RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 CSF2RAP15509 400 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 SMPD1P17405 629 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 DNAJB2P25686 324 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 SNAP25P60880 206 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 GRIN2CQ14957 1233 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 ALX1Q15699 326 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 TMEM240Q5SV17 173 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 RASIP1Q5U651 963 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 IQSEC1Q6DN90 963 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 CXCL17Q6UXB2 119 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 SLC43A3Q8NBI5 491 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 EVI5LQ96CN4 794 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 AP5M1Q9H0R1 490 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 CYP39A1Q9NYL5 469 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 SALL3Q9BXA9 1300 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 DYNC1LI2O43237 492 aaPredicted RBP11.09□□□□□ -0.63
CHD8-203ENST00000553283 ZEB2O60315 1214 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 ICAM1P05362 532 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 FSCN1Q16658 493 aaKnown RBP11.09□□□□□ -0.63
CHD8-203ENST00000553283 MUM1L1Q5H9M0 696 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 ANKRD45Q5TZF3 282 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 VPS53Q5VIR6 699 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 TAPT1Q6NXT6 567 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 ZNF365Q70YC5 407 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 TLK2Q86UE8 772 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 MORC4Q8TE76 937 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 DCAF4Q8WV16 495 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 TIFAQ96CG3 184 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 SEZ6LQ9BYH1 1024 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 PPP1R12CQ9BZL4 782 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 ZNF576Q9H609 170 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 PDGFCQ9NRA1 345 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 HELLSQ9NRZ9 838 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 ZBTB47Q9UFB7 747 aaPredicted RBP11.09□□□□□ -0.63
CHD8-203ENST00000553283 CCPG1Q9ULG6 757 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 Q9Y3F1 56 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 UNC80Q8N2C7 3258 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 MYH4Q9Y623 1939 aa11.09□□□□□ -0.63
CHD8-203ENST00000553283 GRXCR1A8MXD5 290 aa11.08□□□□□ -0.64
CHD8-203ENST00000553283 ACRP10323 421 aa11.08□□□□□ -0.64
CHD8-203ENST00000553283 CYP2C18P33260 490 aa11.08□□□□□ -0.64
CHD8-203ENST00000553283 ITGA7Q13683 1181 aa11.08□□□□□ -0.64
CHD8-203ENST00000553283 CCDC96Q2M329 555 aa11.08□□□□□ -0.64
CHD8-203ENST00000553283 TTBK2Q6IQ55 1244 aa11.08□□□□□ -0.64
CHD8-203ENST00000553283 PSRC1Q6PGN9 363 aaPredicted RBP11.08□□□□□ -0.64
CHD8-203ENST00000553283 BTNL9Q6UXG8 535 aa11.08□□□□□ -0.64
CHD8-203ENST00000553283 NSMFQ6X4W1 530 aa11.08□□□□□ -0.64
CHD8-203ENST00000553283 EEPD1Q7L9B9 569 aa11.08□□□□□ -0.64
CHD8-203ENST00000553283 RASGRP2Q7LDG7 609 aa11.08□□□□□ -0.64
CHD8-203ENST00000553283 TICAM2Q86XR7 235 aa11.08□□□□□ -0.64
CHD8-203ENST00000553283 RANBP17Q9H2T7 1088 aaKnown RBP11.08□□□□□ -0.64
CHD8-203ENST00000553283 VTA1Q9NP79 307 aa11.08□□□□□ -0.64
CHD8-203ENST00000553283 IL23AQ9NPF7 189 aa11.08□□□□□ -0.64
CHD8-203ENST00000553283 TCP11L1Q9NUJ3 509 aa11.08□□□□□ -0.64
CHD8-203ENST00000553283 MTMR7Q9Y216 660 aa11.08□□□□□ -0.64
CHD8-203ENST00000553283 DDX49Q9Y6V7 483 aaKnown RBP11.08□□□□□ -0.64
CHD8-203ENST00000553283 GRIN2DO15399 1336 aa11.08□□□□□ -0.64
CHD8-203ENST00000553283 FGAP02671 866 aa11.07□□□□□ -0.64
CHD8-203ENST00000553283 FGBP02675 491 aa11.07□□□□□ -0.64
CHD8-203ENST00000553283 TOP1P11387 765 aaKnown RBP11.07□□□□□ -0.64
CHD8-203ENST00000553283 PTGS1P23219 599 aa11.07□□□□□ -0.64
CHD8-203ENST00000553283 SLC16A2P36021 539 aa11.07□□□□□ -0.64
CHD8-203ENST00000553283 PDE1AP54750 535 aa11.07□□□□□ -0.64
CHD8-203ENST00000553283 BAATQ14032 418 aaPredicted RBP11.07□□□□□ -0.64
CHD8-203ENST00000553283 MCMDC2Q4G0Z9 681 aa11.07□□□□□ -0.64
CHD8-203ENST00000553283 TMEM63BQ5T3F8 832 aa11.07□□□□□ -0.64
CHD8-203ENST00000553283 SYDE2Q5VT97 1194 aa11.07□□□□□ -0.64
CHD8-203ENST00000553283 KIAA1211Q6ZU35 1233 aa11.07□□□□□ -0.64
CHD8-203ENST00000553283 FBXO16Q8IX29 292 aaPredicted RBP11.07□□□□□ -0.64
CHD8-203ENST00000553283 HERVK_113Q902F9 699 aa11.07□□□□□ -0.64
CHD8-203ENST00000553283 PURBQ96QR8 312 aaKnown RBP11.07□□□□□ -0.64
CHD8-203ENST00000553283 TMEM47Q9BQJ4 181 aa11.07□□□□□ -0.64
CHD8-203ENST00000553283 PBX4Q9BYU1 374 aa11.07□□□□□ -0.64
CHD8-203ENST00000553283 HIPK3Q9H422 1215 aa11.07□□□□□ -0.64
CHD8-203ENST00000553283 TOMM22Q9NS69 142 aa11.07□□□□□ -0.64
CHD8-203ENST00000553283 ADD3Q9UEY8 706 aaKnown RBP11.07□□□□□ -0.64
CHD8-203ENST00000553283 MCM3APO60318 1980 aa11.07□□□□□ -0.64
CHD8-203ENST00000553283 LOC102724159A0A0B4J2E5 919 aa11.06□□□□□ -0.64
CHD8-203ENST00000553283 PBX2P40425 430 aa11.06□□□□□ -0.64
CHD8-203ENST00000553283 PWP2Q15269 919 aaKnown RBP11.06□□□□□ -0.64
CHD8-203ENST00000553283 DUSP28Q4G0W2 176 aa11.06□□□□□ -0.64
CHD8-203ENST00000553283 RRP12Q5JTH9 1297 aaKnown RBP11.06□□□□□ -0.64
CHD8-203ENST00000553283 FAM227BQ96M60 508 aa11.06□□□□□ -0.64
CHD8-203ENST00000553283 NOC4LQ9BVI4 516 aaKnown RBP11.06□□□□□ -0.64
CHD8-203ENST00000553283 TRPV6Q9H1D0 765 aa11.06□□□□□ -0.64
CHD8-203ENST00000553283 GPCPD1Q9NPB8 672 aa11.06□□□□□ -0.64
CHD8-203ENST00000553283 PNMA2Q9UL42 364 aa11.06□□□□□ -0.64
CHD8-203ENST00000553283 A0A0D9SFI3 127 aa11.05□□□□□ -0.64
CHD8-203ENST00000553283 RBM47A0AV96 593 aaKnown RBP11.05□□□□□ -0.64
CHD8-203ENST00000553283 NFIBO00712 420 aa11.05□□□□□ -0.64
CHD8-203ENST00000553283 B4GALT4O60513 344 aa11.05□□□□□ -0.64
CHD8-203ENST00000553283 HSPD1P10809 573 aaKnown RBP11.05□□□□□ -0.64
CHD8-203ENST00000553283 ALDH5A1P51649 535 aaPredicted RBP11.05□□□□□ -0.64
CHD8-203ENST00000553283 CCL23P55773 120 aa11.05□□□□□ -0.64
CHD8-203ENST00000553283 RRP1P56182 461 aaKnown RBP11.05□□□□□ -0.64
CHD8-203ENST00000553283 PSMC6P62333 389 aa11.05□□□□□ -0.64
CHD8-203ENST00000553283 HDAC1Q13547 482 aaPredicted RBP11.05□□□□□ -0.64
CHD8-203ENST00000553283 RAB30Q15771 203 aa11.05□□□□□ -0.64
CHD8-203ENST00000553283 USP38Q8NB14 1042 aa11.05□□□□□ -0.64
CHD8-203ENST00000553283 SYMPKQ92797 1274 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms