-220ENST00000557037 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.17■□□□□ 0.02
PSEN1-220ENST00000557037 NUP88Q99567 741 aaPredicted RBP15.17■□□□□ 0.02
PSEN1-220ENST00000557037 PRRX2Q99811 253 aa15.17■□□□□ 0.02
PSEN1-220ENST00000557037 BAIAP3O94812 1187 aa15.16■□□□□ 0.02
PSEN1-220ENST00000557037 EEF2P13639 858 aaKnown RBP15.16■□□□□ 0.02
PSEN1-220ENST00000557037 FAM47CQ5HY64 1035 aa15.16■□□□□ 0.02
PSEN1-220ENST00000557037 FAM117BQ6P1L5 589 aa15.16■□□□□ 0.02
PSEN1-220ENST00000557037 ERMP1Q7Z2K6 904 aa15.16■□□□□ 0.02
PSEN1-220ENST00000557037 EDAQ92838 391 aa15.16■□□□□ 0.02
PSEN1-220ENST00000557037 CRBNQ96SW2 442 aa15.16■□□□□ 0.02
PSEN1-220ENST00000557037 SLF1Q9BQI6 1058 aa15.16■□□□□ 0.02
PSEN1-220ENST00000557037 PDGFCQ9NRA1 345 aa15.16■□□□□ 0.02
PSEN1-220ENST00000557037 NAV1Q8NEY1 1877 aa15.16■□□□□ 0.02
PSEN1-220ENST00000557037 SOWAHBA6NEL2 793 aa15.15■□□□□ 0.02
PSEN1-220ENST00000557037 KRT37O76014 449 aa15.15■□□□□ 0.02
PSEN1-220ENST00000557037 CLUL1Q15846 466 aa15.15■□□□□ 0.02
PSEN1-220ENST00000557037 TRIM67Q6ZTA4 783 aa15.15■□□□□ 0.02
PSEN1-220ENST00000557037 BMP8AQ7Z5Y6 402 aa15.15■□□□□ 0.02
PSEN1-220ENST00000557037 FBXO22Q8NEZ5 403 aa15.15■□□□□ 0.02
PSEN1-220ENST00000557037 RAD9AQ99638 391 aa15.15■□□□□ 0.02
PSEN1-220ENST00000557037 C17orf80Q9BSJ5 609 aa15.15■□□□□ 0.02
PSEN1-220ENST00000557037 RAVER2Q9HCJ3 691 aaKnown RBP15.15■□□□□ 0.02
PSEN1-220ENST00000557037 TCEAL5Q5H9L2 206 aa15.14■□□□□ 0.01
PSEN1-220ENST00000557037 EEPD1Q7L9B9 569 aa15.14■□□□□ 0.01
PSEN1-220ENST00000557037 PABPC5Q96DU9 382 aaKnown RBP15.14■□□□□ 0.01
PSEN1-220ENST00000557037 MRPL38Q96DV4 380 aaKnown RBP15.14■□□□□ 0.01
PSEN1-220ENST00000557037 RIOK1Q9BRS2 568 aaKnown RBP15.14■□□□□ 0.01
PSEN1-220ENST00000557037 GOPCQ9HD26 462 aa15.14■□□□□ 0.01
PSEN1-220ENST00000557037 ALG13Q9NP73 1137 aaKnown RBP15.14■□□□□ 0.01
PSEN1-220ENST00000557037 HOMER2Q9NSB8 354 aa15.14■□□□□ 0.01
PSEN1-220ENST00000557037 SIP14410 1827 aa15.14■□□□□ 0.01
PSEN1-220ENST00000557037 MAGEB6P1A0A0J9YX57 407 aa15.13■□□□□ 0.01
PSEN1-220ENST00000557037 MYL3P08590 195 aa15.13■□□□□ 0.01
PSEN1-220ENST00000557037 TNNI3KQ59H18 835 aa15.13■□□□□ 0.01
PSEN1-220ENST00000557037 ASCL5Q7RTU5 278 aa15.13■□□□□ 0.01
PSEN1-220ENST00000557037 FBXO16Q8IX29 292 aaPredicted RBP15.13■□□□□ 0.01
PSEN1-220ENST00000557037 BANK1Q8NDB2 785 aa15.13■□□□□ 0.01
PSEN1-220ENST00000557037 CLDND1Q9NY35 253 aa15.13■□□□□ 0.01
PSEN1-220ENST00000557037 SWAP70Q9UH65 585 aa15.13■□□□□ 0.01
PSEN1-220ENST00000557037 CTDP1Q9Y5B0 961 aaPredicted RBP15.13■□□□□ 0.01
PSEN1-220ENST00000557037 FPGT-TNNI3KV9GXZ4 949 aa15.13■□□□□ 0.01
PSEN1-220ENST00000557037 MYH8P13535 1937 aa15.13■□□□□ 0.01
PSEN1-220ENST00000557037 TRIP12Q14669 1992 aaPredicted RBP15.13■□□□□ 0.01
PSEN1-220ENST00000557037 PITPNM1O00562 1244 aa15.12■□□□□ 0.01
PSEN1-220ENST00000557037 IGSF3O75054 1194 aa15.12■□□□□ 0.01
PSEN1-220ENST00000557037 ZBED4O75132 1171 aa15.12■□□□□ 0.01
PSEN1-220ENST00000557037 GJB5O95377 273 aa15.12■□□□□ 0.01
PSEN1-220ENST00000557037 ID4P47928 161 aa15.12■□□□□ 0.01
PSEN1-220ENST00000557037 VCPP55072 806 aaKnown RBP15.12■□□□□ 0.01
PSEN1-220ENST00000557037 MTX1Q13505 466 aa15.12■□□□□ 0.01
PSEN1-220ENST00000557037 PKN1Q16512 942 aa15.12■□□□□ 0.01
PSEN1-220ENST00000557037 FBXL6Q8N531 539 aa15.12■□□□□ 0.01
PSEN1-220ENST00000557037 SDR42E1Q8WUS8 393 aa15.12■□□□□ 0.01
PSEN1-220ENST00000557037 CRNKL1Q9BZJ0 848 aaKnown RBP15.12■□□□□ 0.01
PSEN1-220ENST00000557037 ANTXR1Q9H6X2 564 aa15.12■□□□□ 0.01
PSEN1-220ENST00000557037 SMC4Q9NTJ3 1288 aa15.12■□□□□ 0.01
PSEN1-220ENST00000557037 PLXNA3P51805 1871 aa15.12■□□□□ 0.01
PSEN1-220ENST00000557037 KMT2EQ8IZD2 1858 aa15.12■□□□□ 0.01
PSEN1-220ENST00000557037 TANC1Q9C0D5 1861 aa15.12■□□□□ 0.01
PSEN1-220ENST00000557037 H0Y858 1186 aa15.11■□□□□ 0.01
PSEN1-220ENST00000557037 RGS20O76081 388 aa15.11■□□□□ 0.01
PSEN1-220ENST00000557037 BFSP2Q13515 415 aa15.11■□□□□ 0.01
PSEN1-220ENST00000557037 PTPROQ16827 1216 aa15.11■□□□□ 0.01
PSEN1-220ENST00000557037 TCTN1Q2MV58 587 aa15.11■□□□□ 0.01
PSEN1-220ENST00000557037 NBPF20Q3BBV1 942 aa15.11■□□□□ 0.01
PSEN1-220ENST00000557037 TIGD5Q53EQ6 642 aa15.11■□□□□ 0.01
PSEN1-220ENST00000557037 FAM133AQ8N9E0 248 aa15.11■□□□□ 0.01
PSEN1-220ENST00000557037 POP1Q99575 1024 aaKnown RBP15.11■□□□□ 0.01
PSEN1-220ENST00000557037 TLR9Q9NR96 1032 aa15.11■□□□□ 0.01
PSEN1-220ENST00000557037 CTNNA3Q9UI47 895 aa15.11■□□□□ 0.01
PSEN1-220ENST00000557037 COL4A6Q14031 1691 aa15.11■□□□□ 0.01
PSEN1-220ENST00000557037 EP300Q09472 2414 aaPredicted RBP15.11■□□□□ 0.01
PSEN1-220ENST00000557037 CYP2D7A0A087X1C5 515 aa15.1■□□□□ 0.01
PSEN1-220ENST00000557037 LTBRP36941 435 aa15.1■□□□□ 0.01
PSEN1-220ENST00000557037 PURAQ00577 322 aaKnown RBP15.1■□□□□ 0.01
PSEN1-220ENST00000557037 SMAD2Q15796 467 aaKnown RBP15.1■□□□□ 0.01
PSEN1-220ENST00000557037 IQSEC1Q6DN90 963 aa15.1■□□□□ 0.01
PSEN1-220ENST00000557037 TAPT1Q6NXT6 567 aa15.1■□□□□ 0.01
PSEN1-220ENST00000557037 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.1■□□□□ 0.01
PSEN1-220ENST00000557037 RPAINQ86UA6 219 aa15.1■□□□□ 0.01
PSEN1-220ENST00000557037 CHST13Q8NET6 341 aa15.1■□□□□ 0.01
PSEN1-220ENST00000557037 KIFC2Q96AC6 838 aa15.1■□□□□ 0.01
PSEN1-220ENST00000557037 ZNF512BQ96KM6 892 aaPredicted RBP15.1■□□□□ 0.01
PSEN1-220ENST00000557037 KANSL2Q9H9L4 492 aa15.1■□□□□ 0.01
PSEN1-220ENST00000557037 DCP1AQ9NPI6 582 aaPredicted RBP15.1■□□□□ 0.01
PSEN1-220ENST00000557037 POLR3EQ9NVU0 708 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms