RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 PKN1Q16512 942 aa11.21□□□□□ -0.61
TMEM260-213ENST00000556929 TKFCQ3LXA3 575 aa11.21□□□□□ -0.61
TMEM260-213ENST00000556929 USH1GQ495M9 461 aa11.21□□□□□ -0.61
TMEM260-213ENST00000556929 LARP1BQ659C4 914 aaKnown RBP11.21□□□□□ -0.61
TMEM260-213ENST00000556929 SNRNP48Q6IEG0 339 aaKnown RBP11.21□□□□□ -0.61
TMEM260-213ENST00000556929 PPP1R18Q6NYC8 613 aa11.21□□□□□ -0.61
TMEM260-213ENST00000556929 HEATR3Q7Z4Q2 680 aa11.21□□□□□ -0.61
TMEM260-213ENST00000556929 FAM177A1Q8N128 213 aaPredicted RBP11.21□□□□□ -0.61
TMEM260-213ENST00000556929 REPS2Q8NFH8 660 aa11.21□□□□□ -0.61
TMEM260-213ENST00000556929 COA7Q96BR5 231 aa11.21□□□□□ -0.61
TMEM260-213ENST00000556929 TEX13BQ9BXU2 312 aa11.21□□□□□ -0.61
TMEM260-213ENST00000556929 BARHL2Q9NY43 387 aa11.21□□□□□ -0.61
TMEM260-213ENST00000556929 BTBD7Q9P203 1132 aa11.21□□□□□ -0.61
TMEM260-213ENST00000556929 ZNF214Q9UL59 606 aaPredicted RBP11.21□□□□□ -0.61
TMEM260-213ENST00000556929 CCPG1Q9ULG6 757 aa11.21□□□□□ -0.61
TMEM260-213ENST00000556929 MRPL11Q9Y3B7 192 aaKnown RBP11.21□□□□□ -0.61
TMEM260-213ENST00000556929 PCDHA1Q9Y5I3 950 aa11.21□□□□□ -0.61
TMEM260-213ENST00000556929 SMCHD1A6NHR9 2005 aa11.21□□□□□ -0.62
TMEM260-213ENST00000556929 MGAMO43451 1857 aa11.21□□□□□ -0.62
TMEM260-213ENST00000556929 ZNFX1Q9P2E3 1918 aaKnown RBP11.2□□□□□ -0.62
TMEM260-213ENST00000556929 H3BQV1 296 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 TLR2O60603 784 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 DTNBO60941 627 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 SLC25A27O95847 323 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 ALAS1P13196 640 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 ERVK-9P63128 1117 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 ERVK-24P63145 666 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 MAP2K1Q02750 393 aaPredicted RBP11.2□□□□□ -0.62
TMEM260-213ENST00000556929 FAM110CQ1W6H9 321 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 IFFO2Q5TF58 517 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 WWC2Q6AWC2 1192 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 RIOX2Q8IUF8 465 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 CCAR1Q8IX12 1150 aaKnown RBP11.2□□□□□ -0.62
TMEM260-213ENST00000556929 ANKRD13CQ8N6S4 541 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 RGS22Q8NE09 1264 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 GPRC5AQ8NFJ5 357 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 GPKOWQ92917 476 aaPredicted RBP eCLIP11.2□□□□□ -0.62
TMEM260-213ENST00000556929 C8orf76Q96K31 380 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 AGBL1Q96MI9 1066 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 DCBLD2Q96PD2 775 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 SPATC1LQ9H0A9 340 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 GLT8D2Q9H1C3 349 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 C6orf50Q9HD87 102 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 RBPJLQ9UBG7 517 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 MORF4L1Q9UBU8 362 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 PLXNB2O15031 1838 aa11.2□□□□□ -0.62
TMEM260-213ENST00000556929 STXBP3O00186 592 aa11.19□□□□□ -0.62
TMEM260-213ENST00000556929 PPP1R11O60927 126 aaPredicted RBP11.19□□□□□ -0.62
TMEM260-213ENST00000556929 CNMDO75829 334 aa11.19□□□□□ -0.62
TMEM260-213ENST00000556929 CALML3P27482 149 aa11.19□□□□□ -0.62
TMEM260-213ENST00000556929 GNA11P29992 359 aa11.19□□□□□ -0.62
TMEM260-213ENST00000556929 NLRP5P59047 1200 aa11.19□□□□□ -0.62
TMEM260-213ENST00000556929 CRHR2Q13324 411 aa11.19□□□□□ -0.62
TMEM260-213ENST00000556929 SAFBQ15424 915 aaKnown RBP eCLIP11.19□□□□□ -0.62
TMEM260-213ENST00000556929 GALNT17Q6IS24 598 aa11.19□□□□□ -0.62
TMEM260-213ENST00000556929 NCAPG2Q86XI2 1143 aa11.19□□□□□ -0.62
TMEM260-213ENST00000556929 MCF2L2Q86YR7 1114 aa11.19□□□□□ -0.62
TMEM260-213ENST00000556929 CHST13Q8NET6 341 aa11.19□□□□□ -0.62
TMEM260-213ENST00000556929 TRERF1Q96PN7 1200 aa11.19□□□□□ -0.62
TMEM260-213ENST00000556929 BEGAINQ9BUH8 593 aa11.19□□□□□ -0.62
TMEM260-213ENST00000556929 CFHR5Q9BXR6 569 aa11.19□□□□□ -0.62
TMEM260-213ENST00000556929 MAF1Q9H063 256 aa11.19□□□□□ -0.62
TMEM260-213ENST00000556929 MROH8Q9H579 483 aa11.19□□□□□ -0.62
TMEM260-213ENST00000556929 BRMS1Q9HCU9 246 aa11.19□□□□□ -0.62
TMEM260-213ENST00000556929 VPS54Q9P1Q0 977 aa11.19□□□□□ -0.62
TMEM260-213ENST00000556929 FBXO40Q9UH90 709 aa11.19□□□□□ -0.62
TMEM260-213ENST00000556929 ADGRA2Q96PE1 1338 aa11.18□□□□□ -0.62
TMEM260-213ENST00000556929 ESYT2A0FGR8 921 aa11.18□□□□□ -0.62
TMEM260-213ENST00000556929 SMCO2A6NFE2 343 aa11.18□□□□□ -0.62
TMEM260-213ENST00000556929 BCRP11274 1271 aa11.18□□□□□ -0.62
TMEM260-213ENST00000556929 MRPL12P52815 198 aaKnown RBP11.18□□□□□ -0.62
TMEM260-213ENST00000556929 Q3C1V9 767 aa11.18□□□□□ -0.62
TMEM260-213ENST00000556929 C17orf99Q6UX52 265 aa11.18□□□□□ -0.62
TMEM260-213ENST00000556929 TEX2Q8IWB9 1127 aa11.18□□□□□ -0.62
TMEM260-213ENST00000556929 SAMD3Q8N6K7 520 aa11.18□□□□□ -0.62
TMEM260-213ENST00000556929 SHCBP1Q8NEM2 672 aa11.18□□□□□ -0.62
TMEM260-213ENST00000556929 BICD2Q8TD16 824 aa11.18□□□□□ -0.62
TMEM260-213ENST00000556929 CUL5Q93034 780 aa11.18□□□□□ -0.62
TMEM260-213ENST00000556929 AIFM3Q96NN9 605 aa11.18□□□□□ -0.62
TMEM260-213ENST00000556929 MOV10L1Q9BXT6 1211 aaKnown RBP11.18□□□□□ -0.62
TMEM260-213ENST00000556929 ACAD9Q9H845 621 aa11.18□□□□□ -0.62
TMEM260-213ENST00000556929 TXNRD2Q9NNW7 524 aa11.18□□□□□ -0.62
TMEM260-213ENST00000556929 RNF146Q9NTX7 359 aa11.18□□□□□ -0.62
TMEM260-213ENST00000556929 RNF186Q9NXI6 227 aa11.18□□□□□ -0.62
TMEM260-213ENST00000556929 SAGE1Q9NXZ1 904 aa11.18□□□□□ -0.62
TMEM260-213ENST00000556929 MAP3K20Q9NYL2 800 aaKnown RBP11.18□□□□□ -0.62
TMEM260-213ENST00000556929 CPA4Q9UI42 421 aa11.18□□□□□ -0.62
TMEM260-213ENST00000556929 PLXNA1Q9UIW2 1896 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 TRPA1O75762 1119 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 MMP1P03956 469 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 ERCC3P19447 782 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 SYT1P21579 422 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 ADCY7P51828 1080 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 FOSBP53539 338 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 GNL2Q13823 731 aaKnown RBP11.17□□□□□ -0.62
TMEM260-213ENST00000556929 KRT40Q6A162 431 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 MCTP2Q6DN12 878 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 POTEEQ6S8J3 1075 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 FBXO18Q8NFZ0 1043 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 PHF20Q9BVI0 1012 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms