RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 PCDH18Q9HCL0 1135 aa6.27□□□□□ -1.41
SRP54-207ENST00000555535 ZNF536O15090 1300 aa6.26□□□□□ -1.41
SRP54-207ENST00000555535 PF4P02776 101 aa6.26□□□□□ -1.41
SRP54-207ENST00000555535 CTSKP43235 329 aa6.26□□□□□ -1.41
SRP54-207ENST00000555535 RBM10P98175 930 aaKnown RBP6.26□□□□□ -1.41
SRP54-207ENST00000555535 PURAQ00577 322 aaKnown RBP6.26□□□□□ -1.41
SRP54-207ENST00000555535 MEI1Q5TIA1 1274 aa6.26□□□□□ -1.41
SRP54-207ENST00000555535 NLGN2Q8NFZ4 835 aa6.26□□□□□ -1.41
SRP54-207ENST00000555535 TSPAN17Q96FV3 270 aa6.26□□□□□ -1.41
SRP54-207ENST00000555535 ZNF747Q9BV97 191 aa6.26□□□□□ -1.41
SRP54-207ENST00000555535 MEIS1O00470 390 aa6.25□□□□□ -1.41
SRP54-207ENST00000555535 MC3RP41968 323 aa6.25□□□□□ -1.41
SRP54-207ENST00000555535 TRIM26Q12899 539 aaPredicted RBP6.25□□□□□ -1.41
SRP54-207ENST00000555535 PWP1Q13610 501 aa6.25□□□□□ -1.41
SRP54-207ENST00000555535 SLC9A5Q14940 896 aa6.25□□□□□ -1.41
SRP54-207ENST00000555535 FAM26FQ5R3K3 315 aa6.25□□□□□ -1.41
SRP54-207ENST00000555535 CDCP2Q5VXM1 449 aa6.25□□□□□ -1.41
SRP54-207ENST00000555535 CABP7Q86V35 215 aa6.25□□□□□ -1.41
SRP54-207ENST00000555535 SSBP3Q9BWW4 388 aaPredicted RBP6.25□□□□□ -1.41
SRP54-207ENST00000555535 SPATA6Q9NWH7 488 aaPredicted RBP6.25□□□□□ -1.41
SRP54-207ENST00000555535 GFOD1Q9NXC2 390 aa6.25□□□□□ -1.41
SRP54-207ENST00000555535 ST6GALNAC2Q9UJ37 374 aa6.25□□□□□ -1.41
SRP54-207ENST00000555535 FBXL21Q9UKT6 434 aa6.25□□□□□ -1.41
SRP54-207ENST00000555535 MINPP1Q9UNW1 487 aa6.25□□□□□ -1.41
SRP54-207ENST00000555535 HCFC2Q9Y5Z7 792 aa6.25□□□□□ -1.41
SRP54-207ENST00000555535 RGL3Q3MIN7 710 aa6.24□□□□□ -1.41
SRP54-207ENST00000555535 RTP2Q5QGT7 225 aa6.24□□□□□ -1.41
SRP54-207ENST00000555535 CWF19L1Q69YN2 538 aaKnown RBP6.24□□□□□ -1.41
SRP54-207ENST00000555535 CRTC3Q6UUV7 619 aa6.24□□□□□ -1.41
SRP54-207ENST00000555535 RELL1Q8IUW5 271 aa6.24□□□□□ -1.41
SRP54-207ENST00000555535 RHOVQ96L33 236 aa6.24□□□□□ -1.41
SRP54-207ENST00000555535 MKRN2Q9H000 416 aaKnown RBP6.24□□□□□ -1.41
SRP54-207ENST00000555535 WDR26Q9H7D7 661 aa6.24□□□□□ -1.41
SRP54-207ENST00000555535 NUDT5Q9UKK9 219 aa6.24□□□□□ -1.41
SRP54-207ENST00000555535 INVSQ9Y283 1065 aa6.24□□□□□ -1.41
SRP54-207ENST00000555535 GSTM1P09488 218 aa6.23□□□□□ -1.41
SRP54-207ENST00000555535 PMLP29590 882 aa6.23□□□□□ -1.41
SRP54-207ENST00000555535 CACNB2Q08289 660 aaPredicted RBP6.23□□□□□ -1.41
SRP54-207ENST00000555535 CWF19L2Q2TBE0 894 aaKnown RBP6.23□□□□□ -1.41
SRP54-207ENST00000555535 SNAP47Q5SQN1 464 aa6.23□□□□□ -1.41
SRP54-207ENST00000555535 USP48Q86UV5 1035 aa6.23□□□□□ -1.41
SRP54-207ENST00000555535 SMARCC2Q8TAQ2 1214 aa6.23□□□□□ -1.41
SRP54-207ENST00000555535 ZBTB8AQ96BR9 441 aa6.23□□□□□ -1.41
SRP54-207ENST00000555535 TMEM74Q96NL1 305 aa6.23□□□□□ -1.41
SRP54-207ENST00000555535 KLC2Q9H0B6 622 aa6.23□□□□□ -1.41
SRP54-207ENST00000555535 PLA2G2DQ9UNK4 145 aa6.23□□□□□ -1.41
SRP54-207ENST00000555535 ROBO2Q9HCK4 1378 aa6.22□□□□□ -1.41
SRP54-207ENST00000555535 MROH6A6NGR9 719 aa6.22□□□□□ -1.41
SRP54-207ENST00000555535 ATE1O95260 518 aa6.22□□□□□ -1.41
SRP54-207ENST00000555535 NOP2P46087 812 aaKnown RBP6.22□□□□□ -1.41
SRP54-207ENST00000555535 CDSNQ15517 529 aa6.22□□□□□ -1.41
SRP54-207ENST00000555535 PLEKHH3Q7Z736 793 aa6.22□□□□□ -1.41
SRP54-207ENST00000555535 LINC00482Q8N8I6 264 aa6.22□□□□□ -1.41
SRP54-207ENST00000555535 PEX11GQ96HA9 241 aa6.22□□□□□ -1.41
SRP54-207ENST00000555535 DSCC1Q9BVC3 393 aa6.22□□□□□ -1.41
SRP54-207ENST00000555535 SRRTQ9BXP5 876 aaKnown RBP6.22□□□□□ -1.41
SRP54-207ENST00000555535 CNNM2Q9H8M5 875 aa6.22□□□□□ -1.41
SRP54-207ENST00000555535 ZBTB7AO95365 584 aa6.21□□□□□ -1.42
SRP54-207ENST00000555535 TBC1D8O95759 1140 aa6.21□□□□□ -1.42
SRP54-207ENST00000555535 RPL13P26373 211 aaKnown RBP6.21□□□□□ -1.42
SRP54-207ENST00000555535 AUHQ13825 339 aaKnown RBP6.21□□□□□ -1.42
SRP54-207ENST00000555535 NOX5Q96PH1 765 aa6.21□□□□□ -1.42
SRP54-207ENST00000555535 SLC12A9Q9BXP2 914 aa6.21□□□□□ -1.42
SRP54-207ENST00000555535 SEMA4AQ9H3S1 761 aa6.21□□□□□ -1.42
SRP54-207ENST00000555535 USP31Q70CQ4 1352 aa6.2□□□□□ -1.42
SRP54-207ENST00000555535 FGF10O15520 208 aaPredicted RBP6.2□□□□□ -1.42
SRP54-207ENST00000555535 BRD1O95696 1058 aa6.2□□□□□ -1.42
SRP54-207ENST00000555535 AMHP03971 560 aa6.2□□□□□ -1.42
SRP54-207ENST00000555535 GLI4P10075 376 aa6.2□□□□□ -1.42
SRP54-207ENST00000555535 L1CAMP32004 1257 aa6.2□□□□□ -1.42
SRP54-207ENST00000555535 GBP2P32456 591 aaPredicted RBP6.2□□□□□ -1.42
SRP54-207ENST00000555535 TGFB2P61812 414 aa6.2□□□□□ -1.42
SRP54-207ENST00000555535 OVOS1Q6IE37 1185 aa6.2□□□□□ -1.42
SRP54-207ENST00000555535 C14orf37Q86TY3 774 aa6.2□□□□□ -1.42
SRP54-207ENST00000555535 DUSP9Q99956 384 aaKnown RBP6.2□□□□□ -1.42
SRP54-207ENST00000555535 RSRP1Q9BUV0 290 aa6.2□□□□□ -1.42
SRP54-207ENST00000555535 CYP2C8P10632 490 aa6.19□□□□□ -1.42
SRP54-207ENST00000555535 POLR2BP30876 1174 aaKnown RBP6.19□□□□□ -1.42
SRP54-207ENST00000555535 FAM196AQ6ZSG2 479 aa6.19□□□□□ -1.42
SRP54-207ENST00000555535 NLRC3Q7RTR2 1065 aa6.19□□□□□ -1.42
SRP54-207ENST00000555535 LIMS2Q7Z4I7 341 aa6.19□□□□□ -1.42
SRP54-207ENST00000555535 GOLM1Q8NBJ4 401 aa6.19□□□□□ -1.42
SRP54-207ENST00000555535 NETO2Q8NC67 525 aa6.19□□□□□ -1.42
SRP54-207ENST00000555535 ZNF512BQ96KM6 892 aaPredicted RBP6.19□□□□□ -1.42
SRP54-207ENST00000555535 PCDHB14Q9Y5E9 798 aa6.19□□□□□ -1.42
SRP54-207ENST00000555535 HS3ST3A1Q9Y663 406 aa6.19□□□□□ -1.42
SRP54-207ENST00000555535 LAMTOR5O43504 91 aa6.18□□□□□ -1.42
SRP54-207ENST00000555535 TACR1P25103 407 aa6.18□□□□□ -1.42
SRP54-207ENST00000555535 SMN1Q16637 294 aaKnown RBP6.18□□□□□ -1.42
SRP54-207ENST00000555535 LRRC3Q9BY71 257 aa6.18□□□□□ -1.42
SRP54-207ENST00000555535 KLF10Q13118 480 aa6.17□□□□□ -1.42
SRP54-207ENST00000555535 LRRFIP1Q32MZ4 808 aaKnown RBP6.17□□□□□ -1.42
SRP54-207ENST00000555535 ATG4CQ96DT6 458 aa6.17□□□□□ -1.42
SRP54-207ENST00000555535 DHRS1Q96LJ7 313 aa6.17□□□□□ -1.42
SRP54-207ENST00000555535 DEF6Q9H4E7 631 aa6.17□□□□□ -1.42
SRP54-207ENST00000555535 C11orf21Q9P2W6 132 aa6.17□□□□□ -1.42
SRP54-207ENST00000555535 C9orf118A6NHY6 69 aa6.16□□□□□ -1.42
SRP54-207ENST00000555535 THBS2P35442 1172 aa6.16□□□□□ -1.42
SRP54-207ENST00000555535 SELENOPP49908 381 aa6.16□□□□□ -1.42
SRP54-207ENST00000555535 SMAD4Q13485 552 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms