RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 CABYRO75952 493 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 TTLL1O95922 423 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 MYOGP15173 224 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 SMPD1P17405 629 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 PSMC6P62333 389 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 MKRN4PQ13434 485 aaPredicted RBP10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 SLFN13Q68D06 897 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 GIMAP6Q6P9H5 292 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 ZNF444Q8N0Y2 327 aaPredicted RBP10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 MICALL1Q8N3F8 863 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 GMCL1P1Q8NEA9 526 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 OSBP2Q969R2 916 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 CHMP4CQ96CF2 233 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 AGBL1Q96MI9 1066 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 NOC4LQ9BVI4 516 aaKnown RBP10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 TRPV6Q9H1D0 765 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 WNT8AQ9H1J5 351 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 ACAD9Q9H845 621 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 EPB41L4AQ9HCS5 686 aaPredicted RBP10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 A1CFQ9NQ94 594 aaKnown RBP10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 RNF146Q9NTX7 359 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 ISY1Q9ULR0 285 aaKnown RBP10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 DDX19BQ9UMR2 479 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 MYH4Q9Y623 1939 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 PRRC2BQ5JSZ5 2229 aaKnown RBP10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 TCF20Q9UGU0 1960 aaKnown RBP10.76□□□□□ -0.69
HNRNPC-227ENST00000556897 TMEM232C9JQI7 657 aa10.76□□□□□ -0.69
HNRNPC-227ENST00000556897 DYNC1LI2O43237 492 aaPredicted RBP10.76□□□□□ -0.69
HNRNPC-227ENST00000556897 SMARCA5O60264 1052 aaPredicted RBP10.76□□□□□ -0.69
HNRNPC-227ENST00000556897 APPP05067 770 aa10.76□□□□□ -0.69
HNRNPC-227ENST00000556897 MS4A1P11836 297 aa10.76□□□□□ -0.69
HNRNPC-227ENST00000556897 BMP3P12645 472 aa10.76□□□□□ -0.69
HNRNPC-227ENST00000556897 TDO2P48775 406 aa10.76□□□□□ -0.69
HNRNPC-227ENST00000556897 TFF2Q03403 129 aa10.76□□□□□ -0.69
HNRNPC-227ENST00000556897 PPP2R2DQ66LE6 453 aa10.76□□□□□ -0.69
HNRNPC-227ENST00000556897 EEPD1Q7L9B9 569 aa10.76□□□□□ -0.69
HNRNPC-227ENST00000556897 LRRCC1Q9C099 1032 aa10.76□□□□□ -0.69
HNRNPC-227ENST00000556897 AP5M1Q9H0R1 490 aa10.76□□□□□ -0.69
HNRNPC-227ENST00000556897 ZNF287Q9HBT7 754 aa10.76□□□□□ -0.69
HNRNPC-227ENST00000556897 PDGFCQ9NRA1 345 aa10.76□□□□□ -0.69
HNRNPC-227ENST00000556897 SYNPO2Q9UMS6 1093 aa10.76□□□□□ -0.69
HNRNPC-227ENST00000556897 SLC4A7Q9Y6M7 1214 aa10.76□□□□□ -0.69
HNRNPC-227ENST00000556897 ZNF536O15090 1300 aa10.76□□□□□ -0.69
HNRNPC-227ENST00000556897 ASB14A6NK59 587 aa10.75□□□□□ -0.69
HNRNPC-227ENST00000556897 ZBBXA8MT70 800 aa10.75□□□□□ -0.69
HNRNPC-227ENST00000556897 GPAA1O43292 621 aa10.75□□□□□ -0.69
HNRNPC-227ENST00000556897 TSPY3P0CV98 308 aa10.75□□□□□ -0.69
HNRNPC-227ENST00000556897 TSPY8P0CW00 308 aa10.75□□□□□ -0.69
HNRNPC-227ENST00000556897 BMP1P13497 986 aa10.75□□□□□ -0.69
HNRNPC-227ENST00000556897 STAT2P52630 851 aa10.75□□□□□ -0.69
HNRNPC-227ENST00000556897 IKQ13123 557 aaPredicted RBP10.75□□□□□ -0.69
HNRNPC-227ENST00000556897 TMEM63BQ5T3F8 832 aa10.75□□□□□ -0.69
HNRNPC-227ENST00000556897 FBXO16Q8IX29 292 aaPredicted RBP10.75□□□□□ -0.69
HNRNPC-227ENST00000556897 KBTBD3Q8NAB2 608 aa10.75□□□□□ -0.69
HNRNPC-227ENST00000556897 APPBP2Q92624 585 aa10.75□□□□□ -0.69
HNRNPC-227ENST00000556897 VWCEQ96DN2 955 aa10.75□□□□□ -0.69
HNRNPC-227ENST00000556897 SCLYQ96I15 445 aa10.75□□□□□ -0.69
HNRNPC-227ENST00000556897 TRERF1Q96PN7 1200 aa10.75□□□□□ -0.69
HNRNPC-227ENST00000556897 TSPYL2Q9H2G4 693 aaPredicted RBP10.75□□□□□ -0.69
HNRNPC-227ENST00000556897 ECHDC1Q9NTX5 307 aa10.75□□□□□ -0.69
HNRNPC-227ENST00000556897 PCDHA11Q9Y5I1 949 aa10.75□□□□□ -0.69
HNRNPC-227ENST00000556897 M0R2C6 588 aa10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 RNF113AO15541 343 aaKnown RBP10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 ZEB2O60315 1214 aa10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 FDX1P10109 184 aa10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 ALAS1P13196 640 aa10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 ATP2A2P16615 1042 aaKnown RBP10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 MCCP23508 829 aa10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 PLA2G5P39877 138 aa10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 SLC1A4P43007 532 aa10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 KCNQ1P51787 676 aa10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 SNAP25P60880 206 aa10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 SKIV2LQ15477 1246 aaKnown RBP10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 TSHZ3Q63HK5 1081 aa10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 TAPT1Q6NXT6 567 aa10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 RPUSD2Q8IZ73 545 aaKnown RBP10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 NEDD1Q8NHV4 660 aa10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 CHURC1Q8WUH1 139 aa10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 PURBQ96QR8 312 aaKnown RBP10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 SEZ6LQ9BYH1 1024 aa10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 ALDH8A1Q9H2A2 487 aaPredicted RBP10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 TRMT13Q9NUP7 481 aaKnown RBP10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 REV3LO60673 3130 aa10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 PLIN4Q96Q06 1357 aa10.74□□□□□ -0.69
HNRNPC-227ENST00000556897 RFXAPO00287 272 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 CA3P07451 260 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 CYP2C9P11712 490 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 GNAT2P19087 354 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 TFAP4Q01664 338 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 TTLL4Q14679 1199 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 TKFCQ3LXA3 575 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 MUM1L1Q5H9M0 696 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 IQSEC1Q6DN90 963 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 KIAA1211Q6ZU35 1233 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 KCTD1Q719H9 257 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 DEFB128Q7Z7B8 93 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 FAM160B2Q86V87 743 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 IFNL3Q8IZI9 196 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 STAG1Q8WVM7 1258 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 FAM122AQ96E09 287 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms