RNA–Protein interactions for RNA: ENST00000555690.5

PPP4R4-204, Transcript of protein phosphatase 4 regulatory subunit 4, human

TSL 3

Gene PPP4R4, Length 680 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R4-204	ENST00000555690	CTAGE5	O15320	804 aa		28.85	■■■□□ 2.21
PPP4R4-204	ENST00000555690	HSPD1	P10809	573 aa	Known RBP	28.85	■■■□□ 2.21
PPP4R4-204	ENST00000555690	SLC16A2	P36021	539 aa		28.85	■■■□□ 2.21
PPP4R4-204	ENST00000555690	CDK7	P50613	346 aa		28.85	■■■□□ 2.21
PPP4R4-204	ENST00000555690	SEMA6B	Q9H3T3	888 aa		28.85	■■■□□ 2.21
PPP4R4-204	ENST00000555690	CYP39A1	Q9NYL5	469 aa		28.85	■■■□□ 2.21
PPP4R4-204	ENST00000555690	ASTN1	O14525	1302 aa		28.85	■■■□□ 2.21
PPP4R4-204	ENST00000555690	BEX3	Q00994	111 aa		28.84	■■■□□ 2.21
PPP4R4-204	ENST00000555690	NSMF	Q6X4W1	530 aa		28.84	■■■□□ 2.21
PPP4R4-204	ENST00000555690	TMEM47	Q9BQJ4	181 aa		28.84	■■■□□ 2.21
PPP4R4-204	ENST00000555690	TBX21	Q9UL17	535 aa		28.84	■■■□□ 2.21
PPP4R4-204	ENST00000555690		A0A0U1RQG5	324 aa	Predicted RBP	28.83	■■■□□ 2.21
PPP4R4-204	ENST00000555690	ARVCF	O00192	962 aa		28.83	■■■□□ 2.21
PPP4R4-204	ENST00000555690	TIMP1	P01033	207 aa		28.83	■■■□□ 2.21
PPP4R4-204	ENST00000555690	ICAM1	P05362	532 aa		28.83	■■■□□ 2.21
PPP4R4-204	ENST00000555690	TOP1	P11387	765 aa	Known RBP	28.83	■■■□□ 2.21
PPP4R4-204	ENST00000555690	HAND2	P61296	217 aa		28.83	■■■□□ 2.21
PPP4R4-204	ENST00000555690	TICAM2	Q86XR7	235 aa		28.83	■■■□□ 2.21
PPP4R4-204	ENST00000555690	RILPL2	Q969X0	211 aa		28.83	■■■□□ 2.21
PPP4R4-204	ENST00000555690	PURB	Q96QR8	312 aa	Known RBP	28.83	■■■□□ 2.21
PPP4R4-204	ENST00000555690	CDX2	Q99626	313 aa	Predicted RBP	28.83	■■■□□ 2.21
PPP4R4-204	ENST00000555690	MROH7	Q68CQ1	1323 aa		28.83	■■■□□ 2.21
PPP4R4-204	ENST00000555690	CDH23	Q9H251	3354 aa		28.82	■■■□□ 2.2
PPP4R4-204	ENST00000555690	NKX3-2	P78367	333 aa		28.82	■■■□□ 2.2
PPP4R4-204	ENST00000555690	B4GALNT3	Q6L9W6	998 aa		28.82	■■■□□ 2.2
PPP4R4-204	ENST00000555690	EEPD1	Q7L9B9	569 aa		28.82	■■■□□ 2.2
PPP4R4-204	ENST00000555690	RANBP17	Q9H2T7	1088 aa	Known RBP	28.82	■■■□□ 2.2
PPP4R4-204	ENST00000555690	PDGFC	Q9NRA1	345 aa		28.82	■■■□□ 2.2
PPP4R4-204	ENST00000555690	TCP11L1	Q9NUJ3	509 aa		28.82	■■■□□ 2.2
PPP4R4-204	ENST00000555690	GNE	Q9Y223	722 aa	Known RBP	28.82	■■■□□ 2.2
PPP4R4-204	ENST00000555690	EYS	Q5T1H1	3165 aa		28.81	■■■□□ 2.2
PPP4R4-204	ENST00000555690	CUL9	Q8IWT3	2517 aa		28.81	■■■□□ 2.2
PPP4R4-204	ENST00000555690	FRMPD2	Q68DX3	1309 aa	Predicted RBP	28.81	■■■□□ 2.2
PPP4R4-204	ENST00000555690	PTGS1	P23219	599 aa		28.81	■■■□□ 2.2
PPP4R4-204	ENST00000555690	SYDE2	Q5VT97	1194 aa		28.81	■■■□□ 2.2
PPP4R4-204	ENST00000555690	BTNL9	Q6UXG8	535 aa		28.81	■■■□□ 2.2
PPP4R4-204	ENST00000555690	TTYH1	Q9H313	450 aa	Predicted RBP	28.81	■■■□□ 2.2
PPP4R4-204	ENST00000555690	GPCPD1	Q9NPB8	672 aa		28.81	■■■□□ 2.2
PPP4R4-204	ENST00000555690	ZMYM6	O95789	1325 aa		28.8	■■■□□ 2.2
PPP4R4-204	ENST00000555690	CCDC171	Q6TFL3	1326 aa		28.8	■■■□□ 2.2
PPP4R4-204	ENST00000555690	SMPD1	P17405	629 aa		28.8	■■■□□ 2.2
PPP4R4-204	ENST00000555690	TLK2	Q86UE8	772 aa		28.8	■■■□□ 2.2
PPP4R4-204	ENST00000555690	MFSD5	Q6N075	450 aa		28.79	■■■□□ 2.2
PPP4R4-204	ENST00000555690	TAPT1	Q6NXT6	567 aa		28.79	■■■□□ 2.2
PPP4R4-204	ENST00000555690	CXCL17	Q6UXB2	119 aa		28.79	■■■□□ 2.2
PPP4R4-204	ENST00000555690	FBXO16	Q8IX29	292 aa	Predicted RBP	28.79	■■■□□ 2.2
PPP4R4-204	ENST00000555690	SMC5	Q8IY18	1101 aa		28.79	■■■□□ 2.2
PPP4R4-204	ENST00000555690	AP5M1	Q9H0R1	490 aa		28.79	■■■□□ 2.2
PPP4R4-204	ENST00000555690	DYNC1LI2	O43237	492 aa	Predicted RBP	28.78	■■■□□ 2.2
PPP4R4-204	ENST00000555690	BAAT	Q14032	418 aa	Predicted RBP	28.78	■■■□□ 2.2
PPP4R4-204	ENST00000555690	FSCN1	Q16658	493 aa	Known RBP	28.78	■■■□□ 2.2
PPP4R4-204	ENST00000555690	AKNAD1	Q5T1N1	836 aa		28.78	■■■□□ 2.2
PPP4R4-204	ENST00000555690	TMEM63B	Q5T3F8	832 aa		28.78	■■■□□ 2.2
PPP4R4-204	ENST00000555690	MFSD6	Q6ZSS7	791 aa		28.78	■■■□□ 2.2
PPP4R4-204	ENST00000555690	FAM126B	Q8IXS8	530 aa		28.78	■■■□□ 2.2
PPP4R4-204	ENST00000555690	RWDD1	Q9H446	243 aa	Predicted RBP	28.78	■■■□□ 2.2
PPP4R4-204	ENST00000555690	NFIB	O00712	420 aa		28.77	■■■□□ 2.2
PPP4R4-204	ENST00000555690	PDHB	P11177	359 aa		28.77	■■■□□ 2.2
PPP4R4-204	ENST00000555690	IQSEC1	Q6DN90	963 aa		28.77	■■■□□ 2.2
PPP4R4-204	ENST00000555690	TBC1D10C	Q8IV04	446 aa		28.77	■■■□□ 2.2
PPP4R4-204	ENST00000555690	YTHDC1	Q96MU7	727 aa	Known RBP	28.77	■■■□□ 2.2
PPP4R4-204	ENST00000555690	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	28.77	■■■□□ 2.2
PPP4R4-204	ENST00000555690	TLR3	O15455	904 aa	Known RBP	28.76	■■■□□ 2.19
PPP4R4-204	ENST00000555690	SDS	P20132	328 aa		28.76	■■■□□ 2.19
PPP4R4-204	ENST00000555690	AAMP	Q13685	434 aa		28.76	■■■□□ 2.19
PPP4R4-204	ENST00000555690	C16orf59	Q7L2K0	433 aa		28.76	■■■□□ 2.19
PPP4R4-204	ENST00000555690	PPP1R12C	Q9BZL4	782 aa		28.76	■■■□□ 2.19
PPP4R4-204	ENST00000555690	VTA1	Q9NP79	307 aa		28.76	■■■□□ 2.19
PPP4R4-204	ENST00000555690	PTPDC1	A2A3K4	754 aa		28.75	■■■□□ 2.19
PPP4R4-204	ENST00000555690	KIAA1211	Q6ZU35	1233 aa		28.75	■■■□□ 2.19
PPP4R4-204	ENST00000555690	CHD1L	Q86WJ1	897 aa		28.75	■■■□□ 2.19
PPP4R4-204	ENST00000555690	PLEKHM2	Q8IWE5	1019 aa		28.75	■■■□□ 2.19
PPP4R4-204	ENST00000555690	MORC4	Q8TE76	937 aa		28.75	■■■□□ 2.19
PPP4R4-204	ENST00000555690	MYLIP	Q8WY64	445 aa		28.75	■■■□□ 2.19
PPP4R4-204	ENST00000555690	TTC14	Q96N46	770 aa		28.75	■■■□□ 2.19
PPP4R4-204	ENST00000555690	PRUNE2	Q8WUY3	3088 aa		28.74	■■■□□ 2.19
PPP4R4-204	ENST00000555690	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	28.74	■■■□□ 2.19
PPP4R4-204	ENST00000555690	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	28.74	■■■□□ 2.19
PPP4R4-204	ENST00000555690	CABYR	O75952	493 aa		28.74	■■■□□ 2.19
PPP4R4-204	ENST00000555690	CD4	P01730	458 aa		28.74	■■■□□ 2.19
PPP4R4-204	ENST00000555690	IGHD	P01880	384 aa		28.74	■■■□□ 2.19
PPP4R4-204	ENST00000555690	PC	P11498	1178 aa	Known RBP	28.74	■■■□□ 2.19
PPP4R4-204	ENST00000555690	CSF2RA	P15509	400 aa		28.74	■■■□□ 2.19
PPP4R4-204	ENST00000555690	ZNF543	Q08ER8	600 aa		28.74	■■■□□ 2.19
PPP4R4-204	ENST00000555690	PPIG	Q13427	754 aa	Known RBP eCLIP	28.74	■■■□□ 2.19	1e-6	■■□□□ 13.3
PPP4R4-204	ENST00000555690	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	28.74	■■■□□ 2.19
PPP4R4-204	ENST00000555690	TMEM199	Q8N511	208 aa		28.74	■■■□□ 2.19
PPP4R4-204	ENST00000555690	SLC43A3	Q8NBI5	491 aa		28.74	■■■□□ 2.19
PPP4R4-204	ENST00000555690	ADD3	Q9UEY8	706 aa	Known RBP	28.74	■■■□□ 2.19
PPP4R4-204	ENST00000555690		Q9Y3F1	56 aa		28.74	■■■□□ 2.19
PPP4R4-204	ENST00000555690	LCT	P09848	1927 aa		28.74	■■■□□ 2.19
PPP4R4-204	ENST00000555690	LRRC37A2	A6NM11	1700 aa		28.74	■■■□□ 2.19
PPP4R4-204	ENST00000555690	ZEB2	O60315	1214 aa		28.73	■■■□□ 2.19
PPP4R4-204	ENST00000555690	ALDH5A1	P51649	535 aa	Predicted RBP	28.73	■■■□□ 2.19
PPP4R4-204	ENST00000555690	MFAP1	P55081	439 aa	Known RBP	28.73	■■■□□ 2.19
PPP4R4-204	ENST00000555690	ITGA7	Q13683	1181 aa		28.73	■■■□□ 2.19
PPP4R4-204	ENST00000555690	TMEM240	Q5SV17	173 aa		28.73	■■■□□ 2.19
PPP4R4-204	ENST00000555690	ZKSCAN3	Q9BRR0	538 aa		28.73	■■■□□ 2.19
PPP4R4-204	ENST00000555690	RNF41	Q9H4P4	317 aa	Predicted RBP	28.73	■■■□□ 2.19
PPP4R4-204	ENST00000555690	GRIN2D	O15399	1336 aa		28.72	■■■□□ 2.19

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms