RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 PRNPP04156 253 aa7.38□□□□□ -1.23
SCAF11-213ENST00000550629 HOXB7P09629 217 aa7.38□□□□□ -1.23
SCAF11-213ENST00000550629 HCLS1P14317 486 aaPredicted RBP7.38□□□□□ -1.23
SCAF11-213ENST00000550629 PCNX4Q63HM2 1172 aa7.38□□□□□ -1.23
SCAF11-213ENST00000550629 LLGL2Q6P1M3 1020 aa7.38□□□□□ -1.23
SCAF11-213ENST00000550629 SV2BQ7L1I2 683 aa7.38□□□□□ -1.23
SCAF11-213ENST00000550629 SMYD4Q8IYR2 804 aaPredicted RBP7.38□□□□□ -1.23
SCAF11-213ENST00000550629 PARP2Q9UGN5 583 aa7.38□□□□□ -1.23
SCAF11-213ENST00000550629 TSPYL4Q9UJ04 414 aa7.38□□□□□ -1.23
SCAF11-213ENST00000550629 ITGB4P16144 1822 aa7.38□□□□□ -1.23
SCAF11-213ENST00000550629 SBF2Q86WG5 1849 aa7.38□□□□□ -1.23
SCAF11-213ENST00000550629 RGPD3A6NKT7 1758 aaPredicted RBP7.38□□□□□ -1.23
SCAF11-213ENST00000550629 KDM3BQ7LBC6 1761 aa7.38□□□□□ -1.23
SCAF11-213ENST00000550629 RGPD4Q7Z3J3 1758 aa7.38□□□□□ -1.23
SCAF11-213ENST00000550629 CICQ96RK0 1608 aaPredicted RBP7.38□□□□□ -1.23
SCAF11-213ENST00000550629 KCPQ6ZWJ8 1503 aa7.37□□□□□ -1.23
SCAF11-213ENST00000550629 PALLDQ8WX93 1383 aa7.37□□□□□ -1.23
SCAF11-213ENST00000550629 PLSCR1O15162 318 aa7.37□□□□□ -1.23
SCAF11-213ENST00000550629 CT47B1P0C2W7 299 aaPredicted RBP7.37□□□□□ -1.23
SCAF11-213ENST00000550629 EIF4A1P60842 406 aaKnown RBP7.37□□□□□ -1.23
SCAF11-213ENST00000550629 LRRC14Q15048 493 aa7.37□□□□□ -1.23
SCAF11-213ENST00000550629 LCE4AQ5TA78 99 aa7.37□□□□□ -1.23
SCAF11-213ENST00000550629 ZNF765Q7L2R6 523 aa7.37□□□□□ -1.23
SCAF11-213ENST00000550629 FBXO33Q7Z6M2 555 aa7.37□□□□□ -1.23
SCAF11-213ENST00000550629 ZNF428Q96B54 188 aa7.37□□□□□ -1.23
SCAF11-213ENST00000550629 TEX13AQ9BXU3 409 aaPredicted RBP7.37□□□□□ -1.23
SCAF11-213ENST00000550629 BSDC1Q9NW68 430 aaPredicted RBP7.37□□□□□ -1.23
SCAF11-213ENST00000550629 ASAP1Q9ULH1 1129 aa7.37□□□□□ -1.23
SCAF11-213ENST00000550629 CYP8B1Q9UNU6 501 aa7.37□□□□□ -1.23
SCAF11-213ENST00000550629 CSADQ9Y600 493 aa7.37□□□□□ -1.23
SCAF11-213ENST00000550629 UBR2Q8IWV8 1755 aa7.37□□□□□ -1.23
SCAF11-213ENST00000550629 BTAF1O14981 1849 aa7.36□□□□□ -1.23
SCAF11-213ENST00000550629 TNS1Q9HBL0 1735 aaKnown RBP7.36□□□□□ -1.23
SCAF11-213ENST00000550629 SNRPA1P09661 255 aaKnown RBP7.36□□□□□ -1.23
SCAF11-213ENST00000550629 ERVK-24P63145 666 aa7.36□□□□□ -1.23
SCAF11-213ENST00000550629 CDK5R2Q13319 367 aa7.36□□□□□ -1.23
SCAF11-213ENST00000550629 DUSP27Q5VZP5 1158 aa7.36□□□□□ -1.23
SCAF11-213ENST00000550629 RNF214Q8ND24 703 aa7.36□□□□□ -1.23
SCAF11-213ENST00000550629 FLCNQ8NFG4 579 aa7.36□□□□□ -1.23
SCAF11-213ENST00000550629 ISL2Q96A47 359 aa7.36□□□□□ -1.23
SCAF11-213ENST00000550629 ZNF496Q96IT1 587 aaPredicted RBP7.36□□□□□ -1.23
SCAF11-213ENST00000550629 YTHDC1Q96MU7 727 aaKnown RBP7.36□□□□□ -1.23
SCAF11-213ENST00000550629 MIS18AQ9NYP9 233 aa7.36□□□□□ -1.23
SCAF11-213ENST00000550629 LAS1LQ9Y4W2 734 aaKnown RBP7.36□□□□□ -1.23
SCAF11-213ENST00000550629 VIRMAQ69YN4 1812 aaKnown RBP7.36□□□□□ -1.23
SCAF11-213ENST00000550629 DCDC2CA8MYV0 355 aa7.35□□□□□ -1.23
SCAF11-213ENST00000550629 DAB2P98082 770 aa7.35□□□□□ -1.23
SCAF11-213ENST00000550629 TAGLNQ01995 201 aaKnown RBP7.35□□□□□ -1.23
SCAF11-213ENST00000550629 CYP27A1Q02318 531 aa7.35□□□□□ -1.23
SCAF11-213ENST00000550629 SLC39A6Q13433 755 aa7.35□□□□□ -1.23
SCAF11-213ENST00000550629 PPM1JQ5JR12 505 aa7.35□□□□□ -1.23
SCAF11-213ENST00000550629 OGFOD3Q6PK18 319 aa7.35□□□□□ -1.23
SCAF11-213ENST00000550629 PTF1AQ7RTS3 328 aa7.35□□□□□ -1.23
SCAF11-213ENST00000550629 TSR2Q969E8 191 aaKnown RBP7.35□□□□□ -1.23
SCAF11-213ENST00000550629 ASIC4Q96FT7 647 aa7.35□□□□□ -1.23
SCAF11-213ENST00000550629 PCOLCE2Q9UKZ9 415 aa7.35□□□□□ -1.23
SCAF11-213ENST00000550629 PCDHA4Q9UN74 947 aa7.35□□□□□ -1.23
SCAF11-213ENST00000550629 LY75O60449 1722 aa7.35□□□□□ -1.23
SCAF11-213ENST00000550629 KCNQ3O43525 872 aa7.34□□□□□ -1.23
SCAF11-213ENST00000550629 STARD3NLO95772 234 aa7.34□□□□□ -1.23
SCAF11-213ENST00000550629 PTPN11Q06124 597 aaPredicted RBP7.34□□□□□ -1.23
SCAF11-213ENST00000550629 EXOSC9Q06265 439 aaKnown RBP7.34□□□□□ -1.23
SCAF11-213ENST00000550629 PSMD2Q13200 908 aa7.34□□□□□ -1.23
SCAF11-213ENST00000550629 CCDC85BQ15834 202 aaPredicted RBP7.34□□□□□ -1.23
SCAF11-213ENST00000550629 MEI1Q5TIA1 1274 aa7.34□□□□□ -1.23
SCAF11-213ENST00000550629 SCARA3Q6AZY7 606 aa7.34□□□□□ -1.23
SCAF11-213ENST00000550629 TTBK2Q6IQ55 1244 aa7.34□□□□□ -1.23
SCAF11-213ENST00000550629 OGFOD2Q6N063 350 aa7.34□□□□□ -1.23
SCAF11-213ENST00000550629 C12orf40Q86WS4 652 aa7.34□□□□□ -1.23
SCAF11-213ENST00000550629 C8orf58Q8NAV2 365 aa7.34□□□□□ -1.23
SCAF11-213ENST00000550629 AGBL5Q8NDL9 886 aa7.34□□□□□ -1.23
SCAF11-213ENST00000550629 FAM161BQ96MY7 647 aa7.34□□□□□ -1.23
SCAF11-213ENST00000550629 LRRC4CQ9HCJ2 640 aa7.34□□□□□ -1.23
SCAF11-213ENST00000550629 SSU72Q9NP77 194 aaKnown RBP7.34□□□□□ -1.23
SCAF11-213ENST00000550629 C5P01031 1676 aa7.33□□□□□ -1.24
SCAF11-213ENST00000550629 FAM87AP0C7U9 286 aa7.33□□□□□ -1.24
SCAF11-213ENST00000550629 JAG1P78504 1218 aa7.33□□□□□ -1.24
SCAF11-213ENST00000550629 RING1Q06587 406 aa7.33□□□□□ -1.24
SCAF11-213ENST00000550629 TWISTNBQ3B726 338 aaPredicted RBP7.33□□□□□ -1.24
SCAF11-213ENST00000550629 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.33□□□□□ -1.24
SCAF11-213ENST00000550629 CAMKK2Q96RR4 588 aa7.33□□□□□ -1.24
SCAF11-213ENST00000550629 CCNL1Q9UK58 526 aaPredicted RBP7.33□□□□□ -1.24
SCAF11-213ENST00000550629 CNTNAP4Q9C0A0 1308 aa7.32□□□□□ -1.24
SCAF11-213ENST00000550629 VAMP4O75379 141 aa7.32□□□□□ -1.24
SCAF11-213ENST00000550629 CYP19A1P11511 503 aaPredicted RBP7.32□□□□□ -1.24
SCAF11-213ENST00000550629 NTF4P34130 210 aa7.32□□□□□ -1.24
SCAF11-213ENST00000550629 INPP5AQ14642 412 aa7.32□□□□□ -1.24
SCAF11-213ENST00000550629 TXNRD1Q16881 649 aa7.32□□□□□ -1.24
SCAF11-213ENST00000550629 ALDH1L2Q3SY69 923 aa7.32□□□□□ -1.24
SCAF11-213ENST00000550629 CCDC30Q5VVM6 783 aa7.32□□□□□ -1.24
SCAF11-213ENST00000550629 CBLL1Q75N03 491 aa7.32□□□□□ -1.24
SCAF11-213ENST00000550629 TMC4Q7Z404 712 aa7.32□□□□□ -1.24
SCAF11-213ENST00000550629 GAL3ST3Q96A11 431 aa7.32□□□□□ -1.24
SCAF11-213ENST00000550629 DBF4Q9UBU7 674 aaPredicted RBP7.32□□□□□ -1.24
SCAF11-213ENST00000550629 ZC3H7BQ9UGR2 993 aaKnown RBP7.32□□□□□ -1.24
SCAF11-213ENST00000550629 LAMB4A4D0S4 1761 aa7.32□□□□□ -1.24
SCAF11-213ENST00000550629 TJP1Q07157 1748 aa7.32□□□□□ -1.24
SCAF11-213ENST00000550629 RREB1Q92766 1687 aa7.32□□□□□ -1.24
SCAF11-213ENST00000550629 LEFTY1O75610 366 aa7.31□□□□□ -1.24
SCAF11-213ENST00000550629 CTSHP09668 335 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms