RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 MTMR6Q9Y217 621 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 BZW2Q9Y6E2 419 aaKnown RBP4.36□□□□□ -1.71
LRFN5-204ENST00000554171 CASZ1Q86V15 1759 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 ANKRD30BQ9BXX2 1392 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 SOWAHDA6NJG2 315 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 NDUFA2O43678 99 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 SLC4A1P02730 911 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 TPM1P09493 284 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 EPB42P16452 691 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 RXRAP19793 462 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 LSP1P33241 339 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 CLCN4P51793 760 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 ARHGDIBP52566 201 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 ARFIP1P53367 373 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 ROR2Q01974 943 aaKnown RBP4.36□□□□□ -1.71
LRFN5-204ENST00000554171 SF3B3Q15393 1217 aaKnown RBP4.36□□□□□ -1.71
LRFN5-204ENST00000554171 HIBCHQ6NVY1 386 aaPredicted RBP4.36□□□□□ -1.71
LRFN5-204ENST00000554171 GALNT15Q8N3T1 639 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 NKAPQ8N5F7 415 aaKnown RBP4.36□□□□□ -1.71
LRFN5-204ENST00000554171 CTCFLQ8NI51 663 aaPredicted RBP4.36□□□□□ -1.71
LRFN5-204ENST00000554171 MPHOSPH9Q99550 1183 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 KATNAL1Q9BW62 490 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 BICC1Q9H694 974 aaKnown RBP4.36□□□□□ -1.71
LRFN5-204ENST00000554171 MMRN2Q9H8L6 949 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 STARD7Q9NQZ5 370 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 CFL2Q9Y281 166 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 MTF2Q9Y483 593 aaPredicted RBP4.36□□□□□ -1.71
LRFN5-204ENST00000554171 PCDHB4Q9Y5E5 795 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 IFT140Q96RY7 1462 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 SCAF11Q99590 1463 aaKnown RBP4.36□□□□□ -1.71
LRFN5-204ENST00000554171 GOLGA6L6A8MZA4 724 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 WDR46O15213 610 aaKnown RBP4.36□□□□□ -1.71
LRFN5-204ENST00000554171 TACC1O75410 805 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 DGKIO75912 1065 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 NR3C2P08235 984 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 MYL3P08590 195 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 FGRP09769 529 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 PNMA6AP0CW24 399 aaPredicted RBP4.36□□□□□ -1.71
LRFN5-204ENST00000554171 USP8P40818 1118 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 RNF144AP50876 292 aaPredicted RBP4.36□□□□□ -1.71
LRFN5-204ENST00000554171 MCL1Q07820 350 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 RRP12Q5JTH9 1297 aaKnown RBP4.36□□□□□ -1.71
LRFN5-204ENST00000554171 THEMIS2Q5TEJ8 643 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 NUGGCQ68CJ6 796 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 CAPRIN2Q6IMN6 1127 aaKnown RBP4.36□□□□□ -1.71
LRFN5-204ENST00000554171 FOXR1Q6PIV2 292 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 MAMDC2Q7Z304 686 aaPredicted RBP4.36□□□□□ -1.71
LRFN5-204ENST00000554171 FAM83AQ86UY5 434 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 SYT2Q8N9I0 419 aaPredicted RBP4.36□□□□□ -1.71
LRFN5-204ENST00000554171 CCHCR1Q8TD31 782 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 JPH3Q8WXH2 748 aaPredicted RBP4.36□□□□□ -1.71
LRFN5-204ENST00000554171 HERVK_113Q902F9 699 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 SKA1Q96BD8 255 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 VWCEQ96DN2 955 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 ISCA1Q9BUE6 129 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 FAM129AQ9BZQ8 928 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 OSBPL2Q9H1P3 480 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 VCX3BQ9H321 246 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 SSUH2Q9Y2M2 353 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 TLL2Q9Y6L7 1015 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 SOCS5O75159 536 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 KCNC4Q03721 635 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 KLHL30Q0D2K2 578 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 USH1GQ495M9 461 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 CYP27C1Q4G0S4 372 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 PPP1R18Q6NYC8 613 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 CWC27Q6UX04 472 aaKnown RBP4.35□□□□□ -1.71
LRFN5-204ENST00000554171 ARMC9Q7Z3E5 817 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 KIAA0907Q7Z7F0 614 aaPredicted RBP4.35□□□□□ -1.71
LRFN5-204ENST00000554171 MTMR14Q8NCE2 650 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 MPHOSPH6Q99547 160 aaKnown RBP4.35□□□□□ -1.71
LRFN5-204ENST00000554171 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.35□□□□□ -1.71
LRFN5-204ENST00000554171 NRDE2Q9H7Z3 1164 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 UCK1Q9HA47 277 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 ZCCHC17Q9NP64 241 aaKnown RBP4.35□□□□□ -1.71
LRFN5-204ENST00000554171 AATFQ9NY61 560 aaKnown RBP eCLIP4.35□□□□□ -1.71
LRFN5-204ENST00000554171 WDR62O43379 1518 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 NSD2O96028 1365 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 KIAA1217Q5T5P2 1943 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 FAM177BA6PVY3 158 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 GNAT3A8MTJ3 354 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 TMEM232C9JQI7 657 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 EVI5O60447 810 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 KIAA0754O94854 1291 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 MTHFD1P11586 935 aaKnown RBP4.35□□□□□ -1.71
LRFN5-204ENST00000554171 SGCGQ13326 291 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 MOGSQ13724 837 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 E2F2Q14209 437 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 TUBB8Q3ZCM7 444 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 INTS11Q5TA45 600 aaKnown RBP4.35□□□□□ -1.71
LRFN5-204ENST00000554171 NCAPH2Q6IBW4 605 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 DUS1LQ6P1R4 473 aaKnown RBP4.35□□□□□ -1.71
LRFN5-204ENST00000554171 SESTD1Q86VW0 696 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 WDR49Q8IV35 697 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.35□□□□□ -1.71
LRFN5-204ENST00000554171 CCDC150Q8NCX0 1101 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 HDAC11Q96DB2 347 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 CFAP36Q96G28 342 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 TAOK3Q9H2K8 898 aa4.35□□□□□ -1.71
LRFN5-204ENST00000554171 CLSTN2Q9H4D0 955 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms