RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 FAM161BQ96MY7 647 aa6.46□□□□□ -1.38
USP44-207ENST00000552237 SLC6A18Q96N87 628 aa6.46□□□□□ -1.38
USP44-207ENST00000552237 MRS2Q9HD23 443 aa6.46□□□□□ -1.38
USP44-207ENST00000552237 PDLIM7Q9NR12 457 aa6.46□□□□□ -1.38
USP44-207ENST00000552237 NOBOXO60393 691 aa6.45□□□□□ -1.38
USP44-207ENST00000552237 FBLN1P23142 703 aa6.45□□□□□ -1.38
USP44-207ENST00000552237 TACR1P25103 407 aa6.45□□□□□ -1.38
USP44-207ENST00000552237 CEBPAP49715 358 aaPredicted RBP6.45□□□□□ -1.38
USP44-207ENST00000552237 AUHQ13825 339 aaKnown RBP6.45□□□□□ -1.38
USP44-207ENST00000552237 TMC4Q7Z404 712 aa6.45□□□□□ -1.38
USP44-207ENST00000552237 PRR13Q9NZ81 148 aa6.45□□□□□ -1.38
USP44-207ENST00000552237 NTMQ9P121 344 aa6.45□□□□□ -1.38
USP44-207ENST00000552237 PLA2G2DQ9UNK4 145 aa6.45□□□□□ -1.38
USP44-207ENST00000552237 ROBO2Q9HCK4 1378 aa6.44□□□□□ -1.38
USP44-207ENST00000552237 ATE1O95260 518 aa6.44□□□□□ -1.38
USP44-207ENST00000552237 RTP2Q5QGT7 225 aa6.44□□□□□ -1.38
USP44-207ENST00000552237 CHST13Q8NET6 341 aa6.44□□□□□ -1.38
USP44-207ENST00000552237 C8orf49Q96NF6 230 aa6.44□□□□□ -1.38
USP44-207ENST00000552237 VTI1BQ9UEU0 232 aa6.44□□□□□ -1.38
USP44-207ENST00000552237 SUPT16HQ9Y5B9 1047 aaKnown RBP6.44□□□□□ -1.38
USP44-207ENST00000552237 SORBS3O60504 671 aa6.43□□□□□ -1.38
USP44-207ENST00000552237 ASGR2P07307 311 aa6.43□□□□□ -1.38
USP44-207ENST00000552237 SARSP49591 514 aaKnown RBP6.43□□□□□ -1.38
USP44-207ENST00000552237 HMGA2P52926 109 aa6.43□□□□□ -1.38
USP44-207ENST00000552237 B3GNT8Q7Z7M8 397 aa6.43□□□□□ -1.38
USP44-207ENST00000552237 CABP7Q86V35 215 aa6.43□□□□□ -1.38
USP44-207ENST00000552237 TMEM192Q8IY95 271 aa6.43□□□□□ -1.38
USP44-207ENST00000552237 SLC12A9Q9BXP2 914 aa6.43□□□□□ -1.38
USP44-207ENST00000552237 LRRC3Q9BY71 257 aa6.43□□□□□ -1.38
USP44-207ENST00000552237 OVOL3O00110 214 aa6.42□□□□□ -1.38
USP44-207ENST00000552237 ZNF20P17024 532 aa6.42□□□□□ -1.38
USP44-207ENST00000552237 GARTP22102 1010 aa6.42□□□□□ -1.38
USP44-207ENST00000552237 GDF5P43026 501 aa6.42□□□□□ -1.38
USP44-207ENST00000552237 FBXL19Q6PCT2 694 aa6.42□□□□□ -1.38
USP44-207ENST00000552237 GK5Q6ZS86 529 aa6.42□□□□□ -1.38
USP44-207ENST00000552237 TTLL7Q6ZT98 887 aa6.42□□□□□ -1.38
USP44-207ENST00000552237 CCDC144CPQ8IYA2 1237 aa6.42□□□□□ -1.38
USP44-207ENST00000552237 TTC9BQ8N6N2 239 aa6.42□□□□□ -1.38
USP44-207ENST00000552237 SORCS2Q96PQ0 1159 aa6.42□□□□□ -1.38
USP44-207ENST00000552237 KBTBD4Q9NVX7 518 aa6.42□□□□□ -1.38
USP44-207ENST00000552237 NME1P15531 152 aaKnown RBP6.41□□□□□ -1.38
USP44-207ENST00000552237 MCM4P33991 863 aa6.41□□□□□ -1.38
USP44-207ENST00000552237 CORO7P57737 925 aa6.41□□□□□ -1.38
USP44-207ENST00000552237 DLX2Q07687 328 aaPredicted RBP6.41□□□□□ -1.38
USP44-207ENST00000552237 SAMD11Q96NU1 681 aa6.41□□□□□ -1.38
USP44-207ENST00000552237 GZF1Q9H116 711 aaPredicted RBP6.41□□□□□ -1.38
USP44-207ENST00000552237 C1QTNF3-AMACRE9PGA6 284 aa6.4□□□□□ -1.38
USP44-207ENST00000552237 SMARCA5O60264 1052 aaPredicted RBP6.4□□□□□ -1.38
USP44-207ENST00000552237 TBC1D8O95759 1140 aa6.4□□□□□ -1.38
USP44-207ENST00000552237 C6P13671 934 aa6.4□□□□□ -1.38
USP44-207ENST00000552237 PMLP29590 882 aa6.4□□□□□ -1.38
USP44-207ENST00000552237 NOP2P46087 812 aaKnown RBP6.4□□□□□ -1.38
USP44-207ENST00000552237 LRRFIP1Q32MZ4 808 aaKnown RBP6.4□□□□□ -1.38
USP44-207ENST00000552237 NOL9Q5SY16 702 aaKnown RBP6.4□□□□□ -1.38
USP44-207ENST00000552237 ZNF761Q86XN6 746 aaPredicted RBP6.4□□□□□ -1.38
USP44-207ENST00000552237 C7orf61Q8IZ16 206 aa6.4□□□□□ -1.38
USP44-207ENST00000552237 SMARCC2Q8TAQ2 1214 aa6.4□□□□□ -1.38
USP44-207ENST00000552237 DHRS1Q96LJ7 313 aa6.4□□□□□ -1.38
USP44-207ENST00000552237 RBM15Q96T37 977 aaKnown RBP eCLIP6.4□□□□□ -1.38
USP44-207ENST00000552237 EHMT1Q9H9B1 1298 aa6.4□□□□□ -1.38
USP44-207ENST00000552237 FAM86C2PA6NEL3 165 aa6.39□□□□□ -1.39
USP44-207ENST00000552237 H0Y8X5 98 aa6.39□□□□□ -1.39
USP44-207ENST00000552237 FGF10O15520 208 aaPredicted RBP6.39□□□□□ -1.39
USP44-207ENST00000552237 PLATP00750 562 aa6.39□□□□□ -1.39
USP44-207ENST00000552237 ITGAEP38570 1179 aa6.39□□□□□ -1.39
USP44-207ENST00000552237 EIF4A3P38919 411 aaKnown RBP6.39□□□□□ -1.39
USP44-207ENST00000552237 SEZ6Q53EL9 994 aa6.39□□□□□ -1.39
USP44-207ENST00000552237 SND1Q7KZF4 910 aaKnown RBP eCLIP6.39□□□□□ -1.39
USP44-207ENST00000552237 ZBTB8AQ96BR9 441 aa6.39□□□□□ -1.39
USP44-207ENST00000552237 BCAS3Q9H6U6 928 aa6.39□□□□□ -1.39
USP44-207ENST00000552237 RXFP1Q9HBX9 757 aa6.39□□□□□ -1.39
USP44-207ENST00000552237 NUDT5Q9UKK9 219 aa6.39□□□□□ -1.39
USP44-207ENST00000552237 ZBTB7CA1YPR0 619 aa6.38□□□□□ -1.39
USP44-207ENST00000552237 TACR2P21452 398 aa6.38□□□□□ -1.39
USP44-207ENST00000552237 L1CAMP32004 1257 aa6.38□□□□□ -1.39
USP44-207ENST00000552237 CLCQ05315 142 aa6.38□□□□□ -1.39
USP44-207ENST00000552237 C1QTNF3Q9BXJ4 246 aa6.38□□□□□ -1.39
USP44-207ENST00000552237 SCAND2PQ9GZW5 306 aaPredicted RBP6.38□□□□□ -1.39
USP44-207ENST00000552237 SUCOQ9UBS9 1254 aaKnown RBP6.38□□□□□ -1.39
USP44-207ENST00000552237 ZNF536O15090 1300 aa6.38□□□□□ -1.39
USP44-207ENST00000552237 TNFRSF10CO14798 259 aa6.37□□□□□ -1.39
USP44-207ENST00000552237 ZNF165P49910 485 aa6.37□□□□□ -1.39
USP44-207ENST00000552237 FAM124AQ86V42 546 aa6.37□□□□□ -1.39
USP44-207ENST00000552237 ADAMTS17Q8TE56 1095 aa6.37□□□□□ -1.39
USP44-207ENST00000552237 DVL3Q92997 716 aaPredicted RBP6.37□□□□□ -1.39
USP44-207ENST00000552237 KISS1RQ969F8 398 aaPredicted RBP6.37□□□□□ -1.39
USP44-207ENST00000552237 TSPAN17Q96FV3 270 aa6.37□□□□□ -1.39
USP44-207ENST00000552237 PTCHD1Q96NR3 888 aa6.37□□□□□ -1.39
USP44-207ENST00000552237 MRIQ9BWK5 157 aa6.37□□□□□ -1.39
USP44-207ENST00000552237 KRTAP3-1Q9BYR8 98 aa6.37□□□□□ -1.39
USP44-207ENST00000552237 CRKP46108 304 aa6.36□□□□□ -1.39
USP44-207ENST00000552237 APOBRQ0VD83 1088 aa6.36□□□□□ -1.39
USP44-207ENST00000552237 KIAA2012Q0VF49 1180 aa6.36□□□□□ -1.39
USP44-207ENST00000552237 SMAD4Q13485 552 aaKnown RBP6.36□□□□□ -1.39
USP44-207ENST00000552237 TBC1D10BQ4KMP7 808 aaPredicted RBP6.36□□□□□ -1.39
USP44-207ENST00000552237 BORAQ6PGQ7 559 aa6.36□□□□□ -1.39
USP44-207ENST00000552237 GLB1LQ6UWU2 654 aa6.36□□□□□ -1.39
USP44-207ENST00000552237 USP51Q70EK9 711 aa6.36□□□□□ -1.39
USP44-207ENST00000552237 REXO1Q8N1G1 1221 aaKnown RBP6.36□□□□□ -1.39
USP44-207ENST00000552237 SH3RF3Q8TEJ3 882 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms