RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 GRM4Q14833 912 aa13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 SNX17Q15036 470 aa13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 MORN1Q5T089 497 aa13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 SH3RF1Q7Z6J0 888 aa13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 NECAB1Q8N987 351 aa13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 LPAR1Q92633 364 aa13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 TRIM43Q96BQ3 446 aaPredicted RBP13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 RNPC3Q96LT9 517 aaKnown RBP13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 SLKQ9H2G2 1235 aaPredicted RBP13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 EPHX3Q9H6B9 360 aa13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 SH2D4AQ9H788 454 aa13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 NCOA5Q9HCD5 579 aaKnown RBP13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 PRDM5Q9NQX1 630 aaPredicted RBP13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 REV3LO60673 3130 aa13.64□□□□□ -0.23
MTHFD1-211ENST00000555709 PARP14Q460N5 1801 aa13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 NDUFB10O96000 172 aa13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 PDHBP11177 359 aa13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 BMP1P13497 986 aa13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 ITGB8P26012 769 aa13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 CDC27P30260 824 aa13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 RTN1Q16799 776 aa13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 SLC39A5Q6ZMH5 540 aa13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 SYNE3Q6ZMZ3 975 aa13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 CCDC83Q8IWF9 413 aa13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 CCDC144CPQ8IYA2 1237 aa13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 FANCBQ8NB91 859 aa13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 ZNF280CQ8ND82 737 aa13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 NUP133Q8WUM0 1156 aa13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 KIAA1683Q9H0B3 1180 aa13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 VCPKMTQ9H867 229 aa13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 AS3MTQ9HBK9 375 aa13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 TXNRD2Q9NNW7 524 aa13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 DDX20Q9UHI6 824 aaKnown RBP13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 NAP1L2Q9ULW6 460 aaPredicted RBP13.63□□□□□ -0.23
MTHFD1-211ENST00000555709 F5H6K3 240 aa13.62□□□□□ -0.23
MTHFD1-211ENST00000555709 CTDNEP1O95476 244 aa13.62□□□□□ -0.23
MTHFD1-211ENST00000555709 RGS2P41220 211 aa13.62□□□□□ -0.23
MTHFD1-211ENST00000555709 CCT2P78371 535 aaKnown RBP13.62□□□□□ -0.23
MTHFD1-211ENST00000555709 KLRC3Q07444 240 aa13.62□□□□□ -0.23
MTHFD1-211ENST00000555709 SPP2Q13103 211 aa13.62□□□□□ -0.23
MTHFD1-211ENST00000555709 PABPC4Q13310 644 aaKnown RBP eCLIP13.62□□□□□ -0.23
MTHFD1-211ENST00000555709 MTMR2Q13614 643 aa13.62□□□□□ -0.23
MTHFD1-211ENST00000555709 PPP2R5BQ15173 497 aa13.62□□□□□ -0.23
MTHFD1-211ENST00000555709 TRIM60Q495X7 471 aa13.62□□□□□ -0.23
MTHFD1-211ENST00000555709 KIAA1755Q5JYT7 1200 aa13.62□□□□□ -0.23
MTHFD1-211ENST00000555709 TMTC3Q6ZXV5 915 aa13.62□□□□□ -0.23
MTHFD1-211ENST00000555709 DCAF4Q8WV16 495 aa13.62□□□□□ -0.23
MTHFD1-211ENST00000555709 GMCL1Q96IK5 515 aa13.62□□□□□ -0.23
MTHFD1-211ENST00000555709 FEZ1Q99689 392 aa13.62□□□□□ -0.23
MTHFD1-211ENST00000555709 APBA2Q99767 749 aa13.62□□□□□ -0.23
MTHFD1-211ENST00000555709 MAD2L2Q9UI95 211 aa13.62□□□□□ -0.23
MTHFD1-211ENST00000555709 MYH6P13533 1939 aa13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 PALM3A6NDB9 673 aaPredicted RBP13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 USP17L10C9JJH3 530 aa13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 KIF5BP33176 963 aa13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 HMGCS2P54868 508 aa13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 BACE1P56817 501 aa13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 ZNF543Q08ER8 600 aa13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 FUT2Q10981 343 aa13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 ADGRE1Q14246 886 aa13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 NTRK3Q16288 839 aa13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 ASPRV1Q53RT3 343 aa13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 SH3D19Q5HYK7 790 aa13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 SLFN13Q68D06 897 aa13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 NSUN7Q8NE18 718 aaKnown RBP13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 CTCFLQ8NI51 663 aaPredicted RBP13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 TIFAQ96CG3 184 aa13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 INTS4Q96HW7 963 aaKnown RBP13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 C12orf42Q96LP6 360 aa13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 IPO9Q96P70 1041 aaKnown RBP13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 GAS2L1Q99501 681 aaPredicted RBP13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 PORCNQ9H237 461 aa13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 GOPCQ9HD26 462 aa13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 RBM28Q9NW13 759 aaKnown RBP13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 FLRT1Q9NZU1 646 aa13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 CHD7Q9P2D1 2997 aa13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 BAZ2BQ9UIF8 2168 aaKnown RBP13.61□□□□□ -0.23
MTHFD1-211ENST00000555709 CCDC196A0A1B0GTZ2 297 aa13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 DHX16O60231 1041 aaKnown RBP13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 MSCO60682 206 aa13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 PLEKHA8P1O95397 391 aa13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 PARP1P09874 1014 aaKnown RBP13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 MAPK4P31152 587 aa13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 ADD1P35611 737 aaKnown RBP13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 SLC4A3P48751 1232 aa13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 SLC35G1Q2M3R5 365 aa13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 Q3C1V9 767 aa13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 USP17L2Q6R6M4 530 aa13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 GPR142Q7Z601 462 aa13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 STAG2Q8N3U4 1231 aa13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 GPRC5AQ8NFJ5 357 aa13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 SMARCC2Q8TAQ2 1214 aa13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 P2RX7Q99572 595 aaKnown RBP13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 LLPHQ9BRT6 129 aaKnown RBP13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 PRDM12Q9H4Q4 367 aa13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 C11orf16Q9NQ32 467 aa13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 EMILIN3Q9NT22 766 aa13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 RBPJLQ9UBG7 517 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms