RNA–Protein interactions for RNA: ENST00000550811.1

TUBA1A-208, Transcript of tubulin alpha 1a, human

TSL 4

Gene TUBA1A, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1A-208	ENST00000550811	IFNAR1	P17181	557 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	SMARCA1	P28370	1054 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	HOXA7	P31268	230 aa	Predicted RBP	11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	SLC16A2	P36021	539 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	IRX3	P78415	501 aa	Predicted RBP	11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	SREBF2	Q12772	1141 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	NOG	Q13253	232 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	NTRK3	Q16288	839 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	DEFB115	Q30KQ5	88 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	TMCO4	Q5TGY1	634 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	SYDE2	Q5VT97	1194 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	TTBK2	Q6IQ55	1244 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	CYP4F22	Q6NT55	531 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	BTNL9	Q6UXG8	535 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	TRIM22	Q8IYM9	498 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	CMTR1	Q8N1G2	835 aa	Known RBP	11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	SRBD1	Q8N5C6	995 aa	Known RBP	11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	NSUN7	Q8NE18	718 aa	Known RBP	11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	CHURC1	Q8WUH1	139 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	KIFC2	Q96AC6	838 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	INTS4	Q96HW7	963 aa	Known RBP	11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	CAPNS2	Q96L46	248 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	UBA5	Q9GZZ9	404 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	CPVL	Q9H3G5	476 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	FBXO28	Q9NVF7	368 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	PNMA3	Q9UL41	463 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	PPP1R9A	Q9ULJ8	1098 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	SLC45A1	Q9Y2W3	748 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	MYPN	Q86TC9	1320 aa		11.02	□□□□□ -0.65
TUBA1A-208	ENST00000550811	BTBD19	C9JJ37	291 aa		11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	CYTH3	O43739	400 aa		11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	FMNL1	O95466	1100 aa	Predicted RBP	11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	CTDNEP1	O95476	244 aa		11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	HMGN5	P82970	282 aa	Known RBP	11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	AKAP17A	Q02040	695 aa	Known RBP	11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	SSRP1	Q08945	709 aa	Known RBP	11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	FUT2	Q10981	343 aa		11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	GPAT2	Q6NUI2	795 aa		11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	CATSPERG	Q6ZRH7	1159 aa		11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	ANKRD23	Q86SG2	305 aa		11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	NBPF11	Q86T75	865 aa		11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	ADGRF4	Q8IZF3	695 aa		11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	RETREG2	Q8NC44	543 aa		11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	PHKB	Q93100	1093 aa		11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	RRP36	Q96EU6	259 aa	Known RBP	11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	SLC26A6	Q9BXS9	759 aa		11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	RNF26	Q9BY78	433 aa	Predicted RBP	11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	RIOX1	Q9H6W3	641 aa		11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	SEC63	Q9UGP8	760 aa	Known RBP	11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	PRR12	Q9ULL5	1215 aa		11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	PCDHGA4	Q9Y5G9	962 aa		11.01	□□□□□ -0.65
TUBA1A-208	ENST00000550811	RBBP6	Q7Z6E9	1792 aa	Known RBP	11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	SPTLC1	O15269	473 aa		11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	JAK2	O60674	1132 aa		11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	PPFIA3	O75145	1194 aa		11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	INHBE	P58166	350 aa		11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	C1QTNF8	P60827	252 aa		11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	CDC37	Q16543	378 aa	Predicted RBP	11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	SLC35G1	Q2M3R5	365 aa		11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	HOMER1	Q86YM7	354 aa		11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	PRPF38A	Q8NAV1	312 aa	Known RBP	11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	SMARCC2	Q8TAQ2	1214 aa		11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	ZDHHC16	Q969W1	377 aa		11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	ATG4C	Q96DT6	458 aa		11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	PARK7	Q99497	189 aa	Known RBP	11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	ASCC2	Q9H1I8	757 aa	Predicted RBP	11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	JMJD4	Q9H9V9	463 aa		11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	ZCCHC17	Q9NP64	241 aa	Known RBP	11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	SMC3	Q9UQE7	1217 aa		11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	COLQ	Q9Y215	455 aa	Predicted RBP	11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	KIF3A	Q9Y496	699 aa		11	□□□□□ -0.65
TUBA1A-208	ENST00000550811	PDHX	O00330	501 aa		10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	IGF2BP3	O00425	579 aa	Known RBP eCLIP	10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	ZBTB5	O15062	677 aa		10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	PRPF3	O43395	683 aa	Known RBP	10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	DEXI	O95424	95 aa		10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	FDX1	P10109	184 aa		10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	HSPA6	P17066	643 aa		10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	FOSB	P53539	338 aa		10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	PRSS12	P56730	875 aa		10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	HTRA3	P83110	453 aa		10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	COG2	Q14746	738 aa		10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	FAM43A	Q8N2R8	423 aa		10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	SMCR8	Q8TEV9	937 aa	Predicted RBP	10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	PIBF1	Q8WXW3	757 aa		10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	WASF1	Q92558	559 aa		10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	MTMR8	Q96EF0	704 aa		10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	DDX11	Q96FC9	970 aa		10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	PIGS	Q96S52	555 aa		10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	RANBP17	Q9H2T7	1088 aa	Known RBP	10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	GDPD2	Q9HCC8	539 aa		10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	VAT1L	Q9HCJ6	419 aa		10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	HOXC10	Q9NYD6	342 aa		10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	ORC3	Q9UBD5	711 aa	Predicted RBP	10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	WDR33	Q9C0J8	1336 aa	Known RBP	10.99	□□□□□ -0.65
TUBA1A-208	ENST00000550811	PNMA6F	A0A0J9YX94	578 aa		10.98	□□□□□ -0.65
TUBA1A-208	ENST00000550811	hCG_1642624	A0A1W2PR95	340 aa		10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms