RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 FEM1BQ9UK73 627 aa14.05□□□□□ -0.16
SRP54-203ENST00000553544 PCDHA11Q9Y5I1 949 aa14.05□□□□□ -0.16
SRP54-203ENST00000553544 CHD7Q9P2D1 2997 aa14.04□□□□□ -0.16
SRP54-203ENST00000553544 MYH4Q9Y623 1939 aa14.04□□□□□ -0.16
SRP54-203ENST00000553544 FDX1P10109 184 aa14.04□□□□□ -0.16
SRP54-203ENST00000553544 GNAT2P19087 354 aa14.04□□□□□ -0.16
SRP54-203ENST00000553544 RABGGTBP53611 331 aa14.04□□□□□ -0.16
SRP54-203ENST00000553544 PDE1AP54750 535 aa14.04□□□□□ -0.16
SRP54-203ENST00000553544 SKIV2LQ15477 1246 aaKnown RBP14.04□□□□□ -0.16
SRP54-203ENST00000553544 ZMYM1Q5SVZ6 1142 aa14.04□□□□□ -0.16
SRP54-203ENST00000553544 PPP2R2DQ66LE6 453 aa14.04□□□□□ -0.16
SRP54-203ENST00000553544 PPP4R3CPQ6ZMV5 832 aa14.04□□□□□ -0.16
SRP54-203ENST00000553544 MICALL1Q8N3F8 863 aa14.04□□□□□ -0.16
SRP54-203ENST00000553544 MKL1Q969V6 931 aa14.04□□□□□ -0.16
SRP54-203ENST00000553544 SEC62Q99442 399 aaKnown RBP14.04□□□□□ -0.16
SRP54-203ENST00000553544 EPB41L4AQ9HCS5 686 aaPredicted RBP14.04□□□□□ -0.16
SRP54-203ENST00000553544 PLXNA1Q9UIW2 1896 aa14.04□□□□□ -0.16
SRP54-203ENST00000553544 ASB14A6NK59 587 aa14.03□□□□□ -0.16
SRP54-203ENST00000553544 PATL2C9JE40 543 aaKnown RBP14.03□□□□□ -0.16
SRP54-203ENST00000553544 DYNC1LI2O43237 492 aaPredicted RBP14.03□□□□□ -0.16
SRP54-203ENST00000553544 IGHDP01880 384 aa14.03□□□□□ -0.16
SRP54-203ENST00000553544 RASA1P20936 1047 aa14.03□□□□□ -0.16
SRP54-203ENST00000553544 TFF2Q03403 129 aa14.03□□□□□ -0.16
SRP54-203ENST00000553544 FSCN1Q16658 493 aaKnown RBP14.03□□□□□ -0.16
SRP54-203ENST00000553544 IQSEC1Q6DN90 963 aa14.03□□□□□ -0.16
SRP54-203ENST00000553544 ZNF444Q8N0Y2 327 aaPredicted RBP14.03□□□□□ -0.16
SRP54-203ENST00000553544 FGD4Q96M96 766 aa14.03□□□□□ -0.16
SRP54-203ENST00000553544 NECAB3Q96P71 396 aaPredicted RBP14.03□□□□□ -0.16
SRP54-203ENST00000553544 FSD1Q9BTV5 496 aa14.03□□□□□ -0.16
SRP54-203ENST00000553544 NOC4LQ9BVI4 516 aaKnown RBP14.03□□□□□ -0.16
SRP54-203ENST00000553544 KATNBL1Q9H079 304 aa14.03□□□□□ -0.16
SRP54-203ENST00000553544 TRPV6Q9H1D0 765 aa14.03□□□□□ -0.16
SRP54-203ENST00000553544 RWDD1Q9H446 243 aaPredicted RBP14.03□□□□□ -0.16
SRP54-203ENST00000553544 ZNF287Q9HBT7 754 aa14.03□□□□□ -0.16
SRP54-203ENST00000553544 ZBTB47Q9UFB7 747 aaPredicted RBP14.03□□□□□ -0.16
SRP54-203ENST00000553544 GNEQ9Y223 722 aaKnown RBP14.03□□□□□ -0.16
SRP54-203ENST00000553544 ARIH1Q9Y4X5 557 aaPredicted RBP14.03□□□□□ -0.16
SRP54-203ENST00000553544 COL11A1P12107 1806 aaPredicted RBP14.03□□□□□ -0.16
SRP54-203ENST00000553544 UMODL1Q5DID0 1318 aa14.02□□□□□ -0.17
SRP54-203ENST00000553544 ZBBXA8MT70 800 aa14.02□□□□□ -0.17
SRP54-203ENST00000553544 MINDY4BA8MYZ0 360 aa14.02□□□□□ -0.17
SRP54-203ENST00000553544 GTPBP6O43824 516 aaPredicted RBP14.02□□□□□ -0.17
SRP54-203ENST00000553544 MYOGP15173 224 aa14.02□□□□□ -0.17
SRP54-203ENST00000553544 ATP2A2P16615 1042 aaKnown RBP14.02□□□□□ -0.17
SRP54-203ENST00000553544 POU3F3P20264 500 aaPredicted RBP14.02□□□□□ -0.17
SRP54-203ENST00000553544 CNTN2Q02246 1040 aa14.02□□□□□ -0.17
SRP54-203ENST00000553544 STK11IPQ8N1F8 1099 aa14.02□□□□□ -0.17
SRP54-203ENST00000553544 HOMER2Q9NSB8 354 aa14.02□□□□□ -0.17
SRP54-203ENST00000553544 Q9Y3F1 56 aa14.02□□□□□ -0.17
SRP54-203ENST00000553544 SUPT16HQ9Y5B9 1047 aaKnown RBP14.02□□□□□ -0.17
SRP54-203ENST00000553544 XIRP2A4UGR9 3374 aa14.02□□□□□ -0.17
SRP54-203ENST00000553544 ASTN1O14525 1302 aa14.01□□□□□ -0.17
SRP54-203ENST00000553544 GRIN2DO15399 1336 aa14.01□□□□□ -0.17
SRP54-203ENST00000553544 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.01□□□□□ -0.17
SRP54-203ENST00000553544 B4GALT4O60513 344 aa14.01□□□□□ -0.17
SRP54-203ENST00000553544 TMEM67Q5HYA8 995 aa14.01□□□□□ -0.17
SRP54-203ENST00000553544 TLK2Q86UE8 772 aa14.01□□□□□ -0.17
SRP54-203ENST00000553544 IFNL3Q8IZI9 196 aa14.01□□□□□ -0.17
SRP54-203ENST00000553544 FAM133AQ8N9E0 248 aa14.01□□□□□ -0.17
SRP54-203ENST00000553544 EVI5LQ96CN4 794 aa14.01□□□□□ -0.17
SRP54-203ENST00000553544 LNPKQ9C0E8 428 aa14.01□□□□□ -0.17
SRP54-203ENST00000553544 ACAD9Q9H845 621 aa14.01□□□□□ -0.17
SRP54-203ENST00000553544 SYNPO2Q9UMS6 1093 aa14.01□□□□□ -0.17
SRP54-203ENST00000553544 FOXP2O15409 715 aa14□□□□□ -0.17
SRP54-203ENST00000553544 TTLL1O95922 423 aa14□□□□□ -0.17
SRP54-203ENST00000553544 PFKMP08237 780 aa14□□□□□ -0.17
SRP54-203ENST00000553544 SUPT20HL2P0C7V6 817 aa14□□□□□ -0.17
SRP54-203ENST00000553544 BMP3P12645 472 aa14□□□□□ -0.17
SRP54-203ENST00000553544 SMPD1P17405 629 aa14□□□□□ -0.17
SRP54-203ENST00000553544 HOXD11P31277 338 aaPredicted RBP14□□□□□ -0.17
SRP54-203ENST00000553544 KCNQ1P51787 676 aa14□□□□□ -0.17
SRP54-203ENST00000553544 TICAM2Q86XR7 235 aa14□□□□□ -0.17
SRP54-203ENST00000553544 GMCL1P1Q8NEA9 526 aa14□□□□□ -0.17
SRP54-203ENST00000553544 CHURC1Q8WUH1 139 aa14□□□□□ -0.17
SRP54-203ENST00000553544 AGBL1Q96MI9 1066 aa14□□□□□ -0.17
SRP54-203ENST00000553544 WNT8AQ9H1J5 351 aa14□□□□□ -0.17
SRP54-203ENST00000553544 MTMR4Q9NYA4 1195 aa14□□□□□ -0.17
SRP54-203ENST00000553544 COG5Q9UP83 839 aa14□□□□□ -0.17
SRP54-203ENST00000553544 HCN4Q9Y3Q4 1203 aa14□□□□□ -0.17
SRP54-203ENST00000553544 MTCH2Q9Y6C9 303 aa14□□□□□ -0.17
SRP54-203ENST00000553544 IGKV6D-41A0A0C4DH26 115 aa13.99□□□□□ -0.17
SRP54-203ENST00000553544 SOWAHBA6NEL2 793 aa13.99□□□□□ -0.17
SRP54-203ENST00000553544 TMEM232C9JQI7 657 aa13.99□□□□□ -0.17
SRP54-203ENST00000553544 PSMC6P62333 389 aa13.99□□□□□ -0.17
SRP54-203ENST00000553544 NUCB1Q02818 461 aa13.99□□□□□ -0.17
SRP54-203ENST00000553544 TKFCQ3LXA3 575 aa13.99□□□□□ -0.17
SRP54-203ENST00000553544 SLFN13Q68D06 897 aa13.99□□□□□ -0.17
SRP54-203ENST00000553544 CHD1LQ86WJ1 897 aa13.99□□□□□ -0.17
SRP54-203ENST00000553544 SCLYQ96I15 445 aa13.99□□□□□ -0.17
SRP54-203ENST00000553544 TRERF1Q96PN7 1200 aa13.99□□□□□ -0.17
SRP54-203ENST00000553544 LRFN3Q9BTN0 628 aa13.99□□□□□ -0.17
SRP54-203ENST00000553544 OSBPL3Q9H4L5 887 aa13.99□□□□□ -0.17
SRP54-203ENST00000553544 EPHX3Q9H6B9 360 aa13.99□□□□□ -0.17
SRP54-203ENST00000553544 A1CFQ9NQ94 594 aaKnown RBP13.99□□□□□ -0.17
SRP54-203ENST00000553544 RFXAPO00287 272 aa13.98□□□□□ -0.17
SRP54-203ENST00000553544 APPP05067 770 aa13.98□□□□□ -0.17
SRP54-203ENST00000553544 CA3P07451 260 aa13.98□□□□□ -0.17
SRP54-203ENST00000553544 ACTN1P12814 892 aa13.98□□□□□ -0.17
SRP54-203ENST00000553544 TDO2P48775 406 aa13.98□□□□□ -0.17
SRP54-203ENST00000553544 STAT2P52630 851 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms