RNA–Protein interactions for RNA: ENST00000552197.5

SLC38A1-210, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC38A1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-210ENST00000552197 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.59□□□□□ -0.39
SLC38A1-210ENST00000552197 LPAR1Q92633 364 aa12.59□□□□□ -0.39
SLC38A1-210ENST00000552197 PANK2Q9BZ23 570 aa12.59□□□□□ -0.39
SLC38A1-210ENST00000552197 CLEC11AQ9Y240 323 aa12.59□□□□□ -0.39
SLC38A1-210ENST00000552197 ZC3H4Q9UPT8 1303 aaKnown RBP12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 IQCA1LA6NCM1 817 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 WDR46O15213 610 aaKnown RBP12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 ZNF202O95125 648 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 BMP15O95972 392 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 VCAM1P19320 739 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 HMGCS2P54868 508 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 BACE1P56817 501 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 TTLL12Q14166 644 aaPredicted RBP12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 MOB2Q70IA6 237 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 NEK8Q86SG6 692 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 FAM160B2Q86V87 743 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 ERCC4Q92889 916 aaPredicted RBP12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 FLOT1O75955 427 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 POTEIP0CG38 1075 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 POTEJP0CG39 1038 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 SYKP43405 635 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 USP14P54578 494 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 ATP2C1P98194 919 aaPredicted RBP12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 VGLL4Q14135 290 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 USP49Q70CQ1 688 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 ZC3H15Q8WU90 426 aaKnown RBP12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 CDCA5Q96FF9 252 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 SDF4Q9BRK5 362 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 WDR18Q9BV38 432 aa12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 RPAP3Q9H6T3 665 aaPredicted RBP12.58□□□□□ -0.4
SLC38A1-210ENST00000552197 MAP3K9P80192 1104 aa12.57□□□□□ -0.4
SLC38A1-210ENST00000552197 CNKSR2Q8WXI2 1034 aa12.57□□□□□ -0.4
SLC38A1-210ENST00000552197 TMEM60Q9H2L4 133 aa12.57□□□□□ -0.4
SLC38A1-210ENST00000552197 RANBP17Q9H2T7 1088 aaKnown RBP12.57□□□□□ -0.4
SLC38A1-210ENST00000552197 TSPY26PQ9H489 355 aa12.57□□□□□ -0.4
SLC38A1-210ENST00000552197 GRPEL1Q9HAV7 217 aa12.57□□□□□ -0.4
SLC38A1-210ENST00000552197 SCN4AP35499 1836 aa12.57□□□□□ -0.4
SLC38A1-210ENST00000552197 HOXA13P31271 388 aaPredicted RBP12.57□□□□□ -0.4
SLC38A1-210ENST00000552197 CLK2P49760 499 aaKnown RBP12.57□□□□□ -0.4
SLC38A1-210ENST00000552197 PDILTQ8N807 584 aa12.57□□□□□ -0.4
SLC38A1-210ENST00000552197 RNF214Q8ND24 703 aa12.57□□□□□ -0.4
SLC38A1-210ENST00000552197 EPSTI1Q96J88 318 aa12.57□□□□□ -0.4
SLC38A1-210ENST00000552197 SLF1Q9BQI6 1058 aa12.57□□□□□ -0.4
SLC38A1-210ENST00000552197 RBSNQ9H1K0 784 aa12.57□□□□□ -0.4
SLC38A1-210ENST00000552197 FAM13BQ9NYF5 915 aa12.57□□□□□ -0.4
SLC38A1-210ENST00000552197 KCNH3Q9ULD8 1083 aa12.57□□□□□ -0.4
SLC38A1-210ENST00000552197 MEIS2O14770 477 aa12.56□□□□□ -0.4
SLC38A1-210ENST00000552197 PLA2G6O60733 806 aa12.56□□□□□ -0.4
SLC38A1-210ENST00000552197 IL17AQ16552 155 aa12.56□□□□□ -0.4
SLC38A1-210ENST00000552197 CPXCR1Q8N123 301 aa12.56□□□□□ -0.4
SLC38A1-210ENST00000552197 C4orf32Q8N8J7 132 aa12.56□□□□□ -0.4
SLC38A1-210ENST00000552197 PRPF38AQ8NAV1 312 aaKnown RBP12.56□□□□□ -0.4
SLC38A1-210ENST00000552197 FERMT2Q96AC1 680 aa12.56□□□□□ -0.4
SLC38A1-210ENST00000552197 HPSEQ9Y251 543 aa12.56□□□□□ -0.4
SLC38A1-210ENST00000552197 CSADQ9Y600 493 aa12.56□□□□□ -0.4
SLC38A1-210ENST00000552197 SNCAIPQ9Y6H5 919 aa12.56□□□□□ -0.4
SLC38A1-210ENST00000552197 MYH7BA7E2Y1 1941 aa12.56□□□□□ -0.4
SLC38A1-210ENST00000552197 PHIPQ8WWQ0 1821 aa12.56□□□□□ -0.4
SLC38A1-210ENST00000552197 OPLAHO14841 1288 aa12.56□□□□□ -0.4
SLC38A1-210ENST00000552197 NF2P35240 595 aa12.56□□□□□ -0.4
SLC38A1-210ENST00000552197 ZNF579Q8NAF0 562 aaKnown RBP12.56□□□□□ -0.4
SLC38A1-210ENST00000552197 TBC1D5Q92609 795 aa12.56□□□□□ -0.4
SLC38A1-210ENST00000552197 AGBL1Q96MI9 1066 aa12.56□□□□□ -0.4
SLC38A1-210ENST00000552197 POLR2DO15514 142 aaKnown RBP12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 TDP2O95551 362 aa12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 CFBP00751 764 aa12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 CDC25AP30304 524 aa12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 IREB2P48200 963 aaKnown RBP12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 NOL9Q5SY16 702 aaKnown RBP12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 MAP1SQ66K74 1059 aaPredicted RBP12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 PNMA8AQ86V59 439 aaPredicted RBP12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 LDHDQ86WU2 507 aa12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 SYMPKQ92797 1274 aaKnown RBP12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 CLMNQ96JQ2 1002 aa12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 GLT8D2Q9H1C3 349 aa12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 ELP3Q9H9T3 547 aa12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 AFG3L2Q9Y4W6 797 aa12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 EDIL3O43854 480 aa12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 NEMFO60524 1076 aa12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 XRCC6P12956 609 aaKnown RBP eCLIP12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 FMR1Q06787 632 aaKnown RBP eCLIP12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 LONRF3Q496Y0 759 aa12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 FCHSD1Q86WN1 690 aa12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 P2RX7Q99572 595 aaKnown RBP12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 ZNF408Q9H9D4 720 aa12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 RRAGCQ9HB90 399 aa12.55□□□□□ -0.4
SLC38A1-210ENST00000552197 C19orf81C9J6K1 198 aa12.54□□□□□ -0.4
SLC38A1-210ENST00000552197 MRE11P49959 708 aa12.54□□□□□ -0.4
SLC38A1-210ENST00000552197 L1TD1Q5T7N2 865 aaKnown RBP12.54□□□□□ -0.4
SLC38A1-210ENST00000552197 DTHD1Q6ZMT9 781 aa12.54□□□□□ -0.4
SLC38A1-210ENST00000552197 POTEDQ86YR6 584 aa12.54□□□□□ -0.4
SLC38A1-210ENST00000552197 ANO3Q9BYT9 981 aa12.54□□□□□ -0.4
SLC38A1-210ENST00000552197 RAVER2Q9HCJ3 691 aaKnown RBP12.54□□□□□ -0.4
SLC38A1-210ENST00000552197 TMOD4Q9NZQ9 345 aa12.54□□□□□ -0.4
SLC38A1-210ENST00000552197 CCPG1Q9ULG6 757 aa12.54□□□□□ -0.4
SLC38A1-210ENST00000552197 OTOFQ9HC10 1997 aa12.54□□□□□ -0.4
SLC38A1-210ENST00000552197 A0A087WWV3 80 aa12.54□□□□□ -0.4
SLC38A1-210ENST00000552197 FAM237AA0A1B0GTK4 181 aa12.54□□□□□ -0.4
SLC38A1-210ENST00000552197 TRAF5O00463 557 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms