RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ZXDAP98168 799 aa4.52□□□□□ -1.69
SRP54-204ENST00000553923 TAGLNQ01995 201 aaKnown RBP4.52□□□□□ -1.69
SRP54-204ENST00000553923 AEBP1Q8IUX7 1158 aa4.52□□□□□ -1.69
SRP54-204ENST00000553923 CARFQ8N187 725 aa4.52□□□□□ -1.69
SRP54-204ENST00000553923 REXO1Q8N1G1 1221 aaKnown RBP4.52□□□□□ -1.69
SRP54-204ENST00000553923 ZNF296Q8WUU4 475 aaPredicted RBP4.52□□□□□ -1.69
SRP54-204ENST00000553923 SLC9A7Q96T83 725 aa4.52□□□□□ -1.69
SRP54-204ENST00000553923 C1QTNF3Q9BXJ4 246 aa4.52□□□□□ -1.69
SRP54-204ENST00000553923 USP40Q9NVE5 1235 aa4.52□□□□□ -1.69
SRP54-204ENST00000553923 FBXL21Q9UKT6 434 aa4.52□□□□□ -1.69
SRP54-204ENST00000553923 SUPT16HQ9Y5B9 1047 aaKnown RBP4.52□□□□□ -1.69
SRP54-204ENST00000553923 C9IYK1 514 aa4.51□□□□□ -1.69
SRP54-204ENST00000553923 ASGR2P07307 311 aa4.51□□□□□ -1.69
SRP54-204ENST00000553923 GSTM1P09488 218 aa4.51□□□□□ -1.69
SRP54-204ENST00000553923 CNR2P34972 360 aa4.51□□□□□ -1.69
SRP54-204ENST00000553923 B3GNT8Q7Z7M8 397 aa4.51□□□□□ -1.69
SRP54-204ENST00000553923 C7orf61Q8IZ16 206 aa4.51□□□□□ -1.69
SRP54-204ENST00000553923 PDLIM7Q9NR12 457 aa4.51□□□□□ -1.69
SRP54-204ENST00000553923 SPATA6Q9NWH7 488 aaPredicted RBP4.51□□□□□ -1.69
SRP54-204ENST00000553923 PALD1Q9ULE6 856 aa4.51□□□□□ -1.69
SRP54-204ENST00000553923 F8W031 263 aaPredicted RBP4.5□□□□□ -1.69
SRP54-204ENST00000553923 GLI4P10075 376 aa4.5□□□□□ -1.69
SRP54-204ENST00000553923 ACRP10323 421 aa4.5□□□□□ -1.69
SRP54-204ENST00000553923 CORO7P57737 925 aa4.5□□□□□ -1.69
SRP54-204ENST00000553923 ANKRD39Q53RE8 183 aa4.5□□□□□ -1.69
SRP54-204ENST00000553923 INTS3Q68E01 1043 aaKnown RBP4.5□□□□□ -1.69
SRP54-204ENST00000553923 GK5Q6ZS86 529 aa4.5□□□□□ -1.69
SRP54-204ENST00000553923 DDX1Q92499 740 aaKnown RBP4.5□□□□□ -1.69
SRP54-204ENST00000553923 FCRL3Q96P31 734 aaPredicted RBP4.5□□□□□ -1.69
SRP54-204ENST00000553923 SMPD4Q9NXE4 827 aa4.5□□□□□ -1.69
SRP54-204ENST00000553923 UBP1Q9NZI7 540 aa4.5□□□□□ -1.69
SRP54-204ENST00000553923 SUCOQ9UBS9 1254 aaKnown RBP4.5□□□□□ -1.69
SRP54-204ENST00000553923 ADAMTS1Q9UHI8 967 aa4.5□□□□□ -1.69
SRP54-204ENST00000553923 H0Y8X5 98 aa4.49□□□□□ -1.69
SRP54-204ENST00000553923 LRRFIP1Q32MZ4 808 aaKnown RBP4.49□□□□□ -1.69
SRP54-204ENST00000553923 SEZ6Q53EL9 994 aa4.49□□□□□ -1.69
SRP54-204ENST00000553923 CPZQ66K79 652 aa4.49□□□□□ -1.69
SRP54-204ENST00000553923 BICRALQ6AI39 1079 aa4.49□□□□□ -1.69
SRP54-204ENST00000553923 CYP2R1Q6VVX0 501 aa4.49□□□□□ -1.69
SRP54-204ENST00000553923 ZNF761Q86XN6 746 aaPredicted RBP4.49□□□□□ -1.69
SRP54-204ENST00000553923 SLITRK4Q8IW52 837 aa4.49□□□□□ -1.69
SRP54-204ENST00000553923 NOX5Q96PH1 765 aa4.49□□□□□ -1.69
SRP54-204ENST00000553923 SSBP3Q9BWW4 388 aaPredicted RBP4.49□□□□□ -1.69
SRP54-204ENST00000553923 A0A1W2PQ27 194 aa4.48□□□□□ -1.69
SRP54-204ENST00000553923 A0A1W2PQ64 194 aa4.48□□□□□ -1.69
SRP54-204ENST00000553923 A0A1W2PQC6 194 aa4.48□□□□□ -1.69
SRP54-204ENST00000553923 A0A1W2PQD8 194 aa4.48□□□□□ -1.69
SRP54-204ENST00000553923 SUV39H1O43463 412 aa4.48□□□□□ -1.69
SRP54-204ENST00000553923 PMLP29590 882 aa4.48□□□□□ -1.69
SRP54-204ENST00000553923 ZNF445P59923 1031 aa4.48□□□□□ -1.69
SRP54-204ENST00000553923 SND1Q7KZF4 910 aaKnown RBP eCLIP4.48□□□□□ -1.69
SRP54-204ENST00000553923 PPFIBP1Q86W92 1011 aa4.48□□□□□ -1.69
SRP54-204ENST00000553923 JAMLQ86YT9 394 aa4.48□□□□□ -1.69
SRP54-204ENST00000553923 NAT16Q8N8M0 369 aa4.48□□□□□ -1.69
SRP54-204ENST00000553923 SLC16A11Q8NCK7 471 aa4.48□□□□□ -1.69
SRP54-204ENST00000553923 TSPAN17Q96FV3 270 aa4.48□□□□□ -1.69
SRP54-204ENST00000553923 DSCC1Q9BVC3 393 aa4.48□□□□□ -1.69
SRP54-204ENST00000553923 TRAIPQ9BWF2 469 aa4.48□□□□□ -1.69
SRP54-204ENST00000553923 VTI1BQ9UEU0 232 aa4.48□□□□□ -1.69
SRP54-204ENST00000553923 TACR1P25103 407 aa4.47□□□□□ -1.69
SRP54-204ENST00000553923 ZNF165P49910 485 aa4.47□□□□□ -1.69
SRP54-204ENST00000553923 TTC9BQ8N6N2 239 aa4.47□□□□□ -1.69
SRP54-204ENST00000553923 CPA5Q8WXQ8 436 aa4.47□□□□□ -1.69
SRP54-204ENST00000553923 PTCHD1Q96NR3 888 aa4.47□□□□□ -1.69
SRP54-204ENST00000553923 SAMD11Q96NU1 681 aa4.47□□□□□ -1.69
SRP54-204ENST00000553923 BCAS3Q9H6U6 928 aa4.47□□□□□ -1.69
SRP54-204ENST00000553923 GP6Q9HCN6 339 aa4.47□□□□□ -1.69
SRP54-204ENST00000553923 FBLN5Q9UBX5 448 aa4.47□□□□□ -1.69
SRP54-204ENST00000553923 FAN1Q9Y2M0 1017 aa4.47□□□□□ -1.69
SRP54-204ENST00000553923 PPP1R11O60927 126 aaPredicted RBP4.46□□□□□ -1.7
SRP54-204ENST00000553923 ZNF20P17024 532 aa4.46□□□□□ -1.7
SRP54-204ENST00000553923 SARSP49591 514 aaKnown RBP4.46□□□□□ -1.7
SRP54-204ENST00000553923 PMS1P54277 932 aaKnown RBP4.46□□□□□ -1.7
SRP54-204ENST00000553923 GJA9P57773 515 aa4.46□□□□□ -1.7
SRP54-204ENST00000553923 TBC1D10BQ4KMP7 808 aaPredicted RBP4.46□□□□□ -1.7
SRP54-204ENST00000553923 AXDND1Q5T1B0 1012 aaPredicted RBP4.46□□□□□ -1.7
SRP54-204ENST00000553923 DCAF15Q66K64 600 aa4.46□□□□□ -1.7
SRP54-204ENST00000553923 CWF19L1Q69YN2 538 aaKnown RBP4.46□□□□□ -1.7
SRP54-204ENST00000553923 CCDC144CPQ8IYA2 1237 aa4.46□□□□□ -1.7
SRP54-204ENST00000553923 TAB3Q8N5C8 712 aaPredicted RBP4.46□□□□□ -1.7
SRP54-204ENST00000553923 LINC00482Q8N8I6 264 aa4.46□□□□□ -1.7
SRP54-204ENST00000553923 SMARCC2Q8TAQ2 1214 aa4.46□□□□□ -1.7
SRP54-204ENST00000553923 ALG3Q92685 438 aa4.46□□□□□ -1.7
SRP54-204ENST00000553923 BRF1Q92994 677 aa4.46□□□□□ -1.7
SRP54-204ENST00000553923 DHRS1Q96LJ7 313 aa4.46□□□□□ -1.7
SRP54-204ENST00000553923 SORCS2Q96PQ0 1159 aa4.46□□□□□ -1.7
SRP54-204ENST00000553923 NT5C1AQ9BXI3 368 aa4.46□□□□□ -1.7
SRP54-204ENST00000553923 RXFP1Q9HBX9 757 aa4.46□□□□□ -1.7
SRP54-204ENST00000553923 PATL2C9JE40 543 aaKnown RBP4.45□□□□□ -1.7
SRP54-204ENST00000553923 PLATP00750 562 aa4.45□□□□□ -1.7
SRP54-204ENST00000553923 IFNGR1P15260 489 aa4.45□□□□□ -1.7
SRP54-204ENST00000553923 L1CAMP32004 1257 aa4.45□□□□□ -1.7
SRP54-204ENST00000553923 MCM4P33991 863 aa4.45□□□□□ -1.7
SRP54-204ENST00000553923 NOP2P46087 812 aaKnown RBP4.45□□□□□ -1.7
SRP54-204ENST00000553923 APOBRQ0VD83 1088 aa4.45□□□□□ -1.7
SRP54-204ENST00000553923 Q8N1X5 172 aa4.45□□□□□ -1.7
SRP54-204ENST00000553923 ADAMTS17Q8TE56 1095 aa4.45□□□□□ -1.7
SRP54-204ENST00000553923 SMARCC1Q92922 1105 aaPredicted RBP4.45□□□□□ -1.7
SRP54-204ENST00000553923 C8orf49Q96NF6 230 aa4.45□□□□□ -1.7
SRP54-204ENST00000553923 MCMBPQ9BTE3 642 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms