RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 NCOA7Q8NI08 942 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 TRIB2Q92519 343 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 GMCL1Q96IK5 515 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 DEFB118Q96PH6 123 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 ZSCAN10Q96SZ4 725 aaPredicted RBP6.92□□□□□ -1.3
CCDC65-204ENST00000552188 TMEM47Q9BQJ4 181 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 TEX13BQ9BXU2 312 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 RAVER2Q9HCJ3 691 aaKnown RBP6.92□□□□□ -1.3
CCDC65-204ENST00000552188 ANO2Q9NQ90 1003 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 NPDC1Q9NQX5 325 aaPredicted RBP6.92□□□□□ -1.3
CCDC65-204ENST00000552188 FBXO40Q9UH90 709 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 NEDD4P46934 1319 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 MCM3APO60318 1980 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 CDC45O75419 566 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 ALAS1P13196 640 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 GJA8P48165 433 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 OAZ1P54368 228 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 PTH1RQ03431 593 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 CACNB2Q08289 660 aaPredicted RBP6.91□□□□□ -1.3
CCDC65-204ENST00000552188 BMP2KLQ5H9B9 411 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 IFIT1BQ5T764 474 aaKnown RBP6.91□□□□□ -1.3
CCDC65-204ENST00000552188 SYDE2Q5VT97 1194 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 RNF20Q5VTR2 975 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 ERICH6BQ5W0A0 696 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 DGKHQ86XP1 1220 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 ABRAQ8N0Z2 381 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 ZNF687Q8N1G0 1237 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 PNMA1Q8ND90 353 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 U2AF1L4Q8WU68 220 aaKnown RBP6.91□□□□□ -1.3
CCDC65-204ENST00000552188 ESYT1Q9BSJ8 1104 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 SLC38A10Q9HBR0 1119 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 PLSCR2Q9NRY7 297 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 HOMER2Q9NSB8 354 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 PPP4R2Q9NY27 417 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 ZSWIM5Q9P217 1185 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 ADAMTS5Q9UNA0 930 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 RBM8AQ9Y5S9 174 aaKnown RBP6.91□□□□□ -1.3
CCDC65-204ENST00000552188 TACC3Q9Y6A5 838 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 TNKSO95271 1327 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 FRMPD2Q68DX3 1309 aaPredicted RBP6.91□□□□□ -1.3
CCDC65-204ENST00000552188 SMCHD1A6NHR9 2005 aa6.91□□□□□ -1.3
CCDC65-204ENST00000552188 E7EWF7 191 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 IFIT3O14879 490 aaKnown RBP6.9□□□□□ -1.3
CCDC65-204ENST00000552188 PLA2G6O60733 806 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 ZMYND10O75800 440 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 FARP2O94887 1054 aaPredicted RBP6.9□□□□□ -1.3
CCDC65-204ENST00000552188 CYP21A2P08686 494 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 HOXC6P09630 235 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 PARP1P09874 1014 aaKnown RBP6.9□□□□□ -1.3
CCDC65-204ENST00000552188 CYP2C19P33261 490 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 SLC16A2P36021 539 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 TRIM32Q13049 653 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 TKFCQ3LXA3 575 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 GPATCH4Q5T3I0 446 aaKnown RBP6.9□□□□□ -1.3
CCDC65-204ENST00000552188 DMRTA1Q5VZB9 504 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 SKAP1Q86WV1 359 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 KRI1Q8N9T8 703 aaKnown RBP6.9□□□□□ -1.3
CCDC65-204ENST00000552188 CHST13Q8NET6 341 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 NPLOC4Q8TAT6 608 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 USP6NLQ92738 828 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 DPF3Q92784 378 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 MAP4K1Q92918 833 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 TRERF1Q96PN7 1200 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 HTATIP2Q9BUP3 242 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 NBPF3Q9H094 633 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 IL25Q9H293 177 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 ACAD9Q9H845 621 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 PNMA2Q9UL42 364 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 ZNF214Q9UL59 606 aaPredicted RBP6.9□□□□□ -1.3
CCDC65-204ENST00000552188 CCPG1Q9ULG6 757 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 PRR12Q9ULL5 1215 aa6.9□□□□□ -1.3
CCDC65-204ENST00000552188 KIAA0100Q14667 2235 aaKnown RBP6.9□□□□□ -1.3
CCDC65-204ENST00000552188 ARHGAP33O14559 1287 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 ATP2A1O14983 1001 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 MSCO60682 206 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 COBLO75128 1261 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 PGK2P07205 417 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 GOLGA8HP0CJ92 632 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 PDHBP11177 359 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 CCND3P30281 292 aaPredicted RBP6.89□□□□□ -1.31
CCDC65-204ENST00000552188 SNAP25P60880 206 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 ZNF543Q08ER8 600 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 HIC1Q14526 733 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 WTAPQ15007 396 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 ASPRV1Q53RT3 343 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 TMEM67Q5HYA8 995 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 OLFML2BQ68BL8 750 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 TTBK2Q6IQ55 1244 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 NFXL1Q6ZNB6 911 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 NECAB2Q7Z6G3 386 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 ANKLE1Q8NAG6 615 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 REPS2Q8NFH8 660 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 MAML3Q96JK9 1138 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 AGBL1Q96MI9 1066 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 MPHOSPH6Q99547 160 aaKnown RBP6.89□□□□□ -1.31
CCDC65-204ENST00000552188 TINF2Q9BSI4 451 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 SLC24A3Q9HC58 644 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 VAT1LQ9HCJ6 419 aa6.89□□□□□ -1.31
CCDC65-204ENST00000552188 PAK6Q9NQU5 681 aaPredicted RBP6.89□□□□□ -1.31
CCDC65-204ENST00000552188 RNF146Q9NTX7 359 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms