RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 TSPYL6Q8N831 410 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 NKD2Q969F2 451 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-245ENST00000556958 NOC4LQ9BVI4 516 aaKnown RBP7.11□□□□□ -1.27
ATXN3-245ENST00000556958 KIAA1683Q9H0B3 1180 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 SIL1Q9H173 461 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 TLR9Q9NR96 1032 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 ABCF2Q9UG63 623 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 ZBTB21Q9ULJ3 1066 aa7.11□□□□□ -1.27
ATXN3-245ENST00000556958 ROBO3Q96MS0 1386 aa7.1□□□□□ -1.27
ATXN3-245ENST00000556958 TPRP12270 2363 aaKnown RBP7.1□□□□□ -1.27
ATXN3-245ENST00000556958 MROH7-TTC4A0A0A0MT08 1334 aa7.1□□□□□ -1.27
ATXN3-245ENST00000556958 H3BQ06 376 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-245ENST00000556958 GDF11O95390 407 aa7.1□□□□□ -1.27
ATXN3-245ENST00000556958 SUPT20HL2P0C7V6 817 aa7.1□□□□□ -1.27
ATXN3-245ENST00000556958 TAL1P17542 331 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-245ENST00000556958 VCAM1P19320 739 aa7.1□□□□□ -1.27
ATXN3-245ENST00000556958 LORP23490 312 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-245ENST00000556958 NBL1P41271 181 aa7.1□□□□□ -1.27
ATXN3-245ENST00000556958 PUM1Q14671 1186 aaKnown RBP eCLIP7.1□□□□□ -1.27
ATXN3-245ENST00000556958 KCTD2Q14681 263 aa7.1□□□□□ -1.27
ATXN3-245ENST00000556958 MCTP2Q6DN12 878 aa7.1□□□□□ -1.27
ATXN3-245ENST00000556958 EP400NLQ6ZTU2 488 aa7.1□□□□□ -1.27
ATXN3-245ENST00000556958 METTL16Q86W50 562 aaKnown RBP7.1□□□□□ -1.27
ATXN3-245ENST00000556958 ADSSL1Q8N142 457 aa7.1□□□□□ -1.27
ATXN3-245ENST00000556958 SLC43A3Q8NBI5 491 aa7.1□□□□□ -1.27
ATXN3-245ENST00000556958 GDPD5Q8WTR4 605 aa7.1□□□□□ -1.27
ATXN3-245ENST00000556958 TGS1Q96RS0 853 aaKnown RBP7.1□□□□□ -1.27
ATXN3-245ENST00000556958 NOL10Q9BSC4 688 aaKnown RBP7.1□□□□□ -1.27
ATXN3-245ENST00000556958 RPAP3Q9H6T3 665 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-245ENST00000556958 SUGCTQ9HAC7 445 aa7.1□□□□□ -1.27
ATXN3-245ENST00000556958 TOR4AQ9NXH8 423 aa7.1□□□□□ -1.27
ATXN3-245ENST00000556958 BAHCC1Q9P281 2608 aa7.1□□□□□ -1.27
ATXN3-245ENST00000556958 C5orf42Q9H799 3197 aa7.1□□□□□ -1.27
ATXN3-245ENST00000556958 UMODL1Q5DID0 1318 aa7.09□□□□□ -1.27
ATXN3-245ENST00000556958 ZEB2O60315 1214 aa7.09□□□□□ -1.27
ATXN3-245ENST00000556958 ALDH1L1O75891 902 aa7.09□□□□□ -1.27
ATXN3-245ENST00000556958 GH2P01242 217 aa7.09□□□□□ -1.27
ATXN3-245ENST00000556958 RFC2P35250 354 aa7.09□□□□□ -1.27
ATXN3-245ENST00000556958 KCNJ6P48051 423 aa7.09□□□□□ -1.27
ATXN3-245ENST00000556958 SMCPP49901 116 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-245ENST00000556958 GJA9P57773 515 aa7.09□□□□□ -1.27
ATXN3-245ENST00000556958 JAG1P78504 1218 aa7.09□□□□□ -1.27
ATXN3-245ENST00000556958 COL9A2Q14055 689 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-245ENST00000556958 WDR43Q15061 677 aaKnown RBP eCLIP7.09□□□□□ -1.27
ATXN3-245ENST00000556958 CTC1Q2NKJ3 1217 aa7.09□□□□□ -1.27
ATXN3-245ENST00000556958 TWISTNBQ3B726 338 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-245ENST00000556958 ERICH6Q7L0X2 663 aa7.09□□□□□ -1.27
ATXN3-245ENST00000556958 DEFB128Q7Z7B8 93 aa7.09□□□□□ -1.27
ATXN3-245ENST00000556958 TEX11Q8IYF3 940 aa7.09□□□□□ -1.27
ATXN3-245ENST00000556958 PABPC5Q96DU9 382 aaKnown RBP7.09□□□□□ -1.27
ATXN3-245ENST00000556958 SCLYQ96I15 445 aa7.09□□□□□ -1.27
ATXN3-245ENST00000556958 MMP19Q99542 508 aa7.09□□□□□ -1.27
ATXN3-245ENST00000556958 PRR14Q9BWN1 585 aa7.09□□□□□ -1.27
ATXN3-245ENST00000556958 FTOQ9C0B1 505 aaKnown RBP eCLIP7.09□□□□□ -1.27
ATXN3-245ENST00000556958 WNT8AQ9H1J5 351 aa7.09□□□□□ -1.27
ATXN3-245ENST00000556958 NPDC1Q9NQX5 325 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-245ENST00000556958 NCOR2Q9Y618 2525 aa7.09□□□□□ -1.27
ATXN3-245ENST00000556958 LRRC37A2A6NM11 1700 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 FAM181BA6NEQ2 426 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 KDM4AO75164 1064 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 BAIAP3O94812 1187 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 ARHGEF15O94989 841 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 BAG3O95817 575 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 HLA-DOAP06340 250 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 ERVK-21P61565 698 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 ZXDAP98168 799 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 MECOMQ03112 1051 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 ITGA7Q13683 1181 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 SMAD2Q15796 467 aaKnown RBP7.08□□□□□ -1.28
ATXN3-245ENST00000556958 ZNF792Q3KQV3 632 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 TIGD5Q53EQ6 642 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 RETREG2Q8NC44 543 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 LENG1Q96BZ8 264 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-245ENST00000556958 MRPL38Q96DV4 380 aaKnown RBP7.08□□□□□ -1.28
ATXN3-245ENST00000556958 AGBL1Q96MI9 1066 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 CRBNQ96SW2 442 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 RAD9AQ99638 391 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 UPF3AQ9H1J1 476 aaKnown RBP7.08□□□□□ -1.28
ATXN3-245ENST00000556958 CABP5Q9NP86 173 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 CEP126Q9P2H0 1117 aa7.08□□□□□ -1.28
ATXN3-245ENST00000556958 ZHX1Q9UKY1 873 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-245ENST00000556958 RLFQ13129 1914 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 TNKSO95271 1327 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 PLXNB2O15031 1838 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 MYADML2A6NDP7 307 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 EYA2O00167 538 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 STXBP3O00186 592 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 PGK2P07205 417 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 SNRPBP14678 240 aaKnown RBP7.07□□□□□ -1.28
ATXN3-245ENST00000556958 COPB2P35606 906 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 SIGLEC14Q08ET2 396 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 ACVR2BQ13705 512 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 ACAP1Q15027 740 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 RAB3GAP1Q15042 981 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 ATP2B3Q16720 1220 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 ST3GAL2Q16842 350 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 RABL6Q3YEC7 729 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-245ENST00000556958 RMDN1Q96DB5 314 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 SUCLG2Q96I99 432 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 TANGO6Q9C0B7 1094 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms