RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 NRBP1Q9UHY1 535 aa12.51□□□□□ -0.41
GABRB3-211ENST00000556636 SNX14Q9Y5W7 946 aa12.51□□□□□ -0.41
GABRB3-211ENST00000556636 ZNFX1Q9P2E3 1918 aaKnown RBP12.5□□□□□ -0.41
GABRB3-211ENST00000556636 POTEB2H3BUK9 544 aa12.5□□□□□ -0.41
GABRB3-211ENST00000556636 SEPT4O43236 478 aa12.5□□□□□ -0.41
GABRB3-211ENST00000556636 PPP1R11O60927 126 aaPredicted RBP12.5□□□□□ -0.41
GABRB3-211ENST00000556636 BAATQ14032 418 aaPredicted RBP12.5□□□□□ -0.41
GABRB3-211ENST00000556636 CDC37Q16543 378 aaPredicted RBP12.5□□□□□ -0.41
GABRB3-211ENST00000556636 QRICH1Q2TAL8 776 aa12.5□□□□□ -0.41
GABRB3-211ENST00000556636 DHX32Q7L7V1 743 aaKnown RBP12.5□□□□□ -0.41
GABRB3-211ENST00000556636 SGMS1Q86VZ5 419 aa12.5□□□□□ -0.41
GABRB3-211ENST00000556636 ZNF654Q8IZM8 581 aa12.5□□□□□ -0.41
GABRB3-211ENST00000556636 DIS3LQ8TF46 1054 aaKnown RBP12.5□□□□□ -0.41
GABRB3-211ENST00000556636 TBC1D5Q92609 795 aa12.5□□□□□ -0.41
GABRB3-211ENST00000556636 PAWRQ96IZ0 340 aaKnown RBP12.5□□□□□ -0.41
GABRB3-211ENST00000556636 MAP3K14Q99558 947 aa12.5□□□□□ -0.41
GABRB3-211ENST00000556636 MYL10Q9BUA6 226 aa12.5□□□□□ -0.41
GABRB3-211ENST00000556636 KATNBL1Q9H079 304 aa12.5□□□□□ -0.41
GABRB3-211ENST00000556636 PNMA2Q9UL42 364 aa12.5□□□□□ -0.41
GABRB3-211ENST00000556636 SYNGAP1Q96PV0 1343 aa12.49□□□□□ -0.41
GABRB3-211ENST00000556636 EPB41L2O43491 1005 aaKnown RBP12.49□□□□□ -0.41
GABRB3-211ENST00000556636 FARP2O94887 1054 aaPredicted RBP12.49□□□□□ -0.41
GABRB3-211ENST00000556636 REC8O95072 547 aa12.49□□□□□ -0.41
GABRB3-211ENST00000556636 CNGA1P29973 690 aa12.49□□□□□ -0.41
GABRB3-211ENST00000556636 ANO1Q5XXA6 986 aa12.49□□□□□ -0.41
GABRB3-211ENST00000556636 NSMFQ6X4W1 530 aa12.49□□□□□ -0.41
GABRB3-211ENST00000556636 CATIPQ7Z7H3 387 aa12.49□□□□□ -0.41
GABRB3-211ENST00000556636 ANKLE1Q8NAG6 615 aa12.49□□□□□ -0.41
GABRB3-211ENST00000556636 RGS22Q8NE09 1264 aa12.49□□□□□ -0.41
GABRB3-211ENST00000556636 TCEANC2Q96MN5 208 aa12.49□□□□□ -0.41
GABRB3-211ENST00000556636 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.49□□□□□ -0.41
GABRB3-211ENST00000556636 DDX49Q9Y6V7 483 aaKnown RBP12.49□□□□□ -0.41
GABRB3-211ENST00000556636 PFASO15067 1338 aa12.48□□□□□ -0.41
GABRB3-211ENST00000556636 OPLAHO14841 1288 aa12.48□□□□□ -0.41
GABRB3-211ENST00000556636 MSCO60682 206 aa12.48□□□□□ -0.41
GABRB3-211ENST00000556636 DDAH1O94760 285 aa12.48□□□□□ -0.41
GABRB3-211ENST00000556636 COL6A1P12109 1028 aa12.48□□□□□ -0.41
GABRB3-211ENST00000556636 CPA1P15085 419 aa12.48□□□□□ -0.41
GABRB3-211ENST00000556636 RPS6P62753 249 aaKnown RBP12.48□□□□□ -0.41
GABRB3-211ENST00000556636 KRT32Q14532 448 aa12.48□□□□□ -0.41
GABRB3-211ENST00000556636 USH1GQ495M9 461 aa12.48□□□□□ -0.41
GABRB3-211ENST00000556636 ARMCX2Q7L311 632 aa12.48□□□□□ -0.41
GABRB3-211ENST00000556636 FBXO11Q86XK2 927 aa12.48□□□□□ -0.41
GABRB3-211ENST00000556636 CCDC144CPQ8IYA2 1237 aa12.48□□□□□ -0.41
GABRB3-211ENST00000556636 MORC4Q8TE76 937 aa12.48□□□□□ -0.41
GABRB3-211ENST00000556636 NUP133Q8WUM0 1156 aa12.48□□□□□ -0.41
GABRB3-211ENST00000556636 PIGSQ96S52 555 aa12.48□□□□□ -0.41
GABRB3-211ENST00000556636 BRPF3Q9ULD4 1205 aa12.48□□□□□ -0.41
GABRB3-211ENST00000556636 ZBTB5O15062 677 aa12.47□□□□□ -0.41
GABRB3-211ENST00000556636 RXRAP19793 462 aa12.47□□□□□ -0.41
GABRB3-211ENST00000556636 SMARCA1P28370 1054 aa12.47□□□□□ -0.41
GABRB3-211ENST00000556636 ACVR2BQ13705 512 aa12.47□□□□□ -0.41
GABRB3-211ENST00000556636 SLC30A10Q6XR72 485 aa12.47□□□□□ -0.41
GABRB3-211ENST00000556636 RNF207Q6ZRF8 634 aa12.47□□□□□ -0.41
GABRB3-211ENST00000556636 SRBD1Q8N5C6 995 aaKnown RBP12.47□□□□□ -0.41
GABRB3-211ENST00000556636 ABHD16BQ9H3Z7 469 aa12.47□□□□□ -0.41
GABRB3-211ENST00000556636 PDE4DIPQ5VU43 2346 aa12.46□□□□□ -0.41
GABRB3-211ENST00000556636 ABCB11O95342 1321 aa12.46□□□□□ -0.41
GABRB3-211ENST00000556636 PTPDC1A2A3K4 754 aa12.46□□□□□ -0.41
GABRB3-211ENST00000556636 CCDC69A6NI79 296 aa12.46□□□□□ -0.41
GABRB3-211ENST00000556636 ADCY6O43306 1168 aa12.46□□□□□ -0.41
GABRB3-211ENST00000556636 DHX16O60231 1041 aaKnown RBP12.46□□□□□ -0.41
GABRB3-211ENST00000556636 PLEKHA8P1O95397 391 aa12.46□□□□□ -0.41
GABRB3-211ENST00000556636 HMGB1P09429 215 aaKnown RBP12.46□□□□□ -0.41
GABRB3-211ENST00000556636 GHRHRQ02643 423 aa12.46□□□□□ -0.41
GABRB3-211ENST00000556636 NFXL1Q6ZNB6 911 aa12.46□□□□□ -0.41
GABRB3-211ENST00000556636 NECAB2Q7Z6G3 386 aa12.46□□□□□ -0.41
GABRB3-211ENST00000556636 RAB11FIP4Q86YS3 637 aa12.46□□□□□ -0.41
GABRB3-211ENST00000556636 FBXL16Q8N461 479 aa12.46□□□□□ -0.41
GABRB3-211ENST00000556636 FANCBQ8NB91 859 aa12.46□□□□□ -0.41
GABRB3-211ENST00000556636 SYTL5Q8TDW5 730 aaPredicted RBP12.46□□□□□ -0.41
GABRB3-211ENST00000556636 JAKMIP1Q96N16 626 aaKnown RBP12.46□□□□□ -0.41
GABRB3-211ENST00000556636 AMNQ9BXJ7 453 aa12.46□□□□□ -0.41
GABRB3-211ENST00000556636 AGXT2Q9BYV1 514 aa12.46□□□□□ -0.41
GABRB3-211ENST00000556636 MAF1Q9H063 256 aa12.46□□□□□ -0.41
GABRB3-211ENST00000556636 FAM217BQ9NTX9 383 aaPredicted RBP12.46□□□□□ -0.41
GABRB3-211ENST00000556636 COL20A1Q9P218 1284 aa12.46□□□□□ -0.41
GABRB3-211ENST00000556636 CNPY2Q9Y2B0 182 aa12.46□□□□□ -0.41
GABRB3-211ENST00000556636 SLC12A7Q9Y666 1083 aa12.46□□□□□ -0.41
GABRB3-211ENST00000556636 PNMA6FA0A0J9YX94 578 aa12.45□□□□□ -0.42
GABRB3-211ENST00000556636 ASB14A6NK59 587 aa12.45□□□□□ -0.42
GABRB3-211ENST00000556636 EDNRBP24530 442 aa12.45□□□□□ -0.42
GABRB3-211ENST00000556636 CALML3P27482 149 aa12.45□□□□□ -0.42
GABRB3-211ENST00000556636 ALDH5A1P51649 535 aaPredicted RBP12.45□□□□□ -0.42
GABRB3-211ENST00000556636 CCDC144BQ3MJ40 725 aa12.45□□□□□ -0.42
GABRB3-211ENST00000556636 TMEM63BQ5T3F8 832 aa12.45□□□□□ -0.42
GABRB3-211ENST00000556636 TAPT1Q6NXT6 567 aa12.45□□□□□ -0.42
GABRB3-211ENST00000556636 APOA5Q6Q788 366 aa12.45□□□□□ -0.42
GABRB3-211ENST00000556636 HOMER1Q86YM7 354 aa12.45□□□□□ -0.42
GABRB3-211ENST00000556636 CMTR1Q8N1G2 835 aaKnown RBP12.45□□□□□ -0.42
GABRB3-211ENST00000556636 LENG1Q96BZ8 264 aaPredicted RBP12.45□□□□□ -0.42
GABRB3-211ENST00000556636 TAAR1Q96RJ0 339 aa12.45□□□□□ -0.42
GABRB3-211ENST00000556636 SPZ1Q9BXG8 430 aa12.45□□□□□ -0.42
GABRB3-211ENST00000556636 ZSWIM6Q9HCJ5 1215 aa12.45□□□□□ -0.42
GABRB3-211ENST00000556636 PDGFCQ9NRA1 345 aa12.45□□□□□ -0.42
GABRB3-211ENST00000556636 FAM184BQ9ULE4 1060 aa12.45□□□□□ -0.42
GABRB3-211ENST00000556636 MRPL11Q9Y3B7 192 aaKnown RBP12.45□□□□□ -0.42
GABRB3-211ENST00000556636 PCDHA1Q9Y5I3 950 aa12.45□□□□□ -0.42
GABRB3-211ENST00000556636 LOC102724159A0A0B4J2E5 919 aa12.44□□□□□ -0.42
GABRB3-211ENST00000556636 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms