RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 FERMT2Q96AC1 680 aa9.53□□□□□ -0.88
MARK3-210ENST00000556463 EPSTI1Q96J88 318 aa9.53□□□□□ -0.88
MARK3-210ENST00000556463 FAM167BQ9BTA0 163 aa9.53□□□□□ -0.88
MARK3-210ENST00000556463 PHF20Q9BVI0 1012 aa9.53□□□□□ -0.88
MARK3-210ENST00000556463 SUDS3Q9H7L9 328 aaPredicted RBP9.53□□□□□ -0.88
MARK3-210ENST00000556463 KCNJ14Q9UNX9 436 aa9.53□□□□□ -0.88
MARK3-210ENST00000556463 CDK17Q00537 523 aa9.53□□□□□ -0.88
MARK3-210ENST00000556463 CTDSPL2Q05D32 466 aa9.53□□□□□ -0.88
MARK3-210ENST00000556463 SPAG1Q07617 926 aa9.53□□□□□ -0.88
MARK3-210ENST00000556463 EARS2Q5JPH6 523 aaKnown RBP9.53□□□□□ -0.88
MARK3-210ENST00000556463 GSPT2Q8IYD1 628 aaKnown RBP9.53□□□□□ -0.88
MARK3-210ENST00000556463 C1orf131Q8NDD1 294 aaKnown RBP9.53□□□□□ -0.88
MARK3-210ENST00000556463 STAG1Q8WVM7 1258 aa9.53□□□□□ -0.88
MARK3-210ENST00000556463 SLF1Q9BQI6 1058 aa9.53□□□□□ -0.88
MARK3-210ENST00000556463 PIH1D3Q9NQM4 214 aaKnown RBP9.53□□□□□ -0.88
MARK3-210ENST00000556463 FAM184BQ9ULE4 1060 aa9.53□□□□□ -0.88
MARK3-210ENST00000556463 TPX2Q9ULW0 747 aaKnown RBP9.53□□□□□ -0.88
MARK3-210ENST00000556463 SHANK3Q9BYB0 1731 aa9.53□□□□□ -0.88
MARK3-210ENST00000556463 ZNF142P52746 1687 aaPredicted RBP9.53□□□□□ -0.88
MARK3-210ENST00000556463 WNT7AO00755 349 aa9.53□□□□□ -0.88
MARK3-210ENST00000556463 PDHBP11177 359 aa9.53□□□□□ -0.88
MARK3-210ENST00000556463 CREG2Q8IUH2 290 aa9.53□□□□□ -0.88
MARK3-210ENST00000556463 TTC26A0AVF1 554 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 RCCD1A6NED2 376 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 TTC36A6NLP5 189 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 A6NNZ2 444 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 TMCO5BA8MYB1 307 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 KIF3CO14782 793 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 TPD52L2O43399 206 aaKnown RBP9.52□□□□□ -0.89
MARK3-210ENST00000556463 FSBPO95073 299 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 CKAP4Q07065 602 aaKnown RBP9.52□□□□□ -0.89
MARK3-210ENST00000556463 KCNB1Q14721 858 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 TUBB8Q3ZCM7 444 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 TMEM67Q5HYA8 995 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 GIGYF2Q6Y7W6 1299 aaKnown RBP9.52□□□□□ -0.89
MARK3-210ENST00000556463 SYMPKQ92797 1274 aaKnown RBP9.52□□□□□ -0.89
MARK3-210ENST00000556463 CAVIN3Q969G5 261 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 MYL10Q9BUA6 226 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.52□□□□□ -0.89
MARK3-210ENST00000556463 PDS5AQ29RF7 1337 aaKnown RBP9.52□□□□□ -0.89
MARK3-210ENST00000556463 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.52□□□□□ -0.89
MARK3-210ENST00000556463 POM121CA8CG34 1229 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 PYGLP06737 847 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 POLD1P28340 1107 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 KRT9P35527 623 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 STX17P56962 302 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 MAP2K5Q13163 448 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 TTF1Q15361 905 aaPredicted RBP9.52□□□□□ -0.89
MARK3-210ENST00000556463 AMOTL1Q8IY63 956 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 SMYD4Q8IYR2 804 aaPredicted RBP9.52□□□□□ -0.89
MARK3-210ENST00000556463 OR8K1Q8NGG5 319 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 ZKSCAN4Q969J2 545 aaPredicted RBP9.52□□□□□ -0.89
MARK3-210ENST00000556463 DDX27Q96GQ7 796 aaKnown RBP9.52□□□□□ -0.89
MARK3-210ENST00000556463 CRISPLD2Q9H0B8 497 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 SLC12A7Q9Y666 1083 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 C1orf167Q5SNV9 1468 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 SOS2Q07890 1332 aaPredicted RBP9.52□□□□□ -0.89
MARK3-210ENST00000556463 GOLGA8KD6RF30 607 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 CASP1P29466 404 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 CNGA1P29973 690 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 ATP2C1P98194 919 aaPredicted RBP9.52□□□□□ -0.89
MARK3-210ENST00000556463 TRIM68Q6AZZ1 485 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 MB21D1Q8N884 522 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 RNF26Q9BY78 433 aaPredicted RBP9.52□□□□□ -0.89
MARK3-210ENST00000556463 INCENPQ9NQS7 918 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 GGA2Q9UJY4 613 aa9.52□□□□□ -0.89
MARK3-210ENST00000556463 ANKRD36CQ5JPF3 1778 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 SRRM3A6NNA2 597 aaPredicted RBP9.51□□□□□ -0.89
MARK3-210ENST00000556463 LGALS16A8MUM7 142 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 KCNJ18B7U540 433 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 HGSO14964 777 aaPredicted RBP9.51□□□□□ -0.89
MARK3-210ENST00000556463 LCA5LO95447 670 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 KCNJ12Q14500 433 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 SAFBQ15424 915 aaKnown RBP eCLIP9.51□□□□□ -0.89
MARK3-210ENST00000556463 SEC23AQ15436 765 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 ZNF658Q5TYW1 1059 aaPredicted RBP9.51□□□□□ -0.89
MARK3-210ENST00000556463 CNNM2Q9H8M5 875 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 PCDHB8Q9UN66 801 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 PCDHB13Q9Y5F0 798 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 SRGAP2O75044 1071 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 BMP15O95972 392 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 PDE6AP16499 860 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 HNRNPH3P31942 346 aaKnown RBP9.51□□□□□ -0.89
MARK3-210ENST00000556463 MYO1EQ12965 1108 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 PDCLQ13371 301 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 TTMPQ5BVD1 217 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 CYB5RLQ6IPT4 315 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 TRIM74Q86UV6 250 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 TRIM73Q86UV7 250 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 TTC5Q8N0Z6 440 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 EHBP1Q8NDI1 1231 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 CAPS2Q9BXY5 557 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 LACRTQ9GZZ8 138 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 KLC4Q9NSK0 619 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 CTNND2Q9UQB3 1225 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 ZNF532Q9HCE3 1301 aa9.51□□□□□ -0.89
MARK3-210ENST00000556463 H7C1D1 291 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 ENC1O14682 589 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 C21orf2O43822 256 aa9.5□□□□□ -0.89
MARK3-210ENST00000556463 CSB-PGBD3P0DP91 1061 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms