RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 MCM9Q9NXL9 1143 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 VPS54Q9P1Q0 977 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 FBXO2Q9UK22 296 aaPredicted RBP5.72□□□□□ -1.49
TMEM260-210ENST00000556422 IKBKGQ9Y6K9 419 aa5.72□□□□□ -1.49
TMEM260-210ENST00000556422 GOLGA6L19H0YKK7 550 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 PRPF3O43395 683 aaKnown RBP5.71□□□□□ -1.5
TMEM260-210ENST00000556422 DDAH1O94760 285 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 LDHBP07195 334 aaKnown RBP5.71□□□□□ -1.5
TMEM260-210ENST00000556422 PPP4CP60510 307 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 SLC7A5Q01650 507 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 PDCD2Q16342 344 aaPredicted RBP5.71□□□□□ -1.5
TMEM260-210ENST00000556422 ZNF827Q17R98 1081 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 CCDC144BQ3MJ40 725 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 ARMC3Q5W041 872 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 KRT27Q7Z3Y8 459 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 TMEM110Q86TL2 294 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 METTL16Q86W50 562 aaKnown RBP5.71□□□□□ -1.5
TMEM260-210ENST00000556422 FOXP4Q8IVH2 680 aaPredicted RBP5.71□□□□□ -1.5
TMEM260-210ENST00000556422 ELOA2Q8IYF1 753 aaPredicted RBP5.71□□□□□ -1.5
TMEM260-210ENST00000556422 RPGRQ92834 1020 aaKnown RBP5.71□□□□□ -1.5
TMEM260-210ENST00000556422 DYNLL2Q96FJ2 89 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 FAM81BQ96LP2 452 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 SDF4Q9BRK5 362 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 OGFRQ9NZT2 677 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 SWAP70Q9UH65 585 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 TUBE1Q9UJT0 475 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 PYCARDQ9ULZ3 195 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 GREB1LQ9C091 1923 aaPredicted RBP5.71□□□□□ -1.5
TMEM260-210ENST00000556422 SIPA1L1O43166 1804 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 UFL1O94874 794 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 PTGS1P23219 599 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 IL4RP24394 825 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 PLCD1P51178 756 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 NCAPHQ15003 741 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 FXNQ16595 210 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 TXNRD1Q16881 649 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 SLC35G1Q2M3R5 365 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 RILPL1Q5EBL4 403 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 SPECC1Q5M775 1068 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 ZCCHC8Q6NZY4 707 aaKnown RBP5.71□□□□□ -1.5
TMEM260-210ENST00000556422 ZNF804AQ7Z570 1209 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 KIAA1524Q8TCG1 905 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 RMDN2Q96LZ7 410 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 SPTLC3Q9NUV7 552 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 ANO10Q9NW15 660 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 PRR12Q9ULL5 1215 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 FOXN1O15353 648 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 TIMM44O43615 452 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 PTPREP23469 700 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 SYKP43405 635 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 ZNF131P52739 623 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 MDM2Q00987 491 aaPredicted RBP5.71□□□□□ -1.5
TMEM260-210ENST00000556422 LRMPQ12912 555 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 GNL2Q13823 731 aaKnown RBP5.71□□□□□ -1.5
TMEM260-210ENST00000556422 C11orf91Q3C1V1 193 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 SOGA3Q5TF21 947 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 KLHL10Q6JEL2 608 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 CATIPQ7Z7H3 387 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 MYO1HQ8N1T3 1032 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 SLC44A5Q8NCS7 719 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 TBC1D16Q8TBP0 767 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 SNRNP27Q8WVK2 155 aaKnown RBP5.71□□□□□ -1.5
TMEM260-210ENST00000556422 BPIFA3Q9BQP9 254 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 TRIM5Q9C035 493 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 TSPYL2Q9H2G4 693 aaPredicted RBP5.71□□□□□ -1.5
TMEM260-210ENST00000556422 RETREG1Q9H6L5 497 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 SFMBT1Q9UHJ3 866 aa5.71□□□□□ -1.5
TMEM260-210ENST00000556422 V9GY48 417 aaPredicted RBP5.71□□□□□ -1.5
TMEM260-210ENST00000556422 CUTAO60888 179 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 SLC3A2P08195 630 aaKnown RBP5.7□□□□□ -1.5
TMEM260-210ENST00000556422 MYBL2P10244 700 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 MYCLP1P12525 358 aaPredicted RBP5.7□□□□□ -1.5
TMEM260-210ENST00000556422 ATP2B1P20020 1258 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 BMP6P22004 513 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 TPP2P29144 1249 aaPredicted RBP5.7□□□□□ -1.5
TMEM260-210ENST00000556422 ST5P78524 1137 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 PNOCQ13519 176 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 TOMM20Q15388 145 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 USP49Q70CQ1 688 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.7□□□□□ -1.5
TMEM260-210ENST00000556422 AOPEPQ8N6M6 819 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 KRI1Q8N9T8 703 aaKnown RBP5.7□□□□□ -1.5
TMEM260-210ENST00000556422 DDX12PQ92771 950 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 CABP5Q9NP86 173 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 KIAA1522Q9P206 1035 aaPredicted RBP5.7□□□□□ -1.5
TMEM260-210ENST00000556422 RGPD3A6NKT7 1758 aaPredicted RBP5.7□□□□□ -1.5
TMEM260-210ENST00000556422 RGPD4Q7Z3J3 1758 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 MYH4Q9Y623 1939 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 TSPY2A6NKD2 308 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 BIN1O00499 593 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 CDC25BP30305 580 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 ADCY2Q08462 1091 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 OLFM4Q6UX06 510 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 RASGRP2Q7LDG7 609 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 CCDC186Q7Z3E2 898 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 CEP57L1Q8IYX8 460 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 TGFBRAP1Q8WUH2 860 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 POLR3CQ9BUI4 534 aaPredicted RBP5.7□□□□□ -1.5
TMEM260-210ENST00000556422 TCEAL9Q9UHQ7 104 aa5.7□□□□□ -1.5
TMEM260-210ENST00000556422 MORC2Q9Y6X9 1032 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms