RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 FRS2Q8WU20 508 aa5.5□□□□□ -1.53
SPTLC2-204ENST00000556264 COPS5Q92905 334 aa5.5□□□□□ -1.53
SPTLC2-204ENST00000556264 MTMR8Q96EF0 704 aa5.5□□□□□ -1.53
SPTLC2-204ENST00000556264 CCDC136Q96JN2 1154 aa5.5□□□□□ -1.53
SPTLC2-204ENST00000556264 COX4I2Q96KJ9 171 aa5.5□□□□□ -1.53
SPTLC2-204ENST00000556264 TTC1Q99614 292 aa5.5□□□□□ -1.53
SPTLC2-204ENST00000556264 PHF20Q9BVI0 1012 aa5.5□□□□□ -1.53
SPTLC2-204ENST00000556264 CCDC8Q9H0W5 538 aaPredicted RBP5.5□□□□□ -1.53
SPTLC2-204ENST00000556264 SAMD15Q9P1V8 674 aa5.5□□□□□ -1.53
SPTLC2-204ENST00000556264 RNF112Q9ULX5 631 aa5.5□□□□□ -1.53
SPTLC2-204ENST00000556264 PCDHA8Q9Y5H6 950 aa5.5□□□□□ -1.53
SPTLC2-204ENST00000556264 ST14Q9Y5Y6 855 aa5.5□□□□□ -1.53
SPTLC2-204ENST00000556264 SHISA3A0PJX4 238 aa5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 ARNTLO00327 626 aa5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 NEMP1O14524 444 aa5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 AURKAO14965 403 aa5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 APBA3O96018 575 aa5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 KIR3DL1P43629 444 aa5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 NOP2P46087 812 aaKnown RBP5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 ID4P47928 161 aa5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 TMPRSS15P98073 1019 aa5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 NFE2Q16621 373 aaPredicted RBP5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 CLEC16AQ2KHT3 1053 aa5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 SKOR2Q2VWA4 1001 aaPredicted RBP5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 ABHD17CQ6PCB6 329 aa5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 CRTC3Q6UUV7 619 aa5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 FAM214BQ7L5A3 538 aa5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 PODNQ7Z5L7 613 aa5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 DDX53Q86TM3 631 aaKnown RBP5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 WDR75Q8IWA0 830 aaKnown RBP5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 IFNL3Q8IZI9 196 aa5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 BEND7Q8N7W2 519 aaPredicted RBP5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 OR2W6PQ8NHA6 318 aa5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 NPLOC4Q8TAT6 608 aa5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 FCRL3Q96P31 734 aaPredicted RBP5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 NACC1Q96RE7 527 aa5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 SMAD5Q99717 465 aaKnown RBP5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 IFT22Q9H7X7 185 aa5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 TMEFF2Q9UIK5 374 aaPredicted RBP5.49□□□□□ -1.53
SPTLC2-204ENST00000556264 CCDC194A0A1B0GVG4 234 aa5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 PRR33A8MZF0 331 aa5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 MEFVO15553 781 aaPredicted RBP5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 PYGMP11217 842 aa5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 IFNGR1P15260 489 aa5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 BPIP17213 487 aa5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 NAT1P18440 290 aa5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 GPR85P60893 370 aa5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 MCL1Q07820 350 aa5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 SART3Q15020 963 aaKnown RBP5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 PPP2R5AQ15172 486 aa5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 LRRC41Q15345 812 aa5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 ACBD5Q5T8D3 534 aaPredicted RBP5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 RSPO2Q6UXX9 243 aaPredicted RBP5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 BEND4Q6ZU67 534 aa5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 SPATS2Q86XZ4 545 aaKnown RBP5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 DZIP1LQ8IYY4 767 aaKnown RBP5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 NXPE1Q8N323 547 aa5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 ENOX1Q8TC92 643 aaKnown RBP5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 COG1Q8WTW3 980 aa5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 C8orf48Q96LL4 319 aa5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 HEXIM2Q96MH2 286 aaKnown RBP5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 TRIM8Q9BZR9 551 aa5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 GEMIN8Q9NWZ8 242 aaKnown RBP5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 GTF2IRD1Q9UHL9 959 aa5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 BACE2Q9Y5Z0 518 aa5.48□□□□□ -1.53
SPTLC2-204ENST00000556264 SHTN1A0MZ66 631 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 ZNF891A8MT65 544 aaPredicted RBP5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 TSPAN6O43657 245 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 PRC1O43663 620 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 ZEB2O60315 1214 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 MSCO60682 206 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 GLRX3O76003 335 aaKnown RBP5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 SRGAP2CP0DJJ0 459 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 PLS3P13797 630 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 VAV1P15498 845 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 LTBRP36941 435 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 SEPHS1P49903 392 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 RAB27AP51159 221 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 NEK2P51955 445 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 TBX4P57082 545 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 TNK2Q07912 1038 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 MBTPS1Q14703 1052 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 LCE2AQ5TA79 106 aaPredicted RBP5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 OGFOD3Q6PK18 319 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 ANKLE2Q86XL3 938 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 KIF18BQ86Y91 864 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 ZC3H7AQ8IWR0 971 aaKnown RBP5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 ZNF655Q8N720 491 aaPredicted RBP5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 IGSF22Q8N9C0 903 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 DAGLBQ8NCG7 672 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 TCTN2Q96GX1 697 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 MEGF10Q96KG7 1140 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 ZFYVE21Q9BQ24 234 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 YIPF4Q9BSR8 244 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 SLC12A9Q9BXP2 914 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 HDAC8Q9BY41 377 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 PUS7LQ9H0K6 701 aaKnown RBP5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 GPR27Q9NS67 375 aa5.47□□□□□ -1.53
SPTLC2-204ENST00000556264 CLEC1BQ9P126 229 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms