RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 NBPF7P0C2Y1 421 aaPredicted RBP3.15□□□□□ -1.9
PRPF39-206ENST00000554429 SKILP12757 684 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 FOSL1P15407 271 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 ABCD1P33897 745 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 GJA5P36382 358 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 ANP32AP39687 249 aaKnown RBP3.15□□□□□ -1.9
PRPF39-206ENST00000554429 IREB2P48200 963 aaKnown RBP3.15□□□□□ -1.9
PRPF39-206ENST00000554429 CD151P48509 253 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 GTF2A2P52657 109 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 RBM5P52756 815 aaKnown RBP eCLIP3.15□□□□□ -1.9
PRPF39-206ENST00000554429 GEMIN4P57678 1058 aaKnown RBP3.15□□□□□ -1.9
PRPF39-206ENST00000554429 FOXO4P98177 505 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 MAP3K10Q02779 954 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 AIMP1Q12904 312 aaKnown RBP3.15□□□□□ -1.9
PRPF39-206ENST00000554429 TNFAIP1Q13829 316 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 GCKRQ14397 625 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 KRT24Q2M2I5 525 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 DLK2Q6UY11 383 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 TAS1R3Q7RTX0 852 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 KRT77Q7Z794 578 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 FAM83AQ86UY5 434 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 LINS1Q8NG48 757 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 TDRD7Q8NHU6 1098 aaKnown RBP3.15□□□□□ -1.9
PRPF39-206ENST00000554429 TBC1D31Q96DN5 1066 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 HOOK2Q96ED9 719 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 NELL2Q99435 816 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 MYD88Q99836 296 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 GREM2Q9H772 168 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 PHAXQ9H814 394 aaKnown RBP3.15□□□□□ -1.9
PRPF39-206ENST00000554429 CD209Q9NNX6 404 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 MKS1Q9NXB0 559 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 RABL2AQ9UBK7 228 aaPredicted RBP3.15□□□□□ -1.9
PRPF39-206ENST00000554429 TAGLN3Q9UI15 199 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 ZNF112Q9UJU3 913 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 PDS5AQ29RF7 1337 aaKnown RBP3.15□□□□□ -1.91
PRPF39-206ENST00000554429 CDK5RAP2Q96SN8 1893 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 ATP5J2-PTCD1G3V325 749 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 BOLA2-SMG1P6H3BVE0 249 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 ALDH1L1O75891 902 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 INMTO95050 263 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 OAS2P29728 719 aaKnown RBP3.15□□□□□ -1.91
PRPF39-206ENST00000554429 IGHMBP2P38935 993 aaKnown RBP3.15□□□□□ -1.91
PRPF39-206ENST00000554429 CDKN1CP49918 316 aaPredicted RBP3.15□□□□□ -1.91
PRPF39-206ENST00000554429 RBL2Q08999 1139 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 MRPL58Q14197 206 aaKnown RBP3.15□□□□□ -1.91
PRPF39-206ENST00000554429 TTLL5Q6EMB2 1281 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 ZNF804AQ7Z570 1209 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 LCA5Q86VQ0 697 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 STK11IPQ8N1F8 1099 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 CERS5Q8N5B7 392 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.15□□□□□ -1.916e-6■■■■■ 27.5
PRPF39-206ENST00000554429 CENPTQ96BT3 561 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 TBC1D20Q96BZ9 403 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 CDHR1Q96JP9 859 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 RNPC3Q96LT9 517 aaKnown RBP3.15□□□□□ -1.91
PRPF39-206ENST00000554429 FAM210AQ96ND0 272 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 SPSB2Q99619 263 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 DEFB129Q9H1M3 183 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 R3HDMLQ9H3Y0 253 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 KCNH4Q9UQ05 1017 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 MAP3K2Q9Y2U5 619 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 CEP83Q9Y592 693 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 PCDHGB7Q9Y5F8 929 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 DDX60LQ5H9U9 1706 aaKnown RBP3.15□□□□□ -1.91
PRPF39-206ENST00000554429 PDE4DIPQ5VU43 2346 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 A6NCN8 305 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 MAP3K7O43318 606 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 FIBPO43427 364 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 PPP1R12BO60237 982 aaPredicted RBP3.15□□□□□ -1.91
PRPF39-206ENST00000554429 SASH1O94885 1247 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 IL4RP24394 825 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 PIK3CAP42336 1068 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 ZNF132P52740 706 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 SP3Q02447 781 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 PPIL2Q13356 520 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 ZNF211Q13398 564 aaPredicted RBP3.15□□□□□ -1.91
PRPF39-206ENST00000554429 TAF11Q15544 211 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 GRAMD1BQ3KR37 738 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 RABL6Q3YEC7 729 aaPredicted RBP3.15□□□□□ -1.91
PRPF39-206ENST00000554429 WDR63Q8IWG1 891 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 C8orf58Q8NAV2 365 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 NLRP7Q8WX94 980 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 SNX21Q969T3 373 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 SLC10A4Q96EP9 437 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 MPP4Q96JB8 637 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 PTPN18Q99952 460 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 SLX1AQ9BQ83 275 aa3.15□□□□□ -1.91
PRPF39-206ENST00000554429 XPO4Q9C0E2 1151 aaKnown RBP3.15□□□□□ -1.91
PRPF39-206ENST00000554429 SALL1Q9NSC2 1324 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 TMEM238LA0A1B0GVL6 79 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 MYO1BO43795 1136 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 LILRB3O75022 631 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 ABL1P00519 1130 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 TPM2P07951 284 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 COL6A1P12109 1028 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 ITGA6P23229 1130 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 MAPK1P28482 360 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 BMP8BP34820 402 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 SEC13P55735 322 aa3.14□□□□□ -1.91
PRPF39-206ENST00000554429 CHRNDQ07001 517 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms