RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994	FAM109B	Q6ICB4	259 aa	Predicted RBP	5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	ANKRD18A	Q8IVF6	992 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	SP8	Q8IXZ3	490 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	TRMT2A	Q8IZ69	625 aa	Known RBP	5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	TMEM130	Q8N3G9	435 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	OGFOD1	Q8N543	542 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	IL22RA1	Q8N6P7	574 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	LINS1	Q8NG48	757 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	TTC9	Q92623	222 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	CLUAP1	Q96AJ1	413 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	IFT43	Q96FT9	208 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	PAWR	Q96IZ0	340 aa	Known RBP	5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	NECAB3	Q96P71	396 aa	Predicted RBP	5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	C2orf49	Q9BVC5	232 aa	Predicted RBP	5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	KRTAP4-2	Q9BYR5	136 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	ALG2	Q9H553	416 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	MYOZ2	Q9NPC6	264 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	ZNF646	O15015	1829 aa	Predicted RBP	5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	SCN9A	Q15858	1988 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	LGR5	O75473	907 aa		5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	SASH1	O94885	1247 aa		5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	MAP3K6	O95382	1288 aa		5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	TFRC	P02786	760 aa	Known RBP	5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	ZBTB48	P10074	688 aa	Predicted RBP	5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	RASA1	P20936	1047 aa		5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	GRK4	P32298	578 aa		5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	MRE11	P49959	708 aa		5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	IDH3A	P50213	366 aa		5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	RARS	P54136	660 aa	Known RBP	5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	GPLD1	P80108	840 aa		5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	GRAP	Q13588	217 aa		5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	BEND3	Q5T5X7	828 aa		5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	IER5	Q5VY09	327 aa		5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	GRAPL	Q8TC17	118 aa	Predicted RBP	5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	RAET1E	Q8TD07	263 aa		5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	CELF1	Q92879	486 aa	Known RBP	5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	PLD4	Q96BZ4	506 aa		5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	UHRF1	Q96T88	793 aa	Predicted RBP	5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	MPHOSPH8	Q99549	860 aa		5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	P2RX7	Q99572	595 aa	Known RBP	5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	LRFN3	Q9BTN0	628 aa		5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	API5	Q9BZZ5	524 aa	Known RBP	5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	BCL11A	Q9H165	835 aa		5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	RIPOR2	Q9Y4F9	1068 aa		5.81	□□□□□ -1.48
ATXN3-231	ENST00000554994	CACNA1G	O43497	2377 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	PTPRC	P08575	1304 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	ZBED9	Q6R2W3	1325 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	ANKRD18B	A2A2Z9	1011 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	USP17L3	A6NCW0	530 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	USP17L4	A6NCW7	530 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994		J3QW42	95 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	GRM8	O00222	908 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	DHX15	O43143	795 aa	Known RBP	5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	ALDH1L1	O75891	902 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	SGPL1	O95470	568 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	VIL1	P09327	827 aa	Known RBP	5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	CT47B1	P0C2W7	299 aa	Predicted RBP	5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	CTGF	P29279	349 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	IGHMBP2	P38935	993 aa	Known RBP	5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	KCNJ4	P48050	445 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	CTSW	P56202	376 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	LACTB	P83111	547 aa	Predicted RBP	5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	IFIT5	Q13325	482 aa	Known RBP	5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	KIF22	Q14807	665 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	SF3B3	Q15393	1217 aa	Known RBP	5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	RTN1	Q16799	776 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	CCDC57	Q2TAC2	916 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	USP17L2	Q6R6M4	530 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	LMBR1L	Q6UX01	489 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	USP17L1	Q7RTZ2	530 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	ZDHHC13	Q8IUH4	622 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	TTLL11	Q8NHH1	800 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	BRI3BP	Q8WY22	251 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	PPM1E	Q8WY54	764 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	DEFB118	Q96PH6	123 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	UBL7	Q96S82	380 aa	Predicted RBP	5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	CDC5L	Q99459	802 aa	Known RBP	5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	C1QTNF1	Q9BXJ1	281 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	GREM2	Q9H772	168 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	ZFYVE28	Q9HCC9	887 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	CNNM1	Q9NRU3	951 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	KLK14	Q9P0G3	267 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	POLL	Q9UGP5	575 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	NCOR1	O75376	2440 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	SSC5D	A1L4H1	1573 aa		5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	IBTK	Q9P2D0	1353 aa	Predicted RBP	5.8	□□□□□ -1.48
ATXN3-231	ENST00000554994	BDP1	A6H8Y1	2624 aa		5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	CCL15-CCL14	A0A0B4J2E2	113 aa		5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	PALM3	A6NDB9	673 aa	Predicted RBP	5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	FAM86C2P	A6NEL3	165 aa		5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994		M0R2N6	131 aa		5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	WNT11	O96014	354 aa		5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	NBPF7	P0C2Y1	421 aa	Predicted RBP	5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	SPINK2	P20155	84 aa		5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	ARID4A	P29374	1257 aa	Predicted RBP	5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	CCT4	P50991	539 aa	Known RBP	5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	UBXN2A	P68543	259 aa		5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	GPSM2	P81274	684 aa		5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	NFIA	Q12857	509 aa		5.79	□□□□□ -1.48
ATXN3-231	ENST00000554994	CCL15	Q16663	113 aa		5.79	□□□□□ -1.48

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