RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 DCAF4Q8WV16 495 aa20.05■□□□□ 0.8
XRCC3-215ENST00000555964 PPP1R12CQ9BZL4 782 aa20.05■□□□□ 0.8
XRCC3-215ENST00000555964 VTA1Q9NP79 307 aa20.05■□□□□ 0.8
XRCC3-215ENST00000555964 MSRAQ9UJ68 235 aa20.05■□□□□ 0.8
XRCC3-215ENST00000555964 PNMA2Q9UL42 364 aa20.05■□□□□ 0.8
XRCC3-215ENST00000555964 CCPG1Q9ULG6 757 aa20.05■□□□□ 0.8
XRCC3-215ENST00000555964 GNEQ9Y223 722 aaKnown RBP20.05■□□□□ 0.8
XRCC3-215ENST00000555964 LOC102724159A0A0B4J2E5 919 aa20.04■□□□□ 0.8
XRCC3-215ENST00000555964 CTAGE5O15320 804 aa20.04■□□□□ 0.8
XRCC3-215ENST00000555964 CD4P01730 458 aa20.04■□□□□ 0.8
XRCC3-215ENST00000555964 BEX3Q00994 111 aa20.04■□□□□ 0.8
XRCC3-215ENST00000555964 PWP2Q15269 919 aaKnown RBP20.04■□□□□ 0.8
XRCC3-215ENST00000555964 CCDC96Q2M329 555 aa20.04■□□□□ 0.8
XRCC3-215ENST00000555964 RASIP1Q5U651 963 aa20.04■□□□□ 0.8
XRCC3-215ENST00000555964 CXCL17Q6UXB2 119 aa20.04■□□□□ 0.8
XRCC3-215ENST00000555964 KCTD1Q719H9 257 aa20.04■□□□□ 0.8
XRCC3-215ENST00000555964 HIPK3Q9H422 1215 aa20.04■□□□□ 0.8
XRCC3-215ENST00000555964 IL23AQ9NPF7 189 aa20.04■□□□□ 0.8
XRCC3-215ENST00000555964 ADD3Q9UEY8 706 aaKnown RBP20.04■□□□□ 0.8
XRCC3-215ENST00000555964 PRR12Q9ULL5 1215 aa20.04■□□□□ 0.8
XRCC3-215ENST00000555964 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.04■□□□□ 0.8
XRCC3-215ENST00000555964 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.03■□□□□ 0.8
XRCC3-215ENST00000555964 SOWAHBA6NEL2 793 aa20.03■□□□□ 0.8
XRCC3-215ENST00000555964 RANBP6O60518 1105 aaKnown RBP20.03■□□□□ 0.8
XRCC3-215ENST00000555964 ICAM1P05362 532 aa20.03■□□□□ 0.8
XRCC3-215ENST00000555964 IRX5P78411 483 aaPredicted RBP20.03■□□□□ 0.8
XRCC3-215ENST00000555964 ITGA7Q13683 1181 aa20.03■□□□□ 0.8
XRCC3-215ENST00000555964 ZNF365Q70YC5 407 aa20.03■□□□□ 0.8
XRCC3-215ENST00000555964 SLC43A3Q8NBI5 491 aa20.03■□□□□ 0.8
XRCC3-215ENST00000555964 HERVK_113Q902F9 699 aa20.03■□□□□ 0.8
XRCC3-215ENST00000555964 CYP39A1Q9NYL5 469 aa20.03■□□□□ 0.8
XRCC3-215ENST00000555964 ANAPC4Q9UJX5 808 aa20.03■□□□□ 0.8
XRCC3-215ENST00000555964 LCTP09848 1927 aa20.03■□□□□ 0.8
XRCC3-215ENST00000555964 TJAP1Q5JTD0 557 aa20.02■□□□□ 0.8
XRCC3-215ENST00000555964 NSMFQ6X4W1 530 aa20.02■□□□□ 0.8
XRCC3-215ENST00000555964 MPHOSPH6Q99547 160 aaKnown RBP20.02■□□□□ 0.8
XRCC3-215ENST00000555964 PBX4Q9BYU1 374 aa20.02■□□□□ 0.8
XRCC3-215ENST00000555964 GBF1Q92538 1859 aa20.02■□□□□ 0.8
XRCC3-215ENST00000555964 ASTN1O14525 1302 aa20.02■□□□□ 0.79
XRCC3-215ENST00000555964 DYNC1LI2O43237 492 aaPredicted RBP20.01■□□□□ 0.79
XRCC3-215ENST00000555964 ORC4O43929 436 aa20.01■□□□□ 0.79
XRCC3-215ENST00000555964 ACRP10323 421 aa20.01■□□□□ 0.79
XRCC3-215ENST00000555964 SMPD1P17405 629 aa20.01■□□□□ 0.79
XRCC3-215ENST00000555964 CYP2C18P33260 490 aa20.01■□□□□ 0.79
XRCC3-215ENST00000555964 AKNAD1Q5T1N1 836 aa20.01■□□□□ 0.79
XRCC3-215ENST00000555964 C16orf59Q7L2K0 433 aa20.01■□□□□ 0.79
XRCC3-215ENST00000555964 TICAM2Q86XR7 235 aa20.01■□□□□ 0.79
XRCC3-215ENST00000555964 FBXO16Q8IX29 292 aaPredicted RBP20.01■□□□□ 0.79
XRCC3-215ENST00000555964 RPUSD2Q8IZ73 545 aaKnown RBP20.01■□□□□ 0.79
XRCC3-215ENST00000555964 EVI5LQ96CN4 794 aa20.01■□□□□ 0.79
XRCC3-215ENST00000555964 IL17RBQ9NRM6 502 aa20.01■□□□□ 0.79
XRCC3-215ENST00000555964 FGBP02675 491 aa20■□□□□ 0.79
XRCC3-215ENST00000555964 CTDSPL2Q05D32 466 aa20■□□□□ 0.79
XRCC3-215ENST00000555964 MORC4Q8TE76 937 aa20■□□□□ 0.79
XRCC3-215ENST00000555964 CHMP4CQ96CF2 233 aa20■□□□□ 0.79
XRCC3-215ENST00000555964 RANBP17Q9H2T7 1088 aaKnown RBP20■□□□□ 0.79
XRCC3-215ENST00000555964 HELLSQ9NRZ9 838 aa20■□□□□ 0.79
XRCC3-215ENST00000555964 TOMM22Q9NS69 142 aa20■□□□□ 0.79
XRCC3-215ENST00000555964 VCANP13611 3396 aa20■□□□□ 0.79
XRCC3-215ENST00000555964 SUPT20HL2P0C7V6 817 aa19.99■□□□□ 0.79
XRCC3-215ENST00000555964 TOP1P11387 765 aaKnown RBP19.99■□□□□ 0.79
XRCC3-215ENST00000555964 NOVP48745 357 aa19.99■□□□□ 0.79
XRCC3-215ENST00000555964 ALX1Q15699 326 aa19.99■□□□□ 0.79
XRCC3-215ENST00000555964 DUSP28Q4G0W2 176 aa19.99■□□□□ 0.79
XRCC3-215ENST00000555964 BRDTQ58F21 947 aaPredicted RBP19.99■□□□□ 0.79
XRCC3-215ENST00000555964 MUM1L1Q5H9M0 696 aa19.99■□□□□ 0.79
XRCC3-215ENST00000555964 KIAA1211Q6ZU35 1233 aa19.99■□□□□ 0.79
XRCC3-215ENST00000555964 OTUD7AQ8TE49 926 aaPredicted RBP19.99■□□□□ 0.79
XRCC3-215ENST00000555964 POLR3EQ9NVU0 708 aa19.99■□□□□ 0.79
XRCC3-215ENST00000555964 MTMR7Q9Y216 660 aa19.99■□□□□ 0.79
XRCC3-215ENST00000555964 EYSQ5T1H1 3165 aa19.99■□□□□ 0.79
XRCC3-215ENST00000555964 RAD50Q92878 1312 aa19.99■□□□□ 0.79
XRCC3-215ENST00000555964 NCOR1O75376 2440 aa19.98■□□□□ 0.79
XRCC3-215ENST00000555964 NMT2O60551 498 aa19.98■□□□□ 0.79
XRCC3-215ENST00000555964 PFKMP08237 780 aa19.98■□□□□ 0.79
XRCC3-215ENST00000555964 PBX2P40425 430 aa19.98■□□□□ 0.79
XRCC3-215ENST00000555964 CPT1AP50416 773 aa19.98■□□□□ 0.79
XRCC3-215ENST00000555964 SYDE2Q5VT97 1194 aa19.98■□□□□ 0.79
XRCC3-215ENST00000555964 TAPT1Q6NXT6 567 aa19.98■□□□□ 0.79
XRCC3-215ENST00000555964 BTNL9Q6UXG8 535 aa19.98■□□□□ 0.79
XRCC3-215ENST00000555964 EEPD1Q7L9B9 569 aa19.98■□□□□ 0.79
XRCC3-215ENST00000555964 NOC4LQ9BVI4 516 aaKnown RBP19.98■□□□□ 0.79
XRCC3-215ENST00000555964 PCDHB15Q9Y5E8 787 aa19.98■□□□□ 0.79
XRCC3-215ENST00000555964 GRXCR1A8MXD5 290 aa19.97■□□□□ 0.79
XRCC3-215ENST00000555964 B4DLN1 442 aa19.97■□□□□ 0.79
XRCC3-215ENST00000555964 FGRP09769 529 aa19.97■□□□□ 0.79
XRCC3-215ENST00000555964 PCP11498 1178 aaKnown RBP19.97■□□□□ 0.79
XRCC3-215ENST00000555964 ALDH5A1P51649 535 aaPredicted RBP19.97■□□□□ 0.79
XRCC3-215ENST00000555964 MRPL12P52815 198 aaKnown RBP19.97■□□□□ 0.79
XRCC3-215ENST00000555964 SNAP25P60880 206 aa19.97■□□□□ 0.79
XRCC3-215ENST00000555964 SLC28A3Q9HAS3 691 aa19.97■□□□□ 0.79
XRCC3-215ENST00000555964 GPHNQ9NQX3 736 aaPredicted RBP19.97■□□□□ 0.79
XRCC3-215ENST00000555964 PDGFCQ9NRA1 345 aa19.97■□□□□ 0.79
XRCC3-215ENST00000555964 ZMYM6O95789 1325 aa19.97■□□□□ 0.79
XRCC3-215ENST00000555964 SCN10AQ9Y5Y9 1956 aa19.96■□□□□ 0.79
XRCC3-215ENST00000555964 PRUNE2Q8WUY3 3088 aa19.96■□□□□ 0.79
XRCC3-215ENST00000555964 PTPDC1A2A3K4 754 aa19.96■□□□□ 0.79
XRCC3-215ENST00000555964 NKRFO15226 690 aaKnown RBP eCLIP19.96■□□□□ 0.79
XRCC3-215ENST00000555964 FOXP2O15409 715 aa19.96■□□□□ 0.79
XRCC3-215ENST00000555964 B4GALT4O60513 344 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms