RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 MTMR2Q13614 643 aa14.45□□□□□ -0.1
CACNB3-223ENST00000552480 UBE2SQ16763 222 aa14.45□□□□□ -0.1
CACNB3-223ENST00000552480 KRT26Q7Z3Y9 468 aa14.45□□□□□ -0.1
CACNB3-223ENST00000552480 ZNF280CQ8ND82 737 aa14.45□□□□□ -0.1
CACNB3-223ENST00000552480 KIFC2Q96AC6 838 aa14.45□□□□□ -0.1
CACNB3-223ENST00000552480 CSRNP2Q9H175 543 aa14.45□□□□□ -0.1
CACNB3-223ENST00000552480 USP2O75604 605 aaPredicted RBP14.44□□□□□ -0.1
CACNB3-223ENST00000552480 CCDC192P0DO97 292 aa14.44□□□□□ -0.1
CACNB3-223ENST00000552480 PRPHP41219 470 aa14.44□□□□□ -0.1
CACNB3-223ENST00000552480 BACE1P56817 501 aa14.44□□□□□ -0.1
CACNB3-223ENST00000552480 AP3B2Q13367 1082 aa14.44□□□□□ -0.1
CACNB3-223ENST00000552480 LETM2Q2VYF4 491 aa14.44□□□□□ -0.1
CACNB3-223ENST00000552480 USH1GQ495M9 461 aa14.44□□□□□ -0.1
CACNB3-223ENST00000552480 CKAP2LQ8IYA6 745 aa14.44□□□□□ -0.1
CACNB3-223ENST00000552480 C12orf42Q96LP6 360 aa14.44□□□□□ -0.1
CACNB3-223ENST00000552480 SLF1Q9BQI6 1058 aa14.44□□□□□ -0.1
CACNB3-223ENST00000552480 EMILIN3Q9NT22 766 aa14.44□□□□□ -0.1
CACNB3-223ENST00000552480 KCNH3Q9ULD8 1083 aa14.44□□□□□ -0.1
CACNB3-223ENST00000552480 FZD1Q9UP38 647 aa14.44□□□□□ -0.1
CACNB3-223ENST00000552480 OTOFQ9HC10 1997 aa14.43□□□□□ -0.1
CACNB3-223ENST00000552480 C19orf81C9J6K1 198 aa14.43□□□□□ -0.1
CACNB3-223ENST00000552480 CCNT1O60563 726 aaKnown RBP14.43□□□□□ -0.1
CACNB3-223ENST00000552480 VCAM1P19320 739 aa14.43□□□□□ -0.1
CACNB3-223ENST00000552480 LONP1P36776 959 aaKnown RBP14.43□□□□□ -0.1
CACNB3-223ENST00000552480 MAP3K9P80192 1104 aa14.43□□□□□ -0.1
CACNB3-223ENST00000552480 SPP2Q13103 211 aa14.43□□□□□ -0.1
CACNB3-223ENST00000552480 SPECC1Q5M775 1068 aa14.43□□□□□ -0.1
CACNB3-223ENST00000552480 PRPF38AQ8NAV1 312 aaKnown RBP14.43□□□□□ -0.1
CACNB3-223ENST00000552480 NAP1L4Q99733 375 aaKnown RBP14.43□□□□□ -0.1
CACNB3-223ENST00000552480 RBSNQ9H1K0 784 aa14.43□□□□□ -0.1
CACNB3-223ENST00000552480 TAF1DQ9H5J8 278 aaPredicted RBP14.43□□□□□ -0.1
CACNB3-223ENST00000552480 FBXO28Q9NVF7 368 aa14.43□□□□□ -0.1
CACNB3-223ENST00000552480 ZHX2Q9Y6X8 837 aa14.43□□□□□ -0.1
CACNB3-223ENST00000552480 POLR2AP24928 1970 aaKnown RBP14.43□□□□□ -0.1
CACNB3-223ENST00000552480 ABCB11O95342 1321 aa14.42□□□□□ -0.1
CACNB3-223ENST00000552480 VWA3AA6NCI4 1184 aa14.42□□□□□ -0.1
CACNB3-223ENST00000552480 MEIS2O14770 477 aa14.42□□□□□ -0.1
CACNB3-223ENST00000552480 PPP1R12BO60237 982 aaPredicted RBP14.42□□□□□ -0.1
CACNB3-223ENST00000552480 NEMFO60524 1076 aa14.42□□□□□ -0.1
CACNB3-223ENST00000552480 FOSP01100 380 aaPredicted RBP14.42□□□□□ -0.1
CACNB3-223ENST00000552480 NF2P35240 595 aa14.42□□□□□ -0.1
CACNB3-223ENST00000552480 IREB2P48200 963 aaKnown RBP14.42□□□□□ -0.1
CACNB3-223ENST00000552480 TYRO3Q06418 890 aa14.42□□□□□ -0.1
CACNB3-223ENST00000552480 CCDC174Q6PII3 467 aa14.42□□□□□ -0.1
CACNB3-223ENST00000552480 SASS6Q6UVJ0 657 aa14.42□□□□□ -0.1
CACNB3-223ENST00000552480 PNMA8AQ86V59 439 aaPredicted RBP14.42□□□□□ -0.1
CACNB3-223ENST00000552480 ELOA2Q8IYF1 753 aaPredicted RBP14.42□□□□□ -0.1
CACNB3-223ENST00000552480 CDCA5Q96FF9 252 aa14.42□□□□□ -0.1
CACNB3-223ENST00000552480 SDF4Q9BRK5 362 aa14.42□□□□□ -0.1
CACNB3-223ENST00000552480 ANO3Q9BYT9 981 aa14.42□□□□□ -0.1
CACNB3-223ENST00000552480 TANGO6Q9C0B7 1094 aa14.42□□□□□ -0.1
CACNB3-223ENST00000552480 RPAP3Q9H6T3 665 aaPredicted RBP14.42□□□□□ -0.1
CACNB3-223ENST00000552480 MRPL11Q9Y3B7 192 aaKnown RBP14.42□□□□□ -0.1
CACNB3-223ENST00000552480 SNCAIPQ9Y6H5 919 aa14.42□□□□□ -0.1
CACNB3-223ENST00000552480 POTECB2RU33 542 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 USP17L15C9J2P7 530 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 USP17L13C9JLJ4 530 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 USP17L11C9JVI0 530 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 USP17L18D6R9N7 530 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 USP17L22D6RA61 530 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 USP17L17D6RBQ6 530 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 USP17L19D6RCP7 530 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 USP17L20D6RJB6 530 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 PIK3CDO00329 1044 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 OPLAHO14841 1288 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 ICAM1P05362 532 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 OR52Z1P0C646 297 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 FDX1P10109 184 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 XRCC6P12956 609 aaKnown RBP eCLIP14.41□□□□□ -0.1
CACNB3-223ENST00000552480 GCFC2P16383 781 aaKnown RBP14.41□□□□□ -0.1
CACNB3-223ENST00000552480 USP17L24Q0WX57 530 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 DGKZQ13574 1117 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 PRKG1Q13976 671 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 VGLL4Q14135 290 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 IL17AQ16552 155 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 PPP4R3AQ6IN85 833 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 USP17L6PQ6QN14 398 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 DTHD1Q6ZMT9 781 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 KRBA2Q6ZNG9 492 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.41□□□□□ -0.1
CACNB3-223ENST00000552480 SYMPKQ92797 1274 aaKnown RBP14.41□□□□□ -0.1
CACNB3-223ENST00000552480 TMEM60Q9H2L4 133 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 PPP1R9AQ9ULJ8 1098 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 AFG3L2Q9Y4W6 797 aa14.41□□□□□ -0.1
CACNB3-223ENST00000552480 EDIL3O43854 480 aa14.4□□□□□ -0.1
CACNB3-223ENST00000552480 FLOT1O75955 427 aa14.4□□□□□ -0.1
CACNB3-223ENST00000552480 TAL1P17542 331 aaPredicted RBP14.4□□□□□ -0.1
CACNB3-223ENST00000552480 EAPPQ56P03 285 aaPredicted RBP14.4□□□□□ -0.1
CACNB3-223ENST00000552480 SH3D19Q5HYK7 790 aa14.4□□□□□ -0.1
CACNB3-223ENST00000552480 DLK2Q6UY11 383 aa14.4□□□□□ -0.1
CACNB3-223ENST00000552480 LDHDQ86WU2 507 aa14.4□□□□□ -0.1
CACNB3-223ENST00000552480 CNNM3Q8NE01 707 aa14.4□□□□□ -0.1
CACNB3-223ENST00000552480 RBM46Q8TBY0 533 aaKnown RBP14.4□□□□□ -0.1
CACNB3-223ENST00000552480 PYM1Q9BRP8 204 aaKnown RBP14.4□□□□□ -0.1
CACNB3-223ENST00000552480 TMOD4Q9NZQ9 345 aa14.4□□□□□ -0.1
CACNB3-223ENST00000552480 USP25Q9UHP3 1055 aa14.4□□□□□ -0.1
CACNB3-223ENST00000552480 PNMA2Q9UL42 364 aa14.4□□□□□ -0.1
CACNB3-223ENST00000552480 CSADQ9Y600 493 aa14.4□□□□□ -0.1
CACNB3-223ENST00000552480 PARP14Q460N5 1801 aa14.4□□□□□ -0.1
CACNB3-223ENST00000552480 GOLGB1Q14789 3259 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms