RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 LENG1Q96BZ8 264 aaPredicted RBP10.31□□□□□ -0.76
TMEM116-217ENST00000552801 GUCD1Q96NT3 240 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 CDX2Q99626 313 aaPredicted RBP10.31□□□□□ -0.76
TMEM116-217ENST00000552801 ANP32EQ9BTT0 268 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 AP5M1Q9H0R1 490 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 MTIF3Q9H2K0 278 aaKnown RBP10.31□□□□□ -0.76
TMEM116-217ENST00000552801 SEMA6BQ9H3T3 888 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 ACAD9Q9H845 621 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.31□□□□□ -0.76
TMEM116-217ENST00000552801 SYNPO2Q9UMS6 1093 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 STX8Q9UNK0 236 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 RBM19Q9Y4C8 960 aaKnown RBP10.31□□□□□ -0.76
TMEM116-217ENST00000552801 ROBO3Q96MS0 1386 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 TTC41PQ6P2S7 1318 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 A0A0U1RQG5 324 aaPredicted RBP10.3□□□□□ -0.76
TMEM116-217ENST00000552801 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.3□□□□□ -0.76
TMEM116-217ENST00000552801 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.3□□□□□ -0.76
TMEM116-217ENST00000552801 TMEM232C9JQI7 657 aa10.3□□□□□ -0.76
TMEM116-217ENST00000552801 KIAA0355O15063 1070 aa10.3□□□□□ -0.76
TMEM116-217ENST00000552801 EMP3P54852 163 aa10.3□□□□□ -0.76
TMEM116-217ENST00000552801 TFAP4Q01664 338 aa10.3□□□□□ -0.76
TMEM116-217ENST00000552801 MAMDC4Q6UXC1 1216 aa10.3□□□□□ -0.76
TMEM116-217ENST00000552801 IFNL3Q8IZI9 196 aa10.3□□□□□ -0.76
TMEM116-217ENST00000552801 TMEM199Q8N511 208 aa10.3□□□□□ -0.76
TMEM116-217ENST00000552801 GMCL1P1Q8NEA9 526 aa10.3□□□□□ -0.76
TMEM116-217ENST00000552801 REPS2Q8NFH8 660 aa10.3□□□□□ -0.76
TMEM116-217ENST00000552801 CHMP4CQ96CF2 233 aa10.3□□□□□ -0.76
TMEM116-217ENST00000552801 TOX2Q96NM4 488 aa10.3□□□□□ -0.76
TMEM116-217ENST00000552801 DCTPP1Q9H773 170 aa10.3□□□□□ -0.76
TMEM116-217ENST00000552801 SLC38A10Q9HBR0 1119 aa10.3□□□□□ -0.76
TMEM116-217ENST00000552801 TOMM22Q9NS69 142 aa10.3□□□□□ -0.76
TMEM116-217ENST00000552801 MTMR4Q9NYA4 1195 aa10.3□□□□□ -0.76
TMEM116-217ENST00000552801 MTMR7Q9Y216 660 aa10.3□□□□□ -0.76
TMEM116-217ENST00000552801 ELP1O95163 1332 aa10.3□□□□□ -0.76
TMEM116-217ENST00000552801 TMEM265A0A087WTH1 108 aa10.29□□□□□ -0.76
TMEM116-217ENST00000552801 ASB14A6NK59 587 aa10.29□□□□□ -0.76
TMEM116-217ENST00000552801 M0R2C6 588 aa10.29□□□□□ -0.76
TMEM116-217ENST00000552801 ATP2A1O14983 1001 aa10.29□□□□□ -0.76
TMEM116-217ENST00000552801 ASGR1P07306 291 aa10.29□□□□□ -0.76
TMEM116-217ENST00000552801 ALAS1P13196 640 aa10.29□□□□□ -0.76
TMEM116-217ENST00000552801 PPARAQ07869 468 aa10.29□□□□□ -0.76
TMEM116-217ENST00000552801 CCDC96Q2M329 555 aa10.29□□□□□ -0.76
TMEM116-217ENST00000552801 TKFCQ3LXA3 575 aa10.29□□□□□ -0.76
TMEM116-217ENST00000552801 CCDC144BQ3MJ40 725 aa10.29□□□□□ -0.76
TMEM116-217ENST00000552801 C20orf194Q5TEA3 1177 aa10.29□□□□□ -0.76
TMEM116-217ENST00000552801 ARMCX2Q7L311 632 aa10.29□□□□□ -0.76
TMEM116-217ENST00000552801 ANKRD33Q7Z3H0 272 aa10.29□□□□□ -0.76
TMEM116-217ENST00000552801 OXER1Q8TDS5 423 aa10.29□□□□□ -0.76
TMEM116-217ENST00000552801 MYLIPQ8WY64 445 aa10.29□□□□□ -0.76
TMEM116-217ENST00000552801 MPHOSPH6Q99547 160 aaKnown RBP10.29□□□□□ -0.76
TMEM116-217ENST00000552801 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.29□□□□□ -0.76
TMEM116-217ENST00000552801 RIPK3Q9Y572 518 aa10.29□□□□□ -0.76
TMEM116-217ENST00000552801 GREB1LQ9C091 1923 aaPredicted RBP10.29□□□□□ -0.76
TMEM116-217ENST00000552801 MCM3APO60318 1980 aa10.28□□□□□ -0.76
TMEM116-217ENST00000552801 POTEMA6NI47 508 aa10.28□□□□□ -0.76
TMEM116-217ENST00000552801 RANBP6O60518 1105 aaKnown RBP10.28□□□□□ -0.76
TMEM116-217ENST00000552801 ADAMTS4O75173 837 aa10.28□□□□□ -0.76
TMEM116-217ENST00000552801 SNAI1O95863 264 aaPredicted RBP10.28□□□□□ -0.76
TMEM116-217ENST00000552801 TIMP1P01033 207 aa10.28□□□□□ -0.76
TMEM116-217ENST00000552801 TNFAIP2Q03169 654 aa10.28□□□□□ -0.76
TMEM116-217ENST00000552801 FAAP100Q0VG06 881 aa10.28□□□□□ -0.76
TMEM116-217ENST00000552801 POTEGQ6S5H5 508 aa10.28□□□□□ -0.76
TMEM116-217ENST00000552801 CCDC144CPQ8IYA2 1237 aa10.28□□□□□ -0.76
TMEM116-217ENST00000552801 NEDD1Q8NHV4 660 aa10.28□□□□□ -0.76
TMEM116-217ENST00000552801 STAG1Q8WVM7 1258 aa10.28□□□□□ -0.76
TMEM116-217ENST00000552801 SYMPKQ92797 1274 aaKnown RBP10.28□□□□□ -0.76
TMEM116-217ENST00000552801 KHSRPQ92945 711 aaKnown RBP eCLIP10.28□□□□□ -0.768e-7■■□□□ 12.4
TMEM116-217ENST00000552801 MKL1Q969V6 931 aa10.28□□□□□ -0.76
TMEM116-217ENST00000552801 TRERF1Q96PN7 1200 aa10.28□□□□□ -0.76
TMEM116-217ENST00000552801 GAS2L1Q99501 681 aaPredicted RBP10.28□□□□□ -0.76
TMEM116-217ENST00000552801 PPP1R12CQ9BZL4 782 aa10.28□□□□□ -0.76
TMEM116-217ENST00000552801 RNF146Q9NTX7 359 aa10.28□□□□□ -0.76
TMEM116-217ENST00000552801 DNAJC25-GNG10A0A024R161 153 aa10.27□□□□□ -0.76
TMEM116-217ENST00000552801 ARVCFO00192 962 aa10.27□□□□□ -0.76
TMEM116-217ENST00000552801 CABYRO75952 493 aa10.27□□□□□ -0.76
TMEM116-217ENST00000552801 MX1P20591 662 aa10.27□□□□□ -0.76
TMEM116-217ENST00000552801 MCCP23508 829 aa10.27□□□□□ -0.76
TMEM116-217ENST00000552801 CST5P28325 142 aaPredicted RBP10.27□□□□□ -0.76
TMEM116-217ENST00000552801 E2F4Q16254 413 aa10.27□□□□□ -0.76
TMEM116-217ENST00000552801 MFSD5Q6N075 450 aa10.27□□□□□ -0.76
TMEM116-217ENST00000552801 PSRC1Q6PGN9 363 aaPredicted RBP10.27□□□□□ -0.76
TMEM116-217ENST00000552801 KLHDC9Q8NEP7 349 aa10.27□□□□□ -0.76
TMEM116-217ENST00000552801 IL27Q8NEV9 243 aa10.27□□□□□ -0.76
TMEM116-217ENST00000552801 COL25A1Q9BXS0 654 aaPredicted RBP10.27□□□□□ -0.76
TMEM116-217ENST00000552801 EPB41L4AQ9HCS5 686 aaPredicted RBP10.27□□□□□ -0.76
TMEM116-217ENST00000552801 MSRAQ9UJ68 235 aa10.27□□□□□ -0.76
TMEM116-217ENST00000552801 CCPG1Q9ULG6 757 aa10.27□□□□□ -0.76
TMEM116-217ENST00000552801 DNAH12Q6ZR08 3092 aa10.27□□□□□ -0.77
TMEM116-217ENST00000552801 IGKV6D-41A0A0C4DH26 115 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 NUDT7P0C024 238 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 DNAJB2P25686 324 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 GJA9P57773 515 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 CAMK2BQ13554 666 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 BRDTQ58F21 947 aaPredicted RBP10.26□□□□□ -0.77
TMEM116-217ENST00000552801 RRP12Q5JTH9 1297 aaKnown RBP10.26□□□□□ -0.77
TMEM116-217ENST00000552801 NSMFQ6X4W1 530 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 KCTD1Q719H9 257 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 TLK2Q86UE8 772 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 TIFAQ96CG3 184 aa10.26□□□□□ -0.77
TMEM116-217ENST00000552801 GMCL1Q96IK5 515 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms