RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 OAZ1P54368 228 aa17.52■□□□□ 0.4
CHD8-211ENST00000556833 RRP12Q5JTH9 1297 aaKnown RBP17.52■□□□□ 0.4
CHD8-211ENST00000556833 NSMFQ6X4W1 530 aa17.52■□□□□ 0.4
CHD8-211ENST00000556833 C16orf59Q7L2K0 433 aa17.52■□□□□ 0.4
CHD8-211ENST00000556833 TLK2Q86UE8 772 aa17.52■□□□□ 0.4
CHD8-211ENST00000556833 FAM160B2Q86V87 743 aa17.52■□□□□ 0.4
CHD8-211ENST00000556833 USP38Q8NB14 1042 aa17.52■□□□□ 0.4
CHD8-211ENST00000556833 CHURC1Q8WUH1 139 aa17.52■□□□□ 0.4
CHD8-211ENST00000556833 IL17RBQ9NRM6 502 aa17.52■□□□□ 0.4
CHD8-211ENST00000556833 ELP1O95163 1332 aa17.51■□□□□ 0.39
CHD8-211ENST00000556833 UMODL1Q5DID0 1318 aa17.51■□□□□ 0.39
CHD8-211ENST00000556833 MROH7Q68CQ1 1323 aa17.51■□□□□ 0.39
CHD8-211ENST00000556833 FRMPD2Q68DX3 1309 aaPredicted RBP17.51■□□□□ 0.39
CHD8-211ENST00000556833 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.51■□□□□ 0.39
CHD8-211ENST00000556833 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.51■□□□□ 0.39
CHD8-211ENST00000556833 CDK7P50613 346 aa17.51■□□□□ 0.39
CHD8-211ENST00000556833 PSMC6P62333 389 aa17.51■□□□□ 0.39
CHD8-211ENST00000556833 PPIGQ13427 754 aaKnown RBP eCLIP17.51■□□□□ 0.39
CHD8-211ENST00000556833 TMEM240Q5SV17 173 aa17.51■□□□□ 0.39
CHD8-211ENST00000556833 TTBK2Q6IQ55 1244 aa17.51■□□□□ 0.39
CHD8-211ENST00000556833 MFSD5Q6N075 450 aa17.51■□□□□ 0.39
CHD8-211ENST00000556833 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.51■□□□□ 0.39
CHD8-211ENST00000556833 FAM126BQ8IXS8 530 aa17.51■□□□□ 0.39
CHD8-211ENST00000556833 TIFAQ96CG3 184 aa17.51■□□□□ 0.39
CHD8-211ENST00000556833 GMCL1Q96IK5 515 aa17.51■□□□□ 0.39
CHD8-211ENST00000556833 CCPG1Q9ULG6 757 aa17.51■□□□□ 0.39
CHD8-211ENST00000556833 PRR12Q9ULL5 1215 aa17.51■□□□□ 0.39
CHD8-211ENST00000556833 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.51■□□□□ 0.39
CHD8-211ENST00000556833 SPTBN5Q9NRC6 3674 aaKnown RBP17.51■□□□□ 0.39
CHD8-211ENST00000556833 TLR3O15455 904 aaKnown RBP17.5■□□□□ 0.39
CHD8-211ENST00000556833 DYNC1LI2O43237 492 aaPredicted RBP17.5■□□□□ 0.39
CHD8-211ENST00000556833 SMPD1P17405 629 aa17.5■□□□□ 0.39
CHD8-211ENST00000556833 ZNF365Q70YC5 407 aa17.5■□□□□ 0.39
CHD8-211ENST00000556833 PPP1R13LQ8WUF5 828 aa17.5■□□□□ 0.39
CHD8-211ENST00000556833 ZNF576Q9H609 170 aa17.5■□□□□ 0.39
CHD8-211ENST00000556833 PRDM6Q9NQX0 595 aa17.5■□□□□ 0.39
CHD8-211ENST00000556833 CCL23P55773 120 aa17.49■□□□□ 0.39
CHD8-211ENST00000556833 FSCN1Q16658 493 aaKnown RBP17.49■□□□□ 0.39
CHD8-211ENST00000556833 ANKRD45Q5TZF3 282 aa17.49■□□□□ 0.39
CHD8-211ENST00000556833 RCSD1Q6JBY9 416 aa17.49■□□□□ 0.39
CHD8-211ENST00000556833 TMEM199Q8N511 208 aa17.49■□□□□ 0.39
CHD8-211ENST00000556833 AP5M1Q9H0R1 490 aa17.49■□□□□ 0.39
CHD8-211ENST00000556833 GPCPD1Q9NPB8 672 aa17.49■□□□□ 0.39
CHD8-211ENST00000556833 CYP39A1Q9NYL5 469 aa17.49■□□□□ 0.39
CHD8-211ENST00000556833 SYNPO2Q9UMS6 1093 aa17.49■□□□□ 0.39
CHD8-211ENST00000556833 ASB14A6NK59 587 aa17.48■□□□□ 0.39
CHD8-211ENST00000556833 HAND2P61296 217 aa17.48■□□□□ 0.39
CHD8-211ENST00000556833 FAM227BQ96M60 508 aa17.48■□□□□ 0.39
CHD8-211ENST00000556833 PBX4Q9BYU1 374 aa17.48■□□□□ 0.39
CHD8-211ENST00000556833 TRPV6Q9H1D0 765 aa17.48■□□□□ 0.39
CHD8-211ENST00000556833 PRDM12Q9H4Q4 367 aa17.48■□□□□ 0.39
CHD8-211ENST00000556833 CXXC1Q9P0U4 656 aaPredicted RBP17.48■□□□□ 0.39
CHD8-211ENST00000556833 ZBTB47Q9UFB7 747 aaPredicted RBP17.48■□□□□ 0.39
CHD8-211ENST00000556833 GNEQ9Y223 722 aaKnown RBP17.48■□□□□ 0.39
CHD8-211ENST00000556833 SCN5AQ14524 2016 aa17.48■□□□□ 0.39
CHD8-211ENST00000556833 CHD9Q3L8U1 2897 aa17.48■□□□□ 0.39
CHD8-211ENST00000556833 FDX1P10109 184 aa17.47■□□□□ 0.39
CHD8-211ENST00000556833 ITGA7Q13683 1181 aa17.47■□□□□ 0.39
CHD8-211ENST00000556833 TKFCQ3LXA3 575 aa17.47■□□□□ 0.39
CHD8-211ENST00000556833 KIAA1211Q6ZU35 1233 aa17.47■□□□□ 0.39
CHD8-211ENST00000556833 OTOP2Q7RTS6 562 aa17.47■□□□□ 0.39
CHD8-211ENST00000556833 CRBNQ96SW2 442 aa17.47■□□□□ 0.39
CHD8-211ENST00000556833 HIPK3Q9H422 1215 aa17.47■□□□□ 0.39
CHD8-211ENST00000556833 TTC28Q96AY4 2481 aa17.47■□□□□ 0.39
CHD8-211ENST00000556833 GRIN2DO15399 1336 aa17.47■□□□□ 0.39
CHD8-211ENST00000556833 SALL3Q9BXA9 1300 aa17.47■□□□□ 0.39
CHD8-211ENST00000556833 TMEM265A0A087WTH1 108 aa17.46■□□□□ 0.39
CHD8-211ENST00000556833 A0A0D9SFI3 127 aa17.46■□□□□ 0.39
CHD8-211ENST00000556833 PTPDC1A2A3K4 754 aa17.46■□□□□ 0.39
CHD8-211ENST00000556833 NFIBO00712 420 aa17.46■□□□□ 0.39
CHD8-211ENST00000556833 CD4P01730 458 aa17.46■□□□□ 0.39
CHD8-211ENST00000556833 BAATQ14032 418 aaPredicted RBP17.46■□□□□ 0.39
CHD8-211ENST00000556833 TAPT1Q6NXT6 567 aa17.46■□□□□ 0.39
CHD8-211ENST00000556833 NKX2-4Q9H2Z4 354 aa17.46■□□□□ 0.39
CHD8-211ENST00000556833 B4GALT4O60513 344 aa17.45■□□□□ 0.38
CHD8-211ENST00000556833 CALML3P27482 149 aa17.45■□□□□ 0.38
CHD8-211ENST00000556833 CCDC85BQ15834 202 aaPredicted RBP17.45■□□□□ 0.38
CHD8-211ENST00000556833 SYDE2Q5VT97 1194 aa17.45■□□□□ 0.38
CHD8-211ENST00000556833 PSRC1Q6PGN9 363 aaPredicted RBP17.45■□□□□ 0.38
CHD8-211ENST00000556833 SLC30A10Q6XR72 485 aa17.45■□□□□ 0.38
CHD8-211ENST00000556833 SCLYQ96I15 445 aa17.45■□□□□ 0.38
CHD8-211ENST00000556833 IL23AQ9NPF7 189 aa17.45■□□□□ 0.38
CHD8-211ENST00000556833 ICAM1P05362 532 aa17.44■□□□□ 0.38
CHD8-211ENST00000556833 MYL3P08590 195 aa17.44■□□□□ 0.38
CHD8-211ENST00000556833 RABGGTBP53611 331 aa17.44■□□□□ 0.38
CHD8-211ENST00000556833 RRP1P56182 461 aaKnown RBP17.44■□□□□ 0.38
CHD8-211ENST00000556833 ZNF589Q86UQ0 364 aaPredicted RBP17.44■□□□□ 0.38
CHD8-211ENST00000556833 DCAF4Q8WV16 495 aa17.44■□□□□ 0.38
CHD8-211ENST00000556833 EVI5LQ96CN4 794 aa17.44■□□□□ 0.38
CHD8-211ENST00000556833 GAS2L1Q99501 681 aaPredicted RBP17.44■□□□□ 0.38
CHD8-211ENST00000556833 TMEM47Q9BQJ4 181 aa17.44■□□□□ 0.38
CHD8-211ENST00000556833 RANBP17Q9H2T7 1088 aaKnown RBP17.44■□□□□ 0.38
CHD8-211ENST00000556833 ZBBXA8MT70 800 aa17.43■□□□□ 0.38
CHD8-211ENST00000556833 RBAK-RBAKDNI3L0D1 243 aa17.43■□□□□ 0.38
CHD8-211ENST00000556833 ZEB2O60315 1214 aa17.43■□□□□ 0.38
CHD8-211ENST00000556833 PLA2G6O60733 806 aa17.43■□□□□ 0.38
CHD8-211ENST00000556833 IGFBP4P22692 258 aa17.43■□□□□ 0.38
CHD8-211ENST00000556833 ALDH5A1P51649 535 aaPredicted RBP17.43■□□□□ 0.38
CHD8-211ENST00000556833 CHMP4BP1P59074 171 aa17.43■□□□□ 0.38
CHD8-211ENST00000556833 NMIQ13287 307 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms