RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 TIMP1P01033 207 aa18.55■□□□□ 0.56
ARHGEF40-205ENST00000555052 ALAS1P13196 640 aa18.55■□□□□ 0.56
ARHGEF40-205ENST00000555052 SNAP25P60880 206 aa18.55■□□□□ 0.56
ARHGEF40-205ENST00000555052 MUM1L1Q5H9M0 696 aa18.55■□□□□ 0.56
ARHGEF40-205ENST00000555052 CCDC174Q6PII3 467 aa18.55■□□□□ 0.56
ARHGEF40-205ENST00000555052 DCAF4Q8WV16 495 aa18.55■□□□□ 0.56
ARHGEF40-205ENST00000555052 RNPC3Q96LT9 517 aaKnown RBP18.55■□□□□ 0.56
ARHGEF40-205ENST00000555052 CDX2Q99626 313 aaPredicted RBP18.55■□□□□ 0.56
ARHGEF40-205ENST00000555052 CYP39A1Q9NYL5 469 aa18.55■□□□□ 0.56
ARHGEF40-205ENST00000555052 ZBTB47Q9UFB7 747 aaPredicted RBP18.55■□□□□ 0.56
ARHGEF40-205ENST00000555052 GNEQ9Y223 722 aaKnown RBP18.55■□□□□ 0.56
ARHGEF40-205ENST00000555052 A0A0U1RQG5 324 aaPredicted RBP18.54■□□□□ 0.56
ARHGEF40-205ENST00000555052 ASB14A6NK59 587 aa18.54■□□□□ 0.56
ARHGEF40-205ENST00000555052 ARVCFO00192 962 aa18.54■□□□□ 0.56
ARHGEF40-205ENST00000555052 FGAP02671 866 aa18.54■□□□□ 0.56
ARHGEF40-205ENST00000555052 GNASQ5JWF2 1037 aa18.54■□□□□ 0.56
ARHGEF40-205ENST00000555052 BTNL9Q6UXG8 535 aa18.54■□□□□ 0.56
ARHGEF40-205ENST00000555052 BDP1A6H8Y1 2624 aa18.53■□□□□ 0.56
ARHGEF40-205ENST00000555052 ICAM1P05362 532 aa18.53■□□□□ 0.56
ARHGEF40-205ENST00000555052 TNFAIP2Q03169 654 aa18.53■□□□□ 0.56
ARHGEF40-205ENST00000555052 MCMDC2Q4G0Z9 681 aa18.53■□□□□ 0.56
ARHGEF40-205ENST00000555052 ZNF589Q86UQ0 364 aaPredicted RBP18.53■□□□□ 0.56
ARHGEF40-205ENST00000555052 FAM126BQ8IXS8 530 aa18.53■□□□□ 0.56
ARHGEF40-205ENST00000555052 RANBP17Q9H2T7 1088 aaKnown RBP18.53■□□□□ 0.56
ARHGEF40-205ENST00000555052 DDX49Q9Y6V7 483 aaKnown RBP18.53■□□□□ 0.56
ARHGEF40-205ENST00000555052 TMEM265A0A087WTH1 108 aa18.52■□□□□ 0.56
ARHGEF40-205ENST00000555052 HSPD1P10809 573 aaKnown RBP18.52■□□□□ 0.56
ARHGEF40-205ENST00000555052 BEX3Q00994 111 aa18.52■□□□□ 0.56
ARHGEF40-205ENST00000555052 CCDC96Q2M329 555 aa18.52■□□□□ 0.56
ARHGEF40-205ENST00000555052 TTBK2Q6IQ55 1244 aa18.52■□□□□ 0.56
ARHGEF40-205ENST00000555052 MFSD5Q6N075 450 aa18.52■□□□□ 0.56
ARHGEF40-205ENST00000555052 SLC43A3Q8NBI5 491 aa18.52■□□□□ 0.56
ARHGEF40-205ENST00000555052 MORC4Q8TE76 937 aa18.52■□□□□ 0.56
ARHGEF40-205ENST00000555052 TCP11L1Q9NUJ3 509 aa18.52■□□□□ 0.56
ARHGEF40-205ENST00000555052 CCPG1Q9ULG6 757 aa18.52■□□□□ 0.56
ARHGEF40-205ENST00000555052 REV3LO60673 3130 aa18.51■□□□□ 0.55
ARHGEF40-205ENST00000555052 TOP1P11387 765 aaKnown RBP18.51■□□□□ 0.55
ARHGEF40-205ENST00000555052 SMPD1P17405 629 aa18.51■□□□□ 0.55
ARHGEF40-205ENST00000555052 PTGS1P23219 599 aa18.51■□□□□ 0.55
ARHGEF40-205ENST00000555052 NMIQ13287 307 aaPredicted RBP18.51■□□□□ 0.55
ARHGEF40-205ENST00000555052 TAPT1Q6NXT6 567 aa18.51■□□□□ 0.55
ARHGEF40-205ENST00000555052 TLK2Q86UE8 772 aa18.51■□□□□ 0.55
ARHGEF40-205ENST00000555052 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.51■□□□□ 0.55
ARHGEF40-205ENST00000555052 TMEM47Q9BQJ4 181 aa18.51■□□□□ 0.55
ARHGEF40-205ENST00000555052 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.51■□□□□ 0.552e-7■□□□□ 9.5
ARHGEF40-205ENST00000555052 PDGFCQ9NRA1 345 aa18.51■□□□□ 0.55
ARHGEF40-205ENST00000555052 MTMR7Q9Y216 660 aa18.51■□□□□ 0.55
ARHGEF40-205ENST00000555052 CD4P01730 458 aa18.5■□□□□ 0.55
ARHGEF40-205ENST00000555052 SLC16A2P36021 539 aa18.5■□□□□ 0.55
ARHGEF40-205ENST00000555052 FSCN1Q16658 493 aaKnown RBP18.5■□□□□ 0.55
ARHGEF40-205ENST00000555052 RASIP1Q5U651 963 aa18.5■□□□□ 0.55
ARHGEF40-205ENST00000555052 SYDE2Q5VT97 1194 aa18.5■□□□□ 0.55
ARHGEF40-205ENST00000555052 NSMFQ6X4W1 530 aa18.5■□□□□ 0.55
ARHGEF40-205ENST00000555052 C16orf59Q7L2K0 433 aa18.5■□□□□ 0.55
ARHGEF40-205ENST00000555052 FBXO16Q8IX29 292 aaPredicted RBP18.5■□□□□ 0.55
ARHGEF40-205ENST00000555052 VTI1AQ96AJ9 217 aa18.5■□□□□ 0.55
ARHGEF40-205ENST00000555052 PURBQ96QR8 312 aaKnown RBP18.5■□□□□ 0.55
ARHGEF40-205ENST00000555052 VTA1Q9NP79 307 aa18.5■□□□□ 0.55
ARHGEF40-205ENST00000555052 TOMM22Q9NS69 142 aa18.5■□□□□ 0.55
ARHGEF40-205ENST00000555052 CCDC171Q6TFL3 1326 aa18.49■□□□□ 0.55
ARHGEF40-205ENST00000555052 CABYRO75952 493 aa18.49■□□□□ 0.55
ARHGEF40-205ENST00000555052 PPIGQ13427 754 aaKnown RBP eCLIP18.49■□□□□ 0.552e-8■□□□□ 10.1
ARHGEF40-205ENST00000555052 RRP12Q5JTH9 1297 aaKnown RBP18.49■□□□□ 0.55
ARHGEF40-205ENST00000555052 TMEM240Q5SV17 173 aa18.49■□□□□ 0.55
ARHGEF40-205ENST00000555052 TMEM63BQ5T3F8 832 aa18.49■□□□□ 0.55
ARHGEF40-205ENST00000555052 CXCL17Q6UXB2 119 aa18.49■□□□□ 0.55
ARHGEF40-205ENST00000555052 NOL8Q76FK4 1167 aaKnown RBP18.49■□□□□ 0.55
ARHGEF40-205ENST00000555052 SMC5Q8IY18 1101 aa18.49■□□□□ 0.55
ARHGEF40-205ENST00000555052 MYLIPQ8WY64 445 aa18.49■□□□□ 0.55
ARHGEF40-205ENST00000555052 LNPKQ9C0E8 428 aa18.49■□□□□ 0.55
ARHGEF40-205ENST00000555052 GRIN2DO15399 1336 aa18.49■□□□□ 0.55
ARHGEF40-205ENST00000555052 NFIBO00712 420 aa18.48■□□□□ 0.55
ARHGEF40-205ENST00000555052 SNHG28P0DPA3 235 aa18.48■□□□□ 0.55
ARHGEF40-205ENST00000555052 PDHBP11177 359 aa18.48■□□□□ 0.55
ARHGEF40-205ENST00000555052 PCP11498 1178 aaKnown RBP18.48■□□□□ 0.55
ARHGEF40-205ENST00000555052 DNAJB2P25686 324 aa18.48■□□□□ 0.55
ARHGEF40-205ENST00000555052 HAND2P61296 217 aa18.48■□□□□ 0.55
ARHGEF40-205ENST00000555052 BAATQ14032 418 aaPredicted RBP18.48■□□□□ 0.55
ARHGEF40-205ENST00000555052 IQSEC1Q6DN90 963 aa18.48■□□□□ 0.55
ARHGEF40-205ENST00000555052 EEPD1Q7L9B9 569 aa18.48■□□□□ 0.55
ARHGEF40-205ENST00000555052 TBC1D10CQ8IV04 446 aa18.48■□□□□ 0.55
ARHGEF40-205ENST00000555052 MAFAQ8NHW3 353 aaPredicted RBP18.48■□□□□ 0.55
ARHGEF40-205ENST00000555052 Q9Y3F1 56 aa18.48■□□□□ 0.55
ARHGEF40-205ENST00000555052 FRMPD2Q68DX3 1309 aaPredicted RBP18.48■□□□□ 0.55
ARHGEF40-205ENST00000555052 LOC102724159A0A0B4J2E5 919 aa18.47■□□□□ 0.55
ARHGEF40-205ENST00000555052 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.47■□□□□ 0.55
ARHGEF40-205ENST00000555052 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.47■□□□□ 0.55
ARHGEF40-205ENST00000555052 TLR3O15455 904 aaKnown RBP18.47■□□□□ 0.55
ARHGEF40-205ENST00000555052 DYNC1LI2O43237 492 aaPredicted RBP18.47■□□□□ 0.55
ARHGEF40-205ENST00000555052 CSF2RAP15509 400 aa18.47■□□□□ 0.55
ARHGEF40-205ENST00000555052 ZNF543Q08ER8 600 aa18.47■□□□□ 0.55
ARHGEF40-205ENST00000555052 AAMPQ13685 434 aa18.47■□□□□ 0.55
ARHGEF40-205ENST00000555052 PWP2Q15269 919 aaKnown RBP18.47■□□□□ 0.55
ARHGEF40-205ENST00000555052 AKNAD1Q5T1N1 836 aa18.47■□□□□ 0.55
ARHGEF40-205ENST00000555052 CLEC4DQ8WXI8 215 aa18.47■□□□□ 0.55
ARHGEF40-205ENST00000555052 COL25A1Q9BXS0 654 aaPredicted RBP18.47■□□□□ 0.55
ARHGEF40-205ENST00000555052 PPP1R12CQ9BZL4 782 aa18.47■□□□□ 0.55
ARHGEF40-205ENST00000555052 AP5M1Q9H0R1 490 aa18.47■□□□□ 0.55
ARHGEF40-205ENST00000555052 GPCPD1Q9NPB8 672 aa18.47■□□□□ 0.55
ARHGEF40-205ENST00000555052 LAMA4Q16363 1823 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms