RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 MX1P20591 662 aa18.32■□□□□ 0.52
NEDD1-207ENST00000555114 RASIP1Q5U651 963 aa18.32■□□□□ 0.52
NEDD1-207ENST00000555114 IQSEC1Q6DN90 963 aa18.32■□□□□ 0.52
NEDD1-207ENST00000555114 CXCL17Q6UXB2 119 aa18.32■□□□□ 0.52
NEDD1-207ENST00000555114 ZNF365Q70YC5 407 aa18.32■□□□□ 0.52
NEDD1-207ENST00000555114 KCTD1Q719H9 257 aa18.32■□□□□ 0.52
NEDD1-207ENST00000555114 PBX4Q9BYU1 374 aa18.32■□□□□ 0.52
NEDD1-207ENST00000555114 HIPK3Q9H422 1215 aa18.32■□□□□ 0.52
NEDD1-207ENST00000555114 IL23AQ9NPF7 189 aa18.32■□□□□ 0.52
NEDD1-207ENST00000555114 CCPG1Q9ULG6 757 aa18.32■□□□□ 0.52
NEDD1-207ENST00000555114 GNEQ9Y223 722 aaKnown RBP18.32■□□□□ 0.52
NEDD1-207ENST00000555114 MCM3APO60318 1980 aa18.31■□□□□ 0.52
NEDD1-207ENST00000555114 CTAGE5O15320 804 aa18.31■□□□□ 0.52
NEDD1-207ENST00000555114 DYNC1LI2O43237 492 aaPredicted RBP18.31■□□□□ 0.52
NEDD1-207ENST00000555114 RANBP6O60518 1105 aaKnown RBP18.31■□□□□ 0.52
NEDD1-207ENST00000555114 ACRP10323 421 aa18.31■□□□□ 0.52
NEDD1-207ENST00000555114 ITGA7Q13683 1181 aa18.31■□□□□ 0.52
NEDD1-207ENST00000555114 CCDC96Q2M329 555 aa18.31■□□□□ 0.52
NEDD1-207ENST00000555114 TJAP1Q5JTD0 557 aa18.31■□□□□ 0.52
NEDD1-207ENST00000555114 C16orf59Q7L2K0 433 aa18.31■□□□□ 0.52
NEDD1-207ENST00000555114 SLC43A3Q8NBI5 491 aa18.31■□□□□ 0.52
NEDD1-207ENST00000555114 DCAF4Q8WV16 495 aa18.31■□□□□ 0.52
NEDD1-207ENST00000555114 CHMP4CQ96CF2 233 aa18.31■□□□□ 0.52
NEDD1-207ENST00000555114 VTA1Q9NP79 307 aa18.31■□□□□ 0.52
NEDD1-207ENST00000555114 CYP39A1Q9NYL5 469 aa18.31■□□□□ 0.52
NEDD1-207ENST00000555114 ADD3Q9UEY8 706 aaKnown RBP18.31■□□□□ 0.52
NEDD1-207ENST00000555114 PRR12Q9ULL5 1215 aa18.31■□□□□ 0.52
NEDD1-207ENST00000555114 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.31■□□□□ 0.52
NEDD1-207ENST00000555114 FGBP02675 491 aa18.3■□□□□ 0.52
NEDD1-207ENST00000555114 SMPD1P17405 629 aa18.3■□□□□ 0.52
NEDD1-207ENST00000555114 CYP2C18P33260 490 aa18.3■□□□□ 0.52
NEDD1-207ENST00000555114 NSMFQ6X4W1 530 aa18.3■□□□□ 0.52
NEDD1-207ENST00000555114 HERVK_113Q902F9 699 aa18.3■□□□□ 0.52
NEDD1-207ENST00000555114 PNMA2Q9UL42 364 aa18.3■□□□□ 0.52
NEDD1-207ENST00000555114 MTMR7Q9Y216 660 aa18.3■□□□□ 0.52
NEDD1-207ENST00000555114 ASTN1O14525 1302 aa18.29■□□□□ 0.52
NEDD1-207ENST00000555114 LOC102724159A0A0B4J2E5 919 aa18.29■□□□□ 0.52
NEDD1-207ENST00000555114 ICAM1P05362 532 aa18.29■□□□□ 0.52
NEDD1-207ENST00000555114 CTDSPL2Q05D32 466 aa18.29■□□□□ 0.52
NEDD1-207ENST00000555114 PWP2Q15269 919 aaKnown RBP18.29■□□□□ 0.52
NEDD1-207ENST00000555114 KIAA1211Q6ZU35 1233 aa18.29■□□□□ 0.52
NEDD1-207ENST00000555114 EEPD1Q7L9B9 569 aa18.29■□□□□ 0.52
NEDD1-207ENST00000555114 FBXO16Q8IX29 292 aaPredicted RBP18.29■□□□□ 0.52
NEDD1-207ENST00000555114 RPUSD2Q8IZ73 545 aaKnown RBP18.29■□□□□ 0.52
NEDD1-207ENST00000555114 MPHOSPH6Q99547 160 aaKnown RBP18.29■□□□□ 0.52
NEDD1-207ENST00000555114 TOMM22Q9NS69 142 aa18.29■□□□□ 0.52
NEDD1-207ENST00000555114 GRXCR1A8MXD5 290 aa18.28■□□□□ 0.52
NEDD1-207ENST00000555114 PBX2P40425 430 aa18.28■□□□□ 0.52
NEDD1-207ENST00000555114 SNAP25P60880 206 aa18.28■□□□□ 0.52
NEDD1-207ENST00000555114 MUM1L1Q5H9M0 696 aa18.28■□□□□ 0.52
NEDD1-207ENST00000555114 AKNAD1Q5T1N1 836 aa18.28■□□□□ 0.52
NEDD1-207ENST00000555114 IL17RBQ9NRM6 502 aa18.28■□□□□ 0.52
NEDD1-207ENST00000555114 ANAPC4Q9UJX5 808 aa18.28■□□□□ 0.52
NEDD1-207ENST00000555114 ORC4O43929 436 aa18.27■□□□□ 0.52
NEDD1-207ENST00000555114 NMT2O60551 498 aa18.27■□□□□ 0.52
NEDD1-207ENST00000555114 SUPT20HL2P0C7V6 817 aa18.27■□□□□ 0.52
NEDD1-207ENST00000555114 BRDTQ58F21 947 aaPredicted RBP18.27■□□□□ 0.52
NEDD1-207ENST00000555114 TAPT1Q6NXT6 567 aa18.27■□□□□ 0.52
NEDD1-207ENST00000555114 OTUD7AQ8TE49 926 aaPredicted RBP18.27■□□□□ 0.52
NEDD1-207ENST00000555114 MORC4Q8TE76 937 aa18.27■□□□□ 0.52
NEDD1-207ENST00000555114 EVI5LQ96CN4 794 aa18.27■□□□□ 0.52
NEDD1-207ENST00000555114 RANBP17Q9H2T7 1088 aaKnown RBP18.27■□□□□ 0.52
NEDD1-207ENST00000555114 PRDM12Q9H4Q4 367 aa18.27■□□□□ 0.52
NEDD1-207ENST00000555114 SLC28A3Q9HAS3 691 aa18.27■□□□□ 0.52
NEDD1-207ENST00000555114 PRDM6Q9NQX0 595 aa18.27■□□□□ 0.52
NEDD1-207ENST00000555114 PDGFCQ9NRA1 345 aa18.27■□□□□ 0.52
NEDD1-207ENST00000555114 POLR3EQ9NVU0 708 aa18.27■□□□□ 0.52
NEDD1-207ENST00000555114 CPT1AP50416 773 aa18.26■□□□□ 0.51
NEDD1-207ENST00000555114 CCL23P55773 120 aa18.26■□□□□ 0.51
NEDD1-207ENST00000555114 DUSP28Q4G0W2 176 aa18.26■□□□□ 0.51
NEDD1-207ENST00000555114 SYDE2Q5VT97 1194 aa18.26■□□□□ 0.51
NEDD1-207ENST00000555114 USP38Q8NB14 1042 aa18.26■□□□□ 0.51
NEDD1-207ENST00000555114 PPM1EQ8WY54 764 aa18.26■□□□□ 0.51
NEDD1-207ENST00000555114 NOC4LQ9BVI4 516 aaKnown RBP18.26■□□□□ 0.51
NEDD1-207ENST00000555114 GPHNQ9NQX3 736 aaPredicted RBP18.26■□□□□ 0.51
NEDD1-207ENST00000555114 HELLSQ9NRZ9 838 aa18.26■□□□□ 0.51
NEDD1-207ENST00000555114 CDH23Q9H251 3354 aa18.25■□□□□ 0.51
NEDD1-207ENST00000555114 RAD50Q92878 1312 aa18.25■□□□□ 0.51
NEDD1-207ENST00000555114 PTPDC1A2A3K4 754 aa18.25■□□□□ 0.51
NEDD1-207ENST00000555114 B4GALT4O60513 344 aa18.25■□□□□ 0.51
NEDD1-207ENST00000555114 PFKMP08237 780 aa18.25■□□□□ 0.51
NEDD1-207ENST00000555114 TOP1P11387 765 aaKnown RBP18.25■□□□□ 0.51
NEDD1-207ENST00000555114 NOVP48745 357 aa18.25■□□□□ 0.51
NEDD1-207ENST00000555114 ALDH5A1P51649 535 aaPredicted RBP18.25■□□□□ 0.51
NEDD1-207ENST00000555114 BAATQ14032 418 aaPredicted RBP18.25■□□□□ 0.51
NEDD1-207ENST00000555114 ALX1Q15699 326 aa18.25■□□□□ 0.51
NEDD1-207ENST00000555114 RRP12Q5JTH9 1297 aaKnown RBP18.25■□□□□ 0.51
NEDD1-207ENST00000555114 BTNL9Q6UXG8 535 aa18.25■□□□□ 0.51
NEDD1-207ENST00000555114 OTOP2Q7RTS6 562 aa18.25■□□□□ 0.51
NEDD1-207ENST00000555114 ATXN2LQ8WWM7 1075 aaKnown RBP18.25■□□□□ 0.51
NEDD1-207ENST00000555114 TRPV6Q9H1D0 765 aa18.25■□□□□ 0.51
NEDD1-207ENST00000555114 THEGQ9P2T0 379 aa18.25■□□□□ 0.51
NEDD1-207ENST00000555114 PCDHB15Q9Y5E8 787 aa18.25■□□□□ 0.51
NEDD1-207ENST00000555114 SLC4A7Q9Y6M7 1214 aa18.25■□□□□ 0.51
NEDD1-207ENST00000555114 B4DLN1 442 aa18.24■□□□□ 0.51
NEDD1-207ENST00000555114 FOXP2O15409 715 aa18.24■□□□□ 0.51
NEDD1-207ENST00000555114 IGFBP4P22692 258 aa18.24■□□□□ 0.51
NEDD1-207ENST00000555114 MRPL12P52815 198 aaKnown RBP18.24■□□□□ 0.51
NEDD1-207ENST00000555114 PSMC6P62333 389 aa18.24■□□□□ 0.51
NEDD1-207ENST00000555114 TICAM2Q86XR7 235 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms