RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 ASB14A6NK59 587 aa16.57■□□□□ 0.24
NEDD1-206ENST00000554226 B4GALT4O60513 344 aa16.57■□□□□ 0.24
NEDD1-206ENST00000554226 RAB11FIP3O75154 756 aa16.57■□□□□ 0.24
NEDD1-206ENST00000554226 CCL23P55773 120 aa16.57■□□□□ 0.24
NEDD1-206ENST00000554226 ZSCAN25Q6NSZ9 544 aa16.57■□□□□ 0.24
NEDD1-206ENST00000554226 KIFC2Q96AC6 838 aa16.57■□□□□ 0.24
NEDD1-206ENST00000554226 PUS7LQ9H0K6 701 aaKnown RBP16.57■□□□□ 0.24
NEDD1-206ENST00000554226 BOLA2Q9H3K6 86 aa16.57■□□□□ 0.24
NEDD1-206ENST00000554226 ACAD9Q9H845 621 aa16.57■□□□□ 0.24
NEDD1-206ENST00000554226 C11orf16Q9NQ32 467 aa16.57■□□□□ 0.24
NEDD1-206ENST00000554226 A1CFQ9NQ94 594 aaKnown RBP16.57■□□□□ 0.24
NEDD1-206ENST00000554226 COG5Q9UP83 839 aa16.57■□□□□ 0.24
NEDD1-206ENST00000554226 BRWD1Q9NSI6 2320 aa16.56■□□□□ 0.24
NEDD1-206ENST00000554226 TLL1O43897 1013 aa16.56■□□□□ 0.24
NEDD1-206ENST00000554226 ZEB2O60315 1214 aa16.56■□□□□ 0.24
NEDD1-206ENST00000554226 GPR37L1O60883 481 aa16.56■□□□□ 0.24
NEDD1-206ENST00000554226 CHGBP05060 677 aa16.56■□□□□ 0.24
NEDD1-206ENST00000554226 ATP2A2P16615 1042 aaKnown RBP16.56■□□□□ 0.24
NEDD1-206ENST00000554226 CNTN2Q02246 1040 aa16.56■□□□□ 0.24
NEDD1-206ENST00000554226 STRBPQ96SI9 672 aaKnown RBP16.56■□□□□ 0.24
NEDD1-206ENST00000554226 TRPV6Q9H1D0 765 aa16.56■□□□□ 0.24
NEDD1-206ENST00000554226 MTMR4Q9NYA4 1195 aa16.56■□□□□ 0.24
NEDD1-206ENST00000554226 CTDP1Q9Y5B0 961 aaPredicted RBP16.56■□□□□ 0.24
NEDD1-206ENST00000554226 SCN10AQ9Y5Y9 1956 aa16.56■□□□□ 0.24
NEDD1-206ENST00000554226 SCN5AQ14524 2016 aa16.55■□□□□ 0.24
NEDD1-206ENST00000554226 MUC6Q6W4X9 2439 aa16.55■□□□□ 0.24
NEDD1-206ENST00000554226 ZNF536O15090 1300 aa16.55■□□□□ 0.24
NEDD1-206ENST00000554226 SOWAHBA6NEL2 793 aa16.55■□□□□ 0.24
NEDD1-206ENST00000554226 GSG1L2A8MUP6 293 aa16.55■□□□□ 0.24
NEDD1-206ENST00000554226 GTPBP6O43824 516 aaPredicted RBP16.55■□□□□ 0.24
NEDD1-206ENST00000554226 HMMRO75330 724 aa16.55■□□□□ 0.24
NEDD1-206ENST00000554226 SMPD1P17405 629 aa16.55■□□□□ 0.24
NEDD1-206ENST00000554226 TKFCQ3LXA3 575 aa16.55■□□□□ 0.24
NEDD1-206ENST00000554226 IQSEC1Q6DN90 963 aa16.55■□□□□ 0.24
NEDD1-206ENST00000554226 MORC4Q8TE76 937 aa16.55■□□□□ 0.24
NEDD1-206ENST00000554226 KHSRPQ92945 711 aaKnown RBP eCLIP16.55■□□□□ 0.24
NEDD1-206ENST00000554226 AP5M1Q9H0R1 490 aa16.55■□□□□ 0.24
NEDD1-206ENST00000554226 ALDH8A1Q9H2A2 487 aaPredicted RBP16.55■□□□□ 0.24
NEDD1-206ENST00000554226 MKNK2Q9HBH9 465 aa16.55■□□□□ 0.24
NEDD1-206ENST00000554226 CLIP2Q9UDT6 1046 aa16.55■□□□□ 0.24
NEDD1-206ENST00000554226 ZBBXA8MT70 800 aa16.54■□□□□ 0.24
NEDD1-206ENST00000554226 RFXAPO00287 272 aa16.54■□□□□ 0.24
NEDD1-206ENST00000554226 CA3P07451 260 aa16.54■□□□□ 0.24
NEDD1-206ENST00000554226 TMEM67Q5HYA8 995 aa16.54■□□□□ 0.24
NEDD1-206ENST00000554226 TAPT1Q6NXT6 567 aa16.54■□□□□ 0.24
NEDD1-206ENST00000554226 SIRT2Q8IXJ6 389 aa16.54■□□□□ 0.24
NEDD1-206ENST00000554226 PHOSPHO2Q8TCD6 241 aa16.54■□□□□ 0.24
NEDD1-206ENST00000554226 CEP95Q96GE4 821 aa16.54■□□□□ 0.24
NEDD1-206ENST00000554226 ZNF287Q9HBT7 754 aa16.54■□□□□ 0.24
NEDD1-206ENST00000554226 EPOPA6NHQ4 379 aa16.53■□□□□ 0.24
NEDD1-206ENST00000554226 PLA2G6O60733 806 aa16.53■□□□□ 0.24
NEDD1-206ENST00000554226 TTLL1O95922 423 aa16.53■□□□□ 0.24
NEDD1-206ENST00000554226 SUPT20HL2P0C7V6 817 aa16.53■□□□□ 0.24
NEDD1-206ENST00000554226 BMP3P12645 472 aa16.53■□□□□ 0.24
NEDD1-206ENST00000554226 SLC4A3P48751 1232 aa16.53■□□□□ 0.24
NEDD1-206ENST00000554226 SCLYQ96I15 445 aa16.53■□□□□ 0.24
NEDD1-206ENST00000554226 GMCL1Q96IK5 515 aa16.53■□□□□ 0.24
NEDD1-206ENST00000554226 SLC9A7Q96T83 725 aa16.53■□□□□ 0.24
NEDD1-206ENST00000554226 RNF146Q9NTX7 359 aa16.53■□□□□ 0.24
NEDD1-206ENST00000554226 LOC102724159A0A0B4J2E5 919 aa16.52■□□□□ 0.24
NEDD1-206ENST00000554226 DYNC1LI2O43237 492 aaPredicted RBP16.52■□□□□ 0.24
NEDD1-206ENST00000554226 RFC2P35250 354 aa16.52■□□□□ 0.24
NEDD1-206ENST00000554226 STAT2P52630 851 aa16.52■□□□□ 0.24
NEDD1-206ENST00000554226 TTLL4Q14679 1199 aa16.52■□□□□ 0.24
NEDD1-206ENST00000554226 PWP2Q15269 919 aaKnown RBP16.52■□□□□ 0.24
NEDD1-206ENST00000554226 KRT40Q6A162 431 aa16.52■□□□□ 0.24
NEDD1-206ENST00000554226 NOL8Q76FK4 1167 aaKnown RBP16.52■□□□□ 0.24
NEDD1-206ENST00000554226 FAM160B2Q86V87 743 aa16.52■□□□□ 0.24
NEDD1-206ENST00000554226 HLA-CQ95604 372 aa16.52■□□□□ 0.24
NEDD1-206ENST00000554226 VTA1Q9NP79 307 aa16.52■□□□□ 0.24
NEDD1-206ENST00000554226 HOMER2Q9NSB8 354 aa16.52■□□□□ 0.24
NEDD1-206ENST00000554226 COG6Q9Y2V7 657 aa16.52■□□□□ 0.24
NEDD1-206ENST00000554226 PTPRSQ13332 1948 aa16.52■□□□□ 0.23
NEDD1-206ENST00000554226 COL4A4P53420 1690 aaPredicted RBP16.52■□□□□ 0.23
NEDD1-206ENST00000554226 FAM86C2PA6NEL3 165 aa16.51■□□□□ 0.23
NEDD1-206ENST00000554226 PITPNM1O00562 1244 aa16.51■□□□□ 0.23
NEDD1-206ENST00000554226 PSMC6P62333 389 aa16.51■□□□□ 0.23
NEDD1-206ENST00000554226 DUSP28Q4G0W2 176 aa16.51■□□□□ 0.23
NEDD1-206ENST00000554226 SLFN13Q68D06 897 aa16.51■□□□□ 0.23
NEDD1-206ENST00000554226 NEDD1Q8NHV4 660 aa16.51■□□□□ 0.23
NEDD1-206ENST00000554226 CHURC1Q8WUH1 139 aa16.51■□□□□ 0.23
NEDD1-206ENST00000554226 CERS4Q9HA82 394 aa16.51■□□□□ 0.23
NEDD1-206ENST00000554226 EPB41L4AQ9HCS5 686 aaPredicted RBP16.51■□□□□ 0.23
NEDD1-206ENST00000554226 PDGFCQ9NRA1 345 aa16.51■□□□□ 0.23
NEDD1-206ENST00000554226 CYP39A1Q9NYL5 469 aa16.51■□□□□ 0.23
NEDD1-206ENST00000554226 TNKSO95271 1327 aa16.5■□□□□ 0.23
NEDD1-206ENST00000554226 PI4K2BG5E9Z4 385 aa16.5■□□□□ 0.23
NEDD1-206ENST00000554226 ACTN1P12814 892 aa16.5■□□□□ 0.23
NEDD1-206ENST00000554226 GNAT2P19087 354 aa16.5■□□□□ 0.23
NEDD1-206ENST00000554226 PURAQ00577 322 aaKnown RBP16.5■□□□□ 0.23
NEDD1-206ENST00000554226 TAP1Q03518 808 aa16.5■□□□□ 0.23
NEDD1-206ENST00000554226 ALYREFQ86V81 257 aaKnown RBP16.5■□□□□ 0.23
NEDD1-206ENST00000554226 ZNF444Q8N0Y2 327 aaPredicted RBP16.5■□□□□ 0.23
NEDD1-206ENST00000554226 LRRC47Q8N1G4 583 aaKnown RBP16.5■□□□□ 0.23
NEDD1-206ENST00000554226 TET1Q8NFU7 2136 aa16.5■□□□□ 0.23
NEDD1-206ENST00000554226 PANK1Q8TE04 598 aa16.5■□□□□ 0.23
NEDD1-206ENST00000554226 STAG1Q8WVM7 1258 aa16.5■□□□□ 0.23
NEDD1-206ENST00000554226 ZBTB40Q9NUA8 1239 aa16.5■□□□□ 0.23
NEDD1-206ENST00000554226 POLR3EQ9NVU0 708 aa16.5■□□□□ 0.23
NEDD1-206ENST00000554226 MINDY4BA8MYZ0 360 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms