RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 CCPG1Q9ULG6 757 aa11.92□□□□□ -0.5
NEK3-203ENST00000551355 ABT1Q9ULW3 272 aaKnown RBP11.92□□□□□ -0.5
NEK3-203ENST00000551355 NOL7Q9UMY1 257 aaKnown RBP11.92□□□□□ -0.5
NEK3-203ENST00000551355 CCDC194A0A1B0GVG4 234 aa11.91□□□□□ -0.5
NEK3-203ENST00000551355 SPDYE16A6NNV3 312 aaPredicted RBP11.91□□□□□ -0.5
NEK3-203ENST00000551355 M0R2N6 131 aa11.91□□□□□ -0.5
NEK3-203ENST00000551355 PIK3CDO00329 1044 aa11.91□□□□□ -0.5
NEK3-203ENST00000551355 BAG4O95429 457 aaKnown RBP11.91□□□□□ -0.5
NEK3-203ENST00000551355 SLC10A3P09131 477 aa11.91□□□□□ -0.5
NEK3-203ENST00000551355 AP3B2Q13367 1082 aa11.91□□□□□ -0.5
NEK3-203ENST00000551355 NPY5RQ15761 445 aa11.91□□□□□ -0.5
NEK3-203ENST00000551355 USH1GQ495M9 461 aa11.91□□□□□ -0.5
NEK3-203ENST00000551355 MYSM1Q5VVJ2 828 aa11.91□□□□□ -0.5
NEK3-203ENST00000551355 GPAT2Q6NUI2 795 aa11.91□□□□□ -0.5
NEK3-203ENST00000551355 TYW1BQ6NUM6 668 aa11.91□□□□□ -0.5
NEK3-203ENST00000551355 CCDC174Q6PII3 467 aa11.91□□□□□ -0.5
NEK3-203ENST00000551355 SAMD1Q6SPF0 538 aaPredicted RBP11.91□□□□□ -0.5
NEK3-203ENST00000551355 RASAL3Q86YV0 1011 aa11.91□□□□□ -0.5
NEK3-203ENST00000551355 REM2Q8IYK8 340 aaPredicted RBP11.91□□□□□ -0.5
NEK3-203ENST00000551355 ATG4CQ96DT6 458 aa11.91□□□□□ -0.5
NEK3-203ENST00000551355 TEX13BQ9BXU2 312 aa11.91□□□□□ -0.5
NEK3-203ENST00000551355 ASCC2Q9H1I8 757 aaPredicted RBP11.91□□□□□ -0.5
NEK3-203ENST00000551355 RTN4Q9NQC3 1192 aaKnown RBP11.91□□□□□ -0.5
NEK3-203ENST00000551355 OTOFQ9HC10 1997 aa11.9□□□□□ -0.5
NEK3-203ENST00000551355 ZNF536O15090 1300 aa11.9□□□□□ -0.5
NEK3-203ENST00000551355 DDX11L8A8MPP1 907 aa11.9□□□□□ -0.5
NEK3-203ENST00000551355 BMP15O95972 392 aa11.9□□□□□ -0.5
NEK3-203ENST00000551355 GCLCP48506 637 aaPredicted RBP11.9□□□□□ -0.5
NEK3-203ENST00000551355 HERVK_113P62684 666 aa11.9□□□□□ -0.5
NEK3-203ENST00000551355 SREBF2Q12772 1141 aa11.9□□□□□ -0.5
NEK3-203ENST00000551355 REPS2Q8NFH8 660 aa11.9□□□□□ -0.5
NEK3-203ENST00000551355 TNFRSF25Q93038 417 aa11.9□□□□□ -0.5
NEK3-203ENST00000551355 SHISA4Q96DD7 197 aa11.9□□□□□ -0.5
NEK3-203ENST00000551355 PARK7Q99497 189 aaKnown RBP11.9□□□□□ -0.5
NEK3-203ENST00000551355 NAP1L4Q99733 375 aaKnown RBP11.9□□□□□ -0.5
NEK3-203ENST00000551355 EHMT1Q9H9B1 1298 aa11.9□□□□□ -0.5
NEK3-203ENST00000551355 CREBZFQ9NS37 354 aa11.9□□□□□ -0.5
NEK3-203ENST00000551355 FBXO40Q9UH90 709 aa11.9□□□□□ -0.5
NEK3-203ENST00000551355 PCDHA6Q9UN73 950 aa11.9□□□□□ -0.5
NEK3-203ENST00000551355 CEP131Q9UPN4 1083 aa11.9□□□□□ -0.5
NEK3-203ENST00000551355 RABGAP1Q9Y3P9 1069 aa11.9□□□□□ -0.5
NEK3-203ENST00000551355 PCDHA8Q9Y5H6 950 aa11.9□□□□□ -0.5
NEK3-203ENST00000551355 PHIPQ8WWQ0 1821 aa11.9□□□□□ -0.5
NEK3-203ENST00000551355 KIF28PB7ZC32 967 aa11.89□□□□□ -0.51
NEK3-203ENST00000551355 BTBD19C9JJ37 291 aa11.89□□□□□ -0.51
NEK3-203ENST00000551355 GCOM1H8Y6P7 765 aaPredicted RBP11.89□□□□□ -0.51
NEK3-203ENST00000551355 PDHXO00330 501 aa11.89□□□□□ -0.51
NEK3-203ENST00000551355 SLC25A27O95847 323 aa11.89□□□□□ -0.51
NEK3-203ENST00000551355 POLR2MP0CAP2 368 aa11.89□□□□□ -0.51
NEK3-203ENST00000551355 STAT3P40763 770 aa11.89□□□□□ -0.51
NEK3-203ENST00000551355 CLK2P49760 499 aaKnown RBP11.89□□□□□ -0.51
NEK3-203ENST00000551355 APLP1P51693 650 aa11.89□□□□□ -0.51
NEK3-203ENST00000551355 SNAP25P60880 206 aa11.89□□□□□ -0.51
NEK3-203ENST00000551355 GHRHRQ02643 423 aa11.89□□□□□ -0.51
NEK3-203ENST00000551355 DNM1Q05193 864 aaKnown RBP11.89□□□□□ -0.51
NEK3-203ENST00000551355 NR5A1Q13285 461 aa11.89□□□□□ -0.51
NEK3-203ENST00000551355 ORC2Q13416 577 aaPredicted RBP11.89□□□□□ -0.51
NEK3-203ENST00000551355 NONOQ15233 471 aaKnown RBP eCLIP11.89□□□□□ -0.51
NEK3-203ENST00000551355 CPXCR1Q8N123 301 aa11.89□□□□□ -0.51
NEK3-203ENST00000551355 CHST13Q8NET6 341 aa11.89□□□□□ -0.51
NEK3-203ENST00000551355 OXER1Q8TDS5 423 aa11.89□□□□□ -0.51
NEK3-203ENST00000551355 BRI3BPQ8WY22 251 aa11.89□□□□□ -0.51
NEK3-203ENST00000551355 AGBL1Q96MI9 1066 aa11.89□□□□□ -0.51
NEK3-203ENST00000551355 P2RX7Q99572 595 aaKnown RBP11.89□□□□□ -0.51
NEK3-203ENST00000551355 RAVER2Q9HCJ3 691 aaKnown RBP11.89□□□□□ -0.51
NEK3-203ENST00000551355 POLR3EQ9NVU0 708 aa11.89□□□□□ -0.51
NEK3-203ENST00000551355 RTEL1Q9NZ71 1219 aa11.89□□□□□ -0.51
NEK3-203ENST00000551355 ZNF214Q9UL59 606 aaPredicted RBP11.89□□□□□ -0.51
NEK3-203ENST00000551355 SPDYE3A6NKU9 549 aa11.88□□□□□ -0.51
NEK3-203ENST00000551355 YEATS4O95619 227 aa11.88□□□□□ -0.51
NEK3-203ENST00000551355 ALAS1P13196 640 aa11.88□□□□□ -0.51
NEK3-203ENST00000551355 NCLP19338 710 aaKnown RBP11.88□□□□□ -0.51
NEK3-203ENST00000551355 CCNA1P78396 465 aa11.88□□□□□ -0.51
NEK3-203ENST00000551355 TMEM132BQ14DG7 1078 aa11.88□□□□□ -0.51
NEK3-203ENST00000551355 SNRNP48Q6IEG0 339 aaKnown RBP11.88□□□□□ -0.51
NEK3-203ENST00000551355 PIK3AP1Q6ZUJ8 805 aa11.88□□□□□ -0.51
NEK3-203ENST00000551355 RIOX2Q8IUF8 465 aa11.88□□□□□ -0.51
NEK3-203ENST00000551355 JMYQ8N9B5 988 aa11.88□□□□□ -0.51
NEK3-203ENST00000551355 KCNG4Q8TDN1 519 aa11.88□□□□□ -0.51
NEK3-203ENST00000551355 SMCR8Q8TEV9 937 aaPredicted RBP11.88□□□□□ -0.51
NEK3-203ENST00000551355 TRERF1Q96PN7 1200 aa11.88□□□□□ -0.51
NEK3-203ENST00000551355 MORC2Q9Y6X9 1032 aaPredicted RBP11.88□□□□□ -0.51
NEK3-203ENST00000551355 ELP1O95163 1332 aa11.87□□□□□ -0.51
NEK3-203ENST00000551355 LOC285556D6RIA3 1793 aa11.87□□□□□ -0.51
NEK3-203ENST00000551355 TRPM7Q96QT4 1865 aa11.87□□□□□ -0.51
NEK3-203ENST00000551355 RASSF10A6NK89 507 aa11.87□□□□□ -0.51
NEK3-203ENST00000551355 MEIS2O14770 477 aa11.87□□□□□ -0.51
NEK3-203ENST00000551355 MCM4P33991 863 aa11.87□□□□□ -0.51
NEK3-203ENST00000551355 NASPP49321 788 aaPredicted RBP11.87□□□□□ -0.51
NEK3-203ENST00000551355 HSD17B4P51659 736 aa11.87□□□□□ -0.51
NEK3-203ENST00000551355 USP11P51784 963 aa11.87□□□□□ -0.51
NEK3-203ENST00000551355 MKRN3Q13064 507 aaKnown RBP11.87□□□□□ -0.51
NEK3-203ENST00000551355 NOGQ13253 232 aa11.87□□□□□ -0.51
NEK3-203ENST00000551355 PLS1Q14651 629 aa11.87□□□□□ -0.51
NEK3-203ENST00000551355 ANO1Q5XXA6 986 aa11.87□□□□□ -0.51
NEK3-203ENST00000551355 TMEM87AQ8NBN3 555 aa11.87□□□□□ -0.51
NEK3-203ENST00000551355 SHCBP1Q8NEM2 672 aa11.87□□□□□ -0.51
NEK3-203ENST00000551355 CLEC4DQ8WXI8 215 aa11.87□□□□□ -0.51
NEK3-203ENST00000551355 SPATA32Q96LK8 384 aa11.87□□□□□ -0.51
NEK3-203ENST00000551355 SPATC1LQ9H0A9 340 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms