RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 SLIT3O75094 1523 aa7.07□□□□□ -1.28
SCAF11-214ENST00000550893 CHURC1-FNTBB4DL54 471 aa7.07□□□□□ -1.28
SCAF11-214ENST00000550893 H3BS24 57 aa7.07□□□□□ -1.28
SCAF11-214ENST00000550893 ETV3P41162 512 aa7.07□□□□□ -1.28
SCAF11-214ENST00000550893 KIR3DL1P43629 444 aa7.07□□□□□ -1.28
SCAF11-214ENST00000550893 YARSP54577 528 aaKnown RBP7.07□□□□□ -1.28
SCAF11-214ENST00000550893 ZP2Q05996 745 aa7.07□□□□□ -1.28
SCAF11-214ENST00000550893 TNK2Q07912 1038 aa7.07□□□□□ -1.28
SCAF11-214ENST00000550893 LRRN4CLQ8ND94 238 aa7.07□□□□□ -1.28
SCAF11-214ENST00000550893 ZNF296Q8WUU4 475 aaPredicted RBP7.07□□□□□ -1.28
SCAF11-214ENST00000550893 COX4I2Q96KJ9 171 aa7.07□□□□□ -1.28
SCAF11-214ENST00000550893 ATP13A1Q9HD20 1204 aa7.07□□□□□ -1.28
SCAF11-214ENST00000550893 KLHL3Q9UH77 587 aa7.07□□□□□ -1.28
SCAF11-214ENST00000550893 ADAMTS1Q9UHI8 967 aa7.07□□□□□ -1.28
SCAF11-214ENST00000550893 POLR3AO14802 1390 aaPredicted RBP7.07□□□□□ -1.28
SCAF11-214ENST00000550893 SPATA31A3Q5VYP0 1347 aa7.06□□□□□ -1.28
SCAF11-214ENST00000550893 DNAJA2O60884 412 aa7.06□□□□□ -1.28
SCAF11-214ENST00000550893 PAPLNO95428 1278 aa7.06□□□□□ -1.28
SCAF11-214ENST00000550893 TRIM26Q12899 539 aaPredicted RBP7.06□□□□□ -1.28
SCAF11-214ENST00000550893 CWF19L2Q2TBE0 894 aaKnown RBP7.06□□□□□ -1.28
SCAF11-214ENST00000550893 SLC23A3Q6PIS1 610 aa7.06□□□□□ -1.28
SCAF11-214ENST00000550893 SLFN12Q8IYM2 578 aa7.06□□□□□ -1.28
SCAF11-214ENST00000550893 Q96M66 194 aa7.06□□□□□ -1.28
SCAF11-214ENST00000550893 FMNL2Q96PY5 1086 aa7.06□□□□□ -1.28
SCAF11-214ENST00000550893 LRRC3Q9BY71 257 aa7.06□□□□□ -1.28
SCAF11-214ENST00000550893 BACH2Q9BYV9 841 aa7.06□□□□□ -1.28
SCAF11-214ENST00000550893 RNF114Q9Y508 228 aa7.06□□□□□ -1.28
SCAF11-214ENST00000550893 SBNO1A3KN83 1393 aa7.06□□□□□ -1.28
SCAF11-214ENST00000550893 NFAT5O94916 1531 aa7.06□□□□□ -1.28
SCAF11-214ENST00000550893 PEAK1Q9H792 1746 aa7.05□□□□□ -1.28
SCAF11-214ENST00000550893 RBM47A0AV96 593 aaKnown RBP7.05□□□□□ -1.28
SCAF11-214ENST00000550893 JUNBP17275 347 aaPredicted RBP7.05□□□□□ -1.28
SCAF11-214ENST00000550893 CRKP46108 304 aa7.05□□□□□ -1.28
SCAF11-214ENST00000550893 SAFB2Q14151 953 aaKnown RBP eCLIP7.05□□□□□ -1.28
SCAF11-214ENST00000550893 HIRIP3Q9BW71 556 aaPredicted RBP7.05□□□□□ -1.28
SCAF11-214ENST00000550893 BRMS1Q9HCU9 246 aa7.05□□□□□ -1.28
SCAF11-214ENST00000550893 AFF2P51816 1311 aa7.04□□□□□ -1.28
SCAF11-214ENST00000550893 THAP5Q7Z6K1 395 aa7.04□□□□□ -1.28
SCAF11-214ENST00000550893 BAHD1Q8TBE0 780 aaPredicted RBP7.04□□□□□ -1.28
SCAF11-214ENST00000550893 UBE2FQ969M7 185 aa7.04□□□□□ -1.28
SCAF11-214ENST00000550893 ASIC4Q96FT7 647 aa7.04□□□□□ -1.28
SCAF11-214ENST00000550893 CARS2Q9HA77 564 aaKnown RBP7.04□□□□□ -1.28
SCAF11-214ENST00000550893 UBP1Q9NZI7 540 aa7.04□□□□□ -1.28
SCAF11-214ENST00000550893 LMCD1Q9NZU5 365 aa7.04□□□□□ -1.28
SCAF11-214ENST00000550893 ZSWIM5Q9P217 1185 aa7.04□□□□□ -1.28
SCAF11-214ENST00000550893 LTN1O94822 1766 aa7.04□□□□□ -1.28
SCAF11-214ENST00000550893 SHANK3Q9BYB0 1731 aa7.04□□□□□ -1.28
SCAF11-214ENST00000550893 NPHP3Q7Z494 1330 aa7.03□□□□□ -1.28
SCAF11-214ENST00000550893 LRRC37A3O60309 1634 aa7.03□□□□□ -1.28
SCAF11-214ENST00000550893 ZNF76P36508 570 aa7.03□□□□□ -1.28
SCAF11-214ENST00000550893 ATG4DQ86TL0 474 aaPredicted RBP7.03□□□□□ -1.28
SCAF11-214ENST00000550893 PIWIL2Q8TC59 973 aaKnown RBP7.03□□□□□ -1.28
SCAF11-214ENST00000550893 CCDC74BQ96LY2 380 aa7.03□□□□□ -1.28
SCAF11-214ENST00000550893 PCDHB14Q9Y5E9 798 aa7.03□□□□□ -1.28
SCAF11-214ENST00000550893 SBNO2Q9Y2G9 1366 aa7.03□□□□□ -1.28
SCAF11-214ENST00000550893 SBF2Q86WG5 1849 aa7.03□□□□□ -1.28
SCAF11-214ENST00000550893 CAMTA1Q9Y6Y1 1673 aa7.03□□□□□ -1.28
SCAF11-214ENST00000550893 PARP4Q9UKK3 1724 aaKnown RBP7.02□□□□□ -1.29
SCAF11-214ENST00000550893 ANKRD26Q9UPS8 1709 aa7.02□□□□□ -1.29
SCAF11-214ENST00000550893 SLC22A31A6NKX4 558 aa7.02□□□□□ -1.29
SCAF11-214ENST00000550893 WASH4PA8MWX3 477 aa7.02□□□□□ -1.29
SCAF11-214ENST00000550893 BIN1O00499 593 aa7.02□□□□□ -1.29
SCAF11-214ENST00000550893 ATE1O95260 518 aa7.02□□□□□ -1.29
SCAF11-214ENST00000550893 TNNI2P48788 182 aa7.02□□□□□ -1.29
SCAF11-214ENST00000550893 SEZ6Q53EL9 994 aa7.02□□□□□ -1.29
SCAF11-214ENST00000550893 PHACTR4Q8IZ21 702 aa7.02□□□□□ -1.29
SCAF11-214ENST00000550893 LRRC59Q96AG4 307 aaKnown RBP7.02□□□□□ -1.29
SCAF11-214ENST00000550893 KIF2CQ99661 725 aa7.02□□□□□ -1.29
SCAF11-214ENST00000550893 DUSP15Q9H1R2 295 aaPredicted RBP7.02□□□□□ -1.29
SCAF11-214ENST00000550893 RGPD2P0DJD1 1756 aa7.02□□□□□ -1.29
SCAF11-214ENST00000550893 CPSF1Q10570 1443 aaKnown RBP7.01□□□□□ -1.29
SCAF11-214ENST00000550893 RREB1Q92766 1687 aa7.01□□□□□ -1.29
SCAF11-214ENST00000550893 FAM208AQ9UK61 1670 aaKnown RBP7.01□□□□□ -1.29
SCAF11-214ENST00000550893 LRRN2O75325 713 aa7.01□□□□□ -1.29
SCAF11-214ENST00000550893 FANCCQ00597 558 aa7.01□□□□□ -1.29
SCAF11-214ENST00000550893 APOBRQ0VD83 1088 aa7.01□□□□□ -1.29
SCAF11-214ENST00000550893 DTWD2Q8NBA8 298 aa7.01□□□□□ -1.29
SCAF11-214ENST00000550893 RNF141Q8WVD5 230 aa7.01□□□□□ -1.29
SCAF11-214ENST00000550893 KREMEN1Q96MU8 473 aa7.01□□□□□ -1.29
SCAF11-214ENST00000550893 EHMT1Q9H9B1 1298 aa7.01□□□□□ -1.29
SCAF11-214ENST00000550893 USP6P35125 1406 aa7.01□□□□□ -1.29
SCAF11-214ENST00000550893 PPIP5K1Q6PFW1 1433 aa7.01□□□□□ -1.29
SCAF11-214ENST00000550893 USP19O94966 1318 aa7.01□□□□□ -1.29
SCAF11-214ENST00000550893 KIF20BQ96Q89 1820 aa7□□□□□ -1.29
SCAF11-214ENST00000550893 CLCQ05315 142 aa7□□□□□ -1.29
SCAF11-214ENST00000550893 ARSHQ5FYA8 562 aa7□□□□□ -1.29
SCAF11-214ENST00000550893 GK5Q6ZS86 529 aa7□□□□□ -1.29
SCAF11-214ENST00000550893 PMFBP1Q8TBY8 1022 aa7□□□□□ -1.29
SCAF11-214ENST00000550893 EAF1Q96JC9 268 aaPredicted RBP7□□□□□ -1.29
SCAF11-214ENST00000550893 SPON2Q9BUD6 331 aa7□□□□□ -1.29
SCAF11-214ENST00000550893 NT5C1AQ9BXI3 368 aa7□□□□□ -1.29
SCAF11-214ENST00000550893 CTNND2Q9UQB3 1225 aa7□□□□□ -1.29
SCAF11-214ENST00000550893 RGS13O14921 159 aa6.99□□□□□ -1.29
SCAF11-214ENST00000550893 RECKO95980 971 aa6.99□□□□□ -1.29
SCAF11-214ENST00000550893 ESR1P03372 595 aa6.99□□□□□ -1.29
SCAF11-214ENST00000550893 SRFP11831 508 aa6.99□□□□□ -1.29
SCAF11-214ENST00000550893 TPP2P29144 1249 aaPredicted RBP6.99□□□□□ -1.29
SCAF11-214ENST00000550893 GBP1P32455 592 aa6.99□□□□□ -1.29
SCAF11-214ENST00000550893 MCM4P33991 863 aa6.99□□□□□ -1.29
SCAF11-214ENST00000550893 ZNF394Q53GI3 561 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms