RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 PRPF40BQ6NWY9 871 aaKnown RBP6□□□□□ -1.45
VTI1B-202ENST00000553619 TDRD7Q8NHU6 1098 aaKnown RBP6□□□□□ -1.45
VTI1B-202ENST00000553619 TBC1D16Q8TBP0 767 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 TBC1D22AQ8WUA7 517 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 MKNK1Q9BUB5 465 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 HMG20BQ9P0W2 317 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 LRP2BPQ9P2M1 347 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 KCNMB2Q9Y691 235 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 RAD50Q92878 1312 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 C10orf71Q711Q0 1435 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 MED23Q9ULK4 1368 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 DLL1O00548 723 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 MMP20O60882 483 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 GHRHP01286 108 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 CYP2E1P05181 493 aaPredicted RBP5.99□□□□□ -1.45
VTI1B-202ENST00000553619 IL1R1P14778 569 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 MCAMP43121 646 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 GSTO1P78417 241 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 UBE3CQ15386 1083 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 IGF2-ASQ6U949 168 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 CWC27Q6UX04 472 aaKnown RBP5.99□□□□□ -1.45
VTI1B-202ENST00000553619 CERS3Q8IU89 383 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 STK32AQ8WU08 396 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 COL26A1Q96A83 441 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 PLD4Q96BZ4 506 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 NSUN5Q96P11 429 aaKnown RBP5.99□□□□□ -1.45
VTI1B-202ENST00000553619 PSMD1Q99460 953 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 NOL10Q9BSC4 688 aaKnown RBP5.99□□□□□ -1.45
VTI1B-202ENST00000553619 RTFDC1Q9BY42 306 aaPredicted RBP5.99□□□□□ -1.45
VTI1B-202ENST00000553619 CD209Q9NNX6 404 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 POLLQ9UGP5 575 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 ZMIZ1Q9ULJ6 1067 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 SUGT1Q9Y2Z0 365 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 KIF13BQ9NQT8 1826 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 LRP5O75197 1615 aa5.99□□□□□ -1.45
VTI1B-202ENST00000553619 TNRC6CQ9HCJ0 1690 aaKnown RBP5.98□□□□□ -1.45
VTI1B-202ENST00000553619 CHD4Q14839 1912 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 AKAP11Q9UKA4 1901 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 SLX4Q8IY92 1834 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 KRTAP9-6A0A140TA67 174 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 SNAP23O00161 211 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 SGSM2O43147 1006 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 IDH1O75874 414 aaKnown RBP5.98□□□□□ -1.45
VTI1B-202ENST00000553619 GNAT2P19087 354 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 KCNA3P22001 575 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 ANP32AP39687 249 aaKnown RBP5.98□□□□□ -1.45
VTI1B-202ENST00000553619 MMP14P50281 582 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 RASGRF1Q13972 1273 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 TRIP4Q15650 581 aaPredicted RBP5.98□□□□□ -1.45
VTI1B-202ENST00000553619 FAM26DQ5JW98 314 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 SLC9C2Q5TAH2 1124 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 NBPF11Q86T75 865 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 ETFBKMTQ8IXQ9 262 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 PIK3R5Q8WYR1 880 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 APPBP2Q92624 585 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 USP26Q9BXU7 913 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 C22orf23Q9BZE7 217 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 SAP130Q9H0E3 1048 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 RAI14Q9P0K7 980 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 CXXC1Q9P0U4 656 aaPredicted RBP5.98□□□□□ -1.45
VTI1B-202ENST00000553619 ABCF2Q9UG63 623 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 FNDC3AQ9Y2H6 1198 aaKnown RBP5.98□□□□□ -1.45
VTI1B-202ENST00000553619 ARAP2Q8WZ64 1704 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 MAST3O60307 1309 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 SALL1Q9NSC2 1324 aa5.98□□□□□ -1.45
VTI1B-202ENST00000553619 CACNA1SQ13698 1873 aa5.97□□□□□ -1.45
VTI1B-202ENST00000553619 CCDC88AQ3V6T2 1871 aa5.97□□□□□ -1.45
VTI1B-202ENST00000553619 HYAL3O43820 417 aaPredicted RBP5.97□□□□□ -1.45
VTI1B-202ENST00000553619 BAG3O95817 575 aa5.97□□□□□ -1.45
VTI1B-202ENST00000553619 LDHBP07195 334 aaKnown RBP5.97□□□□□ -1.45
VTI1B-202ENST00000553619 ZKSCAN1P17029 563 aaPredicted RBP5.97□□□□□ -1.45
VTI1B-202ENST00000553619 ADD2P35612 726 aa5.97□□□□□ -1.45
VTI1B-202ENST00000553619 FKBP1AP62942 108 aaKnown RBP5.97□□□□□ -1.45
VTI1B-202ENST00000553619 KIAA2012Q0VF49 1180 aa5.97□□□□□ -1.45
VTI1B-202ENST00000553619 CHAF1AQ13111 956 aaPredicted RBP5.97□□□□□ -1.45
VTI1B-202ENST00000553619 NMIQ13287 307 aaPredicted RBP5.97□□□□□ -1.45
VTI1B-202ENST00000553619 OCLNQ16625 522 aa5.97□□□□□ -1.45
VTI1B-202ENST00000553619 TMEM164Q5U3C3 297 aa5.97□□□□□ -1.45
VTI1B-202ENST00000553619 TTLL5Q6EMB2 1281 aa5.97□□□□□ -1.45
VTI1B-202ENST00000553619 GDF6Q6KF10 455 aaPredicted RBP5.97□□□□□ -1.45
VTI1B-202ENST00000553619 TTC16Q8NEE8 873 aa5.97□□□□□ -1.45
VTI1B-202ENST00000553619 JDP2Q8WYK2 163 aa5.97□□□□□ -1.45
VTI1B-202ENST00000553619 DSCC1Q9BVC3 393 aa5.97□□□□□ -1.45
VTI1B-202ENST00000553619 MRIQ9BWK5 157 aa5.97□□□□□ -1.45
VTI1B-202ENST00000553619 ANTXR1Q9H6X2 564 aa5.97□□□□□ -1.45
VTI1B-202ENST00000553619 ANO2Q9NQ90 1003 aa5.97□□□□□ -1.45
VTI1B-202ENST00000553619 CTNNA3Q9UI47 895 aa5.97□□□□□ -1.45
VTI1B-202ENST00000553619 MYH13Q9UKX3 1938 aa5.97□□□□□ -1.45
VTI1B-202ENST00000553619 FAM205AQ6ZU69 1335 aa5.97□□□□□ -1.45
VTI1B-202ENST00000553619 RPAP1Q9BWH6 1393 aaPredicted RBP5.96□□□□□ -1.45
VTI1B-202ENST00000553619 A0A1B0GUL6 1792 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 DLEC1Q9Y238 1755 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 MYH7P12883 1935 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 PPIP5K2O43314 1243 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 ALX3O95076 343 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 HOXD8P13378 290 aaPredicted RBP5.96□□□□□ -1.46
VTI1B-202ENST00000553619 CYP7A1P22680 504 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 PSMA5P28066 241 aa5.96□□□□□ -1.46
VTI1B-202ENST00000553619 RBM25P49756 843 aaKnown RBP5.96□□□□□ -1.46
VTI1B-202ENST00000553619 ANAPC15P60006 121 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms