RNA–Protein interactions for RNA: ENST00000555451.1

XRCC3-213, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-213ENST00000555451 ADALQ6DHV7 355 aa12.72□□□□□ -0.37
XRCC3-213ENST00000555451 CAVIN1Q6NZI2 390 aaKnown RBP12.72□□□□□ -0.37
XRCC3-213ENST00000555451 PRPF38AQ8NAV1 312 aaKnown RBP12.72□□□□□ -0.37
XRCC3-213ENST00000555451 CCDC102AQ96A19 550 aa12.72□□□□□ -0.37
XRCC3-213ENST00000555451 KIFC2Q96AC6 838 aa12.72□□□□□ -0.37
XRCC3-213ENST00000555451 SLF1Q9BQI6 1058 aa12.72□□□□□ -0.37
XRCC3-213ENST00000555451 TMOD4Q9NZQ9 345 aa12.72□□□□□ -0.37
XRCC3-213ENST00000555451 PNMA2Q9UL42 364 aa12.72□□□□□ -0.37
XRCC3-213ENST00000555451 PCDHA7Q9UN72 937 aa12.72□□□□□ -0.37
XRCC3-213ENST00000555451 AFG3L2Q9Y4W6 797 aa12.72□□□□□ -0.37
XRCC3-213ENST00000555451 PCDHB6Q9Y5E3 794 aa12.72□□□□□ -0.37
XRCC3-213ENST00000555451 PARP14Q460N5 1801 aa12.72□□□□□ -0.37
XRCC3-213ENST00000555451 THSD7BQ9C0I4 1608 aa12.71□□□□□ -0.37
XRCC3-213ENST00000555451 CUTAO60888 179 aa12.71□□□□□ -0.37
XRCC3-213ENST00000555451 CLK2P49760 499 aaKnown RBP12.71□□□□□ -0.37
XRCC3-213ENST00000555451 ZNF157P51786 506 aaPredicted RBP12.71□□□□□ -0.37
XRCC3-213ENST00000555451 ORC2Q13416 577 aaPredicted RBP12.71□□□□□ -0.37
XRCC3-213ENST00000555451 TTLL12Q14166 644 aaPredicted RBP12.71□□□□□ -0.37
XRCC3-213ENST00000555451 PAXIP1Q6ZW49 1069 aaPredicted RBP12.71□□□□□ -0.37
XRCC3-213ENST00000555451 RASGRP4Q8TDF6 673 aa12.71□□□□□ -0.37
XRCC3-213ENST00000555451 PSTPIP2Q9H939 334 aa12.71□□□□□ -0.37
XRCC3-213ENST00000555451 TMEM63CQ9P1W3 806 aa12.71□□□□□ -0.37
XRCC3-213ENST00000555451 PTPRFP10586 1907 aa12.7□□□□□ -0.38
XRCC3-213ENST00000555451 ABCB11O95342 1321 aa12.7□□□□□ -0.38
XRCC3-213ENST00000555451 ADAMTS3O15072 1205 aa12.7□□□□□ -0.38
XRCC3-213ENST00000555451 SLC10A3P09131 477 aa12.7□□□□□ -0.38
XRCC3-213ENST00000555451 ATP2B1P20020 1258 aa12.7□□□□□ -0.38
XRCC3-213ENST00000555451 PPATQ06203 517 aa12.7□□□□□ -0.38
XRCC3-213ENST00000555451 NOGQ13253 232 aa12.7□□□□□ -0.38
XRCC3-213ENST00000555451 AP3B2Q13367 1082 aa12.7□□□□□ -0.38
XRCC3-213ENST00000555451 NOM1Q5C9Z4 860 aaKnown RBP12.7□□□□□ -0.38
XRCC3-213ENST00000555451 CCDC183Q5T5S1 534 aa12.7□□□□□ -0.38
XRCC3-213ENST00000555451 CCDC73Q6ZRK6 1079 aa12.7□□□□□ -0.38
XRCC3-213ENST00000555451 ERO1BQ86YB8 467 aa12.7□□□□□ -0.38
XRCC3-213ENST00000555451 RASAL3Q86YV0 1011 aa12.7□□□□□ -0.38
XRCC3-213ENST00000555451 CCAR1Q8IX12 1150 aaKnown RBP12.7□□□□□ -0.38
XRCC3-213ENST00000555451 KRI1Q8N9T8 703 aaKnown RBP12.7□□□□□ -0.38
XRCC3-213ENST00000555451 MRPS27Q92552 414 aaKnown RBP12.7□□□□□ -0.38
XRCC3-213ENST00000555451 TANGO6Q9C0B7 1094 aa12.7□□□□□ -0.38
XRCC3-213ENST00000555451 RPAP3Q9H6T3 665 aaPredicted RBP12.7□□□□□ -0.38
XRCC3-213ENST00000555451 DDX19AQ9NUU7 478 aaKnown RBP12.7□□□□□ -0.38
XRCC3-213ENST00000555451 FBXO28Q9NVF7 368 aa12.7□□□□□ -0.38
XRCC3-213ENST00000555451 BIN2Q9UBW5 565 aaPredicted RBP12.7□□□□□ -0.38
XRCC3-213ENST00000555451 PPP1R9AQ9ULJ8 1098 aa12.7□□□□□ -0.38
XRCC3-213ENST00000555451 LOC285556D6RIA3 1793 aa12.7□□□□□ -0.38
XRCC3-213ENST00000555451 SPDYE5A6NIY4 337 aa12.69□□□□□ -0.38
XRCC3-213ENST00000555451 AOC2O75106 756 aa12.69□□□□□ -0.38
XRCC3-213ENST00000555451 FLOT1O75955 427 aa12.69□□□□□ -0.38
XRCC3-213ENST00000555451 ICAM1P05362 532 aa12.69□□□□□ -0.38
XRCC3-213ENST00000555451 PTPREP23469 700 aa12.69□□□□□ -0.38
XRCC3-213ENST00000555451 MARCKSP29966 332 aaPredicted RBP12.69□□□□□ -0.38
XRCC3-213ENST00000555451 HMGCS2P54868 508 aa12.69□□□□□ -0.38
XRCC3-213ENST00000555451 SNAP25P60880 206 aa12.69□□□□□ -0.38
XRCC3-213ENST00000555451 ATP2C1P98194 919 aaPredicted RBP12.69□□□□□ -0.38
XRCC3-213ENST00000555451 GRM1Q13255 1194 aa12.69□□□□□ -0.38
XRCC3-213ENST00000555451 INF2Q27J81 1249 aa12.69□□□□□ -0.38
XRCC3-213ENST00000555451 USH1GQ495M9 461 aa12.69□□□□□ -0.38
XRCC3-213ENST00000555451 AXDND1Q5T1B0 1012 aaPredicted RBP12.69□□□□□ -0.38
XRCC3-213ENST00000555451 JAKMIP3Q5VZ66 844 aa12.69□□□□□ -0.38
XRCC3-213ENST00000555451 NEK8Q86SG6 692 aa12.69□□□□□ -0.38
XRCC3-213ENST00000555451 TNS4Q8IZW8 715 aa12.69□□□□□ -0.38
XRCC3-213ENST00000555451 FERMT2Q96AC1 680 aa12.69□□□□□ -0.38
XRCC3-213ENST00000555451 NAP1L4Q99733 375 aaKnown RBP12.69□□□□□ -0.38
XRCC3-213ENST00000555451 GZF1Q9H116 711 aaPredicted RBP12.69□□□□□ -0.38
XRCC3-213ENST00000555451 WBP1LQ9NX94 342 aa12.69□□□□□ -0.38
XRCC3-213ENST00000555451 MRPL11Q9Y3B7 192 aaKnown RBP12.69□□□□□ -0.38
XRCC3-213ENST00000555451 SRPRBQ9Y5M8 271 aaKnown RBP12.69□□□□□ -0.38
XRCC3-213ENST00000555451 MYPNQ86TC9 1320 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 PIK3CDO00329 1044 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 LAD1O00515 517 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 CXCL11O14625 94 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 ZBED4O75132 1171 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 CAPN15O75808 1086 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 LETM1O95202 739 aaPredicted RBP12.68□□□□□ -0.38
XRCC3-213ENST00000555451 FOSP01100 380 aaPredicted RBP12.68□□□□□ -0.38
XRCC3-213ENST00000555451 LIG1P18858 919 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 CMA1P23946 247 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 MAP2K1Q02750 393 aaPredicted RBP12.68□□□□□ -0.38
XRCC3-213ENST00000555451 FAM160A1Q05DH4 1040 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 GSE1Q14687 1217 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 ZNF174Q15697 407 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 TPRNQ4KMQ1 711 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 ARL6IP4Q66PJ3 421 aaKnown RBP12.68□□□□□ -0.38
XRCC3-213ENST00000555451 CCDC174Q6PII3 467 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 FSIP1Q8NA03 581 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 ZNF579Q8NAF0 562 aaKnown RBP12.68□□□□□ -0.38
XRCC3-213ENST00000555451 TBCKQ8TEA7 893 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 ZIC5Q96T25 663 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 ELP3Q9H9T3 547 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 SLC38A10Q9HBR0 1119 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 TMEM260Q9NX78 707 aa12.68□□□□□ -0.38
XRCC3-213ENST00000555451 FBXO2Q9UK22 296 aaPredicted RBP12.68□□□□□ -0.38
XRCC3-213ENST00000555451 CTDP1Q9Y5B0 961 aaPredicted RBP12.68□□□□□ -0.38
XRCC3-213ENST00000555451 RBBP6Q7Z6E9 1792 aaKnown RBP12.68□□□□□ -0.38
XRCC3-213ENST00000555451 RLFQ13129 1914 aa12.67□□□□□ -0.38
XRCC3-213ENST00000555451 FAM237AA0A1B0GTK4 181 aa12.67□□□□□ -0.38
XRCC3-213ENST00000555451 USP17L15C9J2P7 530 aa12.67□□□□□ -0.38
XRCC3-213ENST00000555451 USP17L13C9JLJ4 530 aa12.67□□□□□ -0.38
XRCC3-213ENST00000555451 USP17L11C9JVI0 530 aa12.67□□□□□ -0.38
XRCC3-213ENST00000555451 USP17L18D6R9N7 530 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms