RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 SRSF3P84103 164 aaKnown RBP6.67□□□□□ -1.34
SCFD1-210ENST00000553693 SHDQ96IW2 340 aa6.67□□□□□ -1.34
SCFD1-210ENST00000553693 JMJD8Q96S16 334 aa6.67□□□□□ -1.34
SCFD1-210ENST00000553693 IMPACTQ9P2X3 320 aa6.67□□□□□ -1.34
SCFD1-210ENST00000553693 PPM1BO75688 479 aa6.66□□□□□ -1.34
SCFD1-210ENST00000553693 KRTAP10-2P60368 255 aa6.66□□□□□ -1.34
SCFD1-210ENST00000553693 RBM10P98175 930 aaKnown RBP6.66□□□□□ -1.34
SCFD1-210ENST00000553693 PPP2R5EQ16537 467 aa6.66□□□□□ -1.34
SCFD1-210ENST00000553693 KLHL25Q9H0H3 589 aa6.66□□□□□ -1.34
SCFD1-210ENST00000553693 ACBD3Q9H3P7 528 aa6.66□□□□□ -1.34
SCFD1-210ENST00000553693 GCM1Q9NP62 436 aa6.66□□□□□ -1.34
SCFD1-210ENST00000553693 TNFRSF12AQ9NP84 129 aa6.66□□□□□ -1.34
SCFD1-210ENST00000553693 CNOT6Q9ULM6 557 aaKnown RBP6.66□□□□□ -1.34
SCFD1-210ENST00000553693 TBC1D8O95759 1140 aa6.65□□□□□ -1.34
SCFD1-210ENST00000553693 NAT2P11245 290 aa6.65□□□□□ -1.34
SCFD1-210ENST00000553693 VIPR1P32241 457 aa6.65□□□□□ -1.34
SCFD1-210ENST00000553693 CEBPAP49715 358 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-210ENST00000553693 CASP7P55210 303 aa6.65□□□□□ -1.34
SCFD1-210ENST00000553693 CORO7P57737 925 aa6.65□□□□□ -1.34
SCFD1-210ENST00000553693 PPP2R5DQ14738 602 aa6.65□□□□□ -1.34
SCFD1-210ENST00000553693 EEF1DP3Q658K8 133 aa6.65□□□□□ -1.34
SCFD1-210ENST00000553693 ADAT2Q7Z6V5 191 aaKnown RBP6.65□□□□□ -1.34
SCFD1-210ENST00000553693 TMEM52Q8NDY8 209 aa6.65□□□□□ -1.34
SCFD1-210ENST00000553693 PTCHD1Q96NR3 888 aa6.65□□□□□ -1.34
SCFD1-210ENST00000553693 FCRL3Q96P31 734 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-210ENST00000553693 MBD1Q9UIS9 605 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-210ENST00000553693 A0A1W2PQJ5 194 aa6.64□□□□□ -1.35
SCFD1-210ENST00000553693 EPHX1P07099 455 aa6.64□□□□□ -1.35
SCFD1-210ENST00000553693 IFNGR1P15260 489 aa6.64□□□□□ -1.35
SCFD1-210ENST00000553693 SDHBP21912 280 aa6.64□□□□□ -1.35
SCFD1-210ENST00000553693 KIR3DS1Q14943 382 aa6.64□□□□□ -1.35
SCFD1-210ENST00000553693 RAB3GAP1Q15042 981 aa6.64□□□□□ -1.35
SCFD1-210ENST00000553693 ZNF385BQ569K4 471 aa6.64□□□□□ -1.35
SCFD1-210ENST00000553693 RCSD1Q6JBY9 416 aa6.64□□□□□ -1.35
SCFD1-210ENST00000553693 DBX2Q6ZNG2 339 aa6.64□□□□□ -1.35
SCFD1-210ENST00000553693 TMEM151BQ8IW70 566 aa6.64□□□□□ -1.35
SCFD1-210ENST00000553693 ADCY4Q8NFM4 1077 aa6.64□□□□□ -1.35
SCFD1-210ENST00000553693 RELTQ969Z4 430 aa6.64□□□□□ -1.35
SCFD1-210ENST00000553693 SIGLEC10Q96LC7 697 aa6.64□□□□□ -1.35
SCFD1-210ENST00000553693 SGPP1Q9BX95 441 aa6.64□□□□□ -1.35
SCFD1-210ENST00000553693 CAPN10Q9HC96 672 aa6.64□□□□□ -1.35
SCFD1-210ENST00000553693 PCDHB10Q9UN67 800 aa6.64□□□□□ -1.35
SCFD1-210ENST00000553693 IRAK3Q9Y616 596 aa6.64□□□□□ -1.35
SCFD1-210ENST00000553693 NUDT19A8MXV4 375 aa6.63□□□□□ -1.35
SCFD1-210ENST00000553693 KRTAP1-1Q07627 177 aa6.63□□□□□ -1.35
SCFD1-210ENST00000553693 GRB10Q13322 594 aa6.63□□□□□ -1.35
SCFD1-210ENST00000553693 NR1I3Q14994 352 aa6.63□□□□□ -1.35
SCFD1-210ENST00000553693 VHLLQ6RSH7 139 aa6.63□□□□□ -1.35
SCFD1-210ENST00000553693 TMC6Q7Z403 805 aa6.63□□□□□ -1.35
SCFD1-210ENST00000553693 KLHL6Q8WZ60 621 aa6.63□□□□□ -1.35
SCFD1-210ENST00000553693 ANAPC16Q96DE5 110 aa6.63□□□□□ -1.35
SCFD1-210ENST00000553693 IRF2BPLQ9H1B7 796 aa6.63□□□□□ -1.35
SCFD1-210ENST00000553693 KLHL14Q9P2G3 628 aa6.63□□□□□ -1.35
SCFD1-210ENST00000553693 CGGBP1Q9UFW8 167 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-210ENST00000553693 SUGT1Q9Y2Z0 365 aa6.63□□□□□ -1.35
SCFD1-210ENST00000553693 KCTD3Q9Y597 815 aa6.63□□□□□ -1.35
SCFD1-210ENST00000553693 ANKRD34BA5PLL1 514 aa6.62□□□□□ -1.35
SCFD1-210ENST00000553693 STXBP3O00186 592 aa6.62□□□□□ -1.35
SCFD1-210ENST00000553693 N4BP3O15049 544 aa6.62□□□□□ -1.35
SCFD1-210ENST00000553693 AMPD2Q01433 879 aa6.62□□□□□ -1.35
SCFD1-210ENST00000553693 CBX2Q14781 532 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-210ENST00000553693 KIAA1211LQ6NV74 962 aa6.62□□□□□ -1.35
SCFD1-210ENST00000553693 VPS37DQ86XT2 251 aa6.62□□□□□ -1.35
SCFD1-210ENST00000553693 CRACR2BQ8N4Y2 399 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-210ENST00000553693 RCC1LQ96I51 464 aaKnown RBP6.62□□□□□ -1.35
SCFD1-210ENST00000553693 FGD4Q96M96 766 aa6.62□□□□□ -1.35
SCFD1-210ENST00000553693 CNTD2Q9H8S5 307 aa6.62□□□□□ -1.35
SCFD1-210ENST00000553693 PDLIM7Q9NR12 457 aa6.62□□□□□ -1.35
SCFD1-210ENST00000553693 BACE2Q9Y5Z0 518 aa6.62□□□□□ -1.35
SCFD1-210ENST00000553693 AURKAO14965 403 aa6.61□□□□□ -1.35
SCFD1-210ENST00000553693 SRGAP3O43295 1099 aa6.61□□□□□ -1.35
SCFD1-210ENST00000553693 CYBBP04839 570 aa6.61□□□□□ -1.35
SCFD1-210ENST00000553693 ATF4P18848 351 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-210ENST00000553693 ERCC5P28715 1186 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-210ENST00000553693 L1CAMP32004 1257 aa6.61□□□□□ -1.35
SCFD1-210ENST00000553693 MAPKAPK2P49137 400 aa6.61□□□□□ -1.35
SCFD1-210ENST00000553693 SEPHS1P49903 392 aa6.61□□□□□ -1.35
SCFD1-210ENST00000553693 ZNF143P52747 638 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-210ENST00000553693 EPHB3P54753 998 aa6.61□□□□□ -1.35
SCFD1-210ENST00000553693 MVKQ03426 396 aa6.61□□□□□ -1.35
SCFD1-210ENST00000553693 GNL2Q13823 731 aaKnown RBP6.61□□□□□ -1.35
SCFD1-210ENST00000553693 NCAPHQ15003 741 aa6.61□□□□□ -1.35
SCFD1-210ENST00000553693 TCERG1LQ5VWI1 586 aa6.61□□□□□ -1.35
SCFD1-210ENST00000553693 RPTNQ6XPR3 784 aa6.61□□□□□ -1.35
SCFD1-210ENST00000553693 ARHGEF39Q8N4T4 335 aa6.61□□□□□ -1.35
SCFD1-210ENST00000553693 FAM169BQ8N8A8 192 aa6.61□□□□□ -1.35
SCFD1-210ENST00000553693 MZB1Q8WU39 189 aa6.61□□□□□ -1.35
SCFD1-210ENST00000553693 TRBV23OR9-2A0A075B6M9 112 aa6.6□□□□□ -1.35
SCFD1-210ENST00000553693 TCF3P15923 654 aa6.6□□□□□ -1.35
SCFD1-210ENST00000553693 PI3P19957 117 aa6.6□□□□□ -1.35
SCFD1-210ENST00000553693 CDR1P51861 262 aa6.6□□□□□ -1.35
SCFD1-210ENST00000553693 SSPNQ14714 243 aa6.6□□□□□ -1.35
SCFD1-210ENST00000553693 PLEKHN1Q494U1 663 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-210ENST00000553693 TNNI3KQ59H18 835 aa6.6□□□□□ -1.35
SCFD1-210ENST00000553693 BICRALQ6AI39 1079 aa6.6□□□□□ -1.35
SCFD1-210ENST00000553693 POMZP3Q6PJE2 187 aa6.6□□□□□ -1.35
SCFD1-210ENST00000553693 ZC3H14Q6PJT7 736 aaKnown RBP6.6□□□□□ -1.35
SCFD1-210ENST00000553693 PAQR3Q6TCH7 311 aa6.6□□□□□ -1.35
SCFD1-210ENST00000553693 CABP7Q86V35 215 aa6.6□□□□□ -1.35
SCFD1-210ENST00000553693 SUSD2Q9UGT4 822 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms