RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 CACNA2D2Q9NY47 1150 aa7.91□□□□□ -1.14
SCFD1-212ENST00000554486 TFCP2L1Q9NZI6 479 aa7.91□□□□□ -1.14
SCFD1-212ENST00000554486 NARFQ9UHQ1 456 aa7.91□□□□□ -1.14
SCFD1-212ENST00000554486 PNPLA7Q6ZV29 1317 aa7.91□□□□□ -1.14
SCFD1-212ENST00000554486 USP42Q9H9J4 1324 aaKnown RBP7.91□□□□□ -1.14
SCFD1-212ENST00000554486 ATP10DQ9P241 1426 aa7.91□□□□□ -1.14
SCFD1-212ENST00000554486 LOC100996750A0A140TA64 210 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 LOC100289279A0A1B0GTE1 492 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 TCF3P15923 654 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 MAOBP27338 520 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 ARNTP27540 789 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 LIG3P49916 1009 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 CCT4P50991 539 aaKnown RBP7.9□□□□□ -1.14
SCFD1-212ENST00000554486 PPP2R3AQ06190 1150 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 RAD51AP2Q09MP3 1159 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 TCIRG1Q13488 830 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 MVPQ14764 893 aaKnown RBP7.9□□□□□ -1.14
SCFD1-212ENST00000554486 MAP3K11Q16584 847 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 PRSS36Q5K4E3 855 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 PCNX4Q63HM2 1172 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 KIAA1211Q6ZU35 1233 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 COL23A1Q86Y22 540 aaPredicted RBP7.9□□□□□ -1.14
SCFD1-212ENST00000554486 AGGF1Q8N302 714 aaeCLIP7.9□□□□□ -1.14
SCFD1-212ENST00000554486 LINS1Q8NG48 757 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 MYD88Q99836 296 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 ISCA1Q9BUE6 129 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 RSRP1Q9BUV0 290 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 KRTAP4-6Q9BYQ5 205 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 BCL11AQ9H165 835 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 STK32BQ9NY57 414 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 TLR6Q9Y2C9 796 aa7.9□□□□□ -1.14
SCFD1-212ENST00000554486 ALDH1L1O75891 902 aa7.89□□□□□ -1.15
SCFD1-212ENST00000554486 GYS1P13807 737 aa7.89□□□□□ -1.15
SCFD1-212ENST00000554486 RFC4P35249 363 aa7.89□□□□□ -1.15
SCFD1-212ENST00000554486 CWF19L2Q2TBE0 894 aaKnown RBP7.89□□□□□ -1.15
SCFD1-212ENST00000554486 ZMYM1Q5SVZ6 1142 aa7.89□□□□□ -1.15
SCFD1-212ENST00000554486 TTBK2Q6IQ55 1244 aa7.89□□□□□ -1.15
SCFD1-212ENST00000554486 CLEC4GQ6UXB4 293 aa7.89□□□□□ -1.15
SCFD1-212ENST00000554486 PRR23CQ6ZRP0 262 aa7.89□□□□□ -1.15
SCFD1-212ENST00000554486 Q6ZS46 218 aa7.89□□□□□ -1.15
SCFD1-212ENST00000554486 SLC51AQ86UW1 340 aa7.89□□□□□ -1.15
SCFD1-212ENST00000554486 ITPRIPQ8IWB1 547 aa7.89□□□□□ -1.15
SCFD1-212ENST00000554486 ZNF34Q8IZ26 560 aa7.89□□□□□ -1.15
SCFD1-212ENST00000554486 PHC3Q8NDX5 983 aa7.89□□□□□ -1.15
SCFD1-212ENST00000554486 EXOC6Q8TAG9 804 aa7.89□□□□□ -1.15
SCFD1-212ENST00000554486 RNF34Q969K3 372 aa7.89□□□□□ -1.15
SCFD1-212ENST00000554486 KBTBD4Q9NVX7 518 aa7.89□□□□□ -1.15
SCFD1-212ENST00000554486 IBTKQ9P2D0 1353 aaPredicted RBP7.88□□□□□ -1.15
SCFD1-212ENST00000554486 UBN2Q6ZU65 1347 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 GSTP1P09211 210 aaKnown RBP7.88□□□□□ -1.15
SCFD1-212ENST00000554486 TFE3P19532 575 aaPredicted RBP7.88□□□□□ -1.15
SCFD1-212ENST00000554486 GPTP24298 496 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 ITGB7P26010 798 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 RACK1P63244 317 aaKnown RBP7.88□□□□□ -1.15
SCFD1-212ENST00000554486 PTPN11Q06124 597 aaPredicted RBP7.88□□□□□ -1.15
SCFD1-212ENST00000554486 NEXNQ0ZGT2 675 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 AP3B2Q13367 1082 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 GCKRQ14397 625 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 POU4F3Q15319 338 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 ZNF394Q53GI3 561 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 HSP90AB3PQ58FF7 597 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 TBC1D9BQ66K14 1250 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 AGMOQ6ZNB7 445 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 NLRP10Q86W26 655 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 CCDC191Q8NCU4 936 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 FLAD1Q8NFF5 587 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 WDR89Q96FK6 387 aaPredicted RBP7.88□□□□□ -1.15
SCFD1-212ENST00000554486 RHOVQ96L33 236 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 MEIS3Q99687 375 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 PDGFDQ9GZP0 370 aaPredicted RBP7.88□□□□□ -1.15
SCFD1-212ENST00000554486 USP44Q9H0E7 712 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 CCDC86Q9H6F5 360 aaKnown RBP7.88□□□□□ -1.15
SCFD1-212ENST00000554486 GGT7Q9UJ14 662 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 PCDHB5Q9Y5E4 795 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 COL24A1Q17RW2 1714 aa7.88□□□□□ -1.15
SCFD1-212ENST00000554486 SART1O43290 800 aaKnown RBP7.87□□□□□ -1.15
SCFD1-212ENST00000554486 ZNF862O60290 1169 aa7.87□□□□□ -1.15
SCFD1-212ENST00000554486 CYP11A1P05108 521 aa7.87□□□□□ -1.15
SCFD1-212ENST00000554486 GARTP22102 1010 aa7.87□□□□□ -1.15
SCFD1-212ENST00000554486 UVSSAQ2YD98 709 aa7.87□□□□□ -1.15
SCFD1-212ENST00000554486 HS2ST1Q7LGA3 356 aa7.87□□□□□ -1.15
SCFD1-212ENST00000554486 NT5DC4Q86YG4 428 aa7.87□□□□□ -1.15
SCFD1-212ENST00000554486 USP26Q9BXU7 913 aa7.87□□□□□ -1.15
SCFD1-212ENST00000554486 ZC3H12CQ9C0D7 883 aaKnown RBP7.87□□□□□ -1.15
SCFD1-212ENST00000554486 RNF208Q9H0X6 261 aa7.87□□□□□ -1.15
SCFD1-212ENST00000554486 ZBTB40Q9NUA8 1239 aa7.87□□□□□ -1.15
SCFD1-212ENST00000554486 CWC25Q9NXE8 425 aaPredicted RBP7.87□□□□□ -1.15
SCFD1-212ENST00000554486 DDX19BQ9UMR2 479 aa7.87□□□□□ -1.15
SCFD1-212ENST00000554486 NIP7Q9Y221 180 aaKnown RBP eCLIP7.87□□□□□ -1.15
SCFD1-212ENST00000554486 ZNF652Q9Y2D9 606 aa7.87□□□□□ -1.15
SCFD1-212ENST00000554486 CASZ1Q86V15 1759 aa7.87□□□□□ -1.15
SCFD1-212ENST00000554486 UTYO14607 1347 aa7.86□□□□□ -1.15
SCFD1-212ENST00000554486 GRM8O00222 908 aa7.86□□□□□ -1.15
SCFD1-212ENST00000554486 DHX15O43143 795 aaKnown RBP7.86□□□□□ -1.15
SCFD1-212ENST00000554486 NBPF7P0C2Y1 421 aaPredicted RBP7.86□□□□□ -1.15
SCFD1-212ENST00000554486 TM4SF1P30408 202 aa7.86□□□□□ -1.15
SCFD1-212ENST00000554486 CASP7P55210 303 aa7.86□□□□□ -1.15
SCFD1-212ENST00000554486 RPS26P62854 115 aaKnown RBP7.86□□□□□ -1.15
SCFD1-212ENST00000554486 NFIXQ14938 502 aa7.86□□□□□ -1.15
SCFD1-212ENST00000554486 PARP10Q53GL7 1025 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms