RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 CTR9Q6PD62 1173 aa10.43□□□□□ -0.74
AC055716.1-201ENST00000550077 NOL8Q76FK4 1167 aaKnown RBP10.43□□□□□ -0.74
AC055716.1-201ENST00000550077 EEPD1Q7L9B9 569 aa10.43□□□□□ -0.74
AC055716.1-201ENST00000550077 TLK2Q86UE8 772 aa10.43□□□□□ -0.74
AC055716.1-201ENST00000550077 ANKRD35Q8N283 1001 aa10.43□□□□□ -0.74
AC055716.1-201ENST00000550077 FAM133AQ8N9E0 248 aa10.43□□□□□ -0.74
AC055716.1-201ENST00000550077 KIFC2Q96AC6 838 aa10.43□□□□□ -0.74
AC055716.1-201ENST00000550077 MTIF3Q9H2K0 278 aaKnown RBP10.43□□□□□ -0.74
AC055716.1-201ENST00000550077 SH2D4AQ9H788 454 aa10.43□□□□□ -0.74
AC055716.1-201ENST00000550077 SPC25Q9HBM1 224 aa10.43□□□□□ -0.74
AC055716.1-201ENST00000550077 GOPCQ9HD26 462 aa10.43□□□□□ -0.74
AC055716.1-201ENST00000550077 ATP2A1O14983 1001 aa10.42□□□□□ -0.74
AC055716.1-201ENST00000550077 GTPBP6O43824 516 aaPredicted RBP10.42□□□□□ -0.74
AC055716.1-201ENST00000550077 RASA1P20936 1047 aa10.42□□□□□ -0.74
AC055716.1-201ENST00000550077 SNAP25P60880 206 aa10.42□□□□□ -0.74
AC055716.1-201ENST00000550077 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.42□□□□□ -0.74
AC055716.1-201ENST00000550077 GDPD5Q8WTR4 605 aa10.42□□□□□ -0.74
AC055716.1-201ENST00000550077 CCDC17Q96LX7 622 aa10.42□□□□□ -0.74
AC055716.1-201ENST00000550077 PHOX2BQ99453 314 aa10.42□□□□□ -0.74
AC055716.1-201ENST00000550077 ALDH8A1Q9H2A2 487 aaPredicted RBP10.42□□□□□ -0.74
AC055716.1-201ENST00000550077 SLC38A10Q9HBR0 1119 aa10.42□□□□□ -0.74
AC055716.1-201ENST00000550077 COG5Q9UP83 839 aa10.42□□□□□ -0.74
AC055716.1-201ENST00000550077 ZNF536O15090 1300 aa10.41□□□□□ -0.74
AC055716.1-201ENST00000550077 IL9P15248 144 aa10.41□□□□□ -0.74
AC055716.1-201ENST00000550077 COPB2P35606 906 aa10.41□□□□□ -0.74
AC055716.1-201ENST00000550077 ADD2P35612 726 aa10.41□□□□□ -0.74
AC055716.1-201ENST00000550077 GPNMBQ14956 572 aa10.41□□□□□ -0.74
AC055716.1-201ENST00000550077 RASGRP2Q7LDG7 609 aa10.41□□□□□ -0.74
AC055716.1-201ENST00000550077 HERC6Q8IVU3 1022 aa10.41□□□□□ -0.74
AC055716.1-201ENST00000550077 FBXO16Q8IX29 292 aaPredicted RBP10.41□□□□□ -0.74
AC055716.1-201ENST00000550077 RPUSD2Q8IZ73 545 aaKnown RBP10.41□□□□□ -0.74
AC055716.1-201ENST00000550077 PRPF38AQ8NAV1 312 aaKnown RBP10.41□□□□□ -0.74
AC055716.1-201ENST00000550077 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.41□□□□□ -0.74
AC055716.1-201ENST00000550077 A1CFQ9NQ94 594 aaKnown RBP10.41□□□□□ -0.74
AC055716.1-201ENST00000550077 ATP8A2Q9NTI2 1148 aa10.41□□□□□ -0.74
AC055716.1-201ENST00000550077 CLIP2Q9UDT6 1046 aa10.41□□□□□ -0.74
AC055716.1-201ENST00000550077 SIP14410 1827 aa10.41□□□□□ -0.74
AC055716.1-201ENST00000550077 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.4□□□□□ -0.74
AC055716.1-201ENST00000550077 IGKV6D-41A0A0C4DH26 115 aa10.4□□□□□ -0.74
AC055716.1-201ENST00000550077 ZBED4O75132 1171 aa10.4□□□□□ -0.74
AC055716.1-201ENST00000550077 NHLH1Q02575 133 aa10.4□□□□□ -0.74
AC055716.1-201ENST00000550077 MUM1L1Q5H9M0 696 aa10.4□□□□□ -0.74
AC055716.1-201ENST00000550077 CEP85Q6P2H3 762 aa10.4□□□□□ -0.74
AC055716.1-201ENST00000550077 FAM178BQ8IXR5 827 aa10.4□□□□□ -0.74
AC055716.1-201ENST00000550077 SNX27Q96L92 541 aa10.4□□□□□ -0.74
AC055716.1-201ENST00000550077 FBXL18Q96ME1 805 aa10.4□□□□□ -0.74
AC055716.1-201ENST00000550077 UIMC1Q96RL1 719 aa10.4□□□□□ -0.74
AC055716.1-201ENST00000550077 PUS7LQ9H0K6 701 aaKnown RBP10.4□□□□□ -0.74
AC055716.1-201ENST00000550077 MTUS1Q9ULD2 1270 aa10.4□□□□□ -0.74
AC055716.1-201ENST00000550077 SLC4A4Q9Y6R1 1079 aa10.4□□□□□ -0.74
AC055716.1-201ENST00000550077 MUC6Q6W4X9 2439 aa10.4□□□□□ -0.74
AC055716.1-201ENST00000550077 ATG2AQ2TAZ0 1938 aa10.4□□□□□ -0.74
AC055716.1-201ENST00000550077 SCN10AQ9Y5Y9 1956 aa10.39□□□□□ -0.75
AC055716.1-201ENST00000550077 TNKSO95271 1327 aa10.39□□□□□ -0.75
AC055716.1-201ENST00000550077 PRR33A8MZF0 331 aa10.39□□□□□ -0.75
AC055716.1-201ENST00000550077 IPO8O15397 1037 aaKnown RBP10.39□□□□□ -0.75
AC055716.1-201ENST00000550077 PRDM1O75626 825 aa10.39□□□□□ -0.75
AC055716.1-201ENST00000550077 CABYRO75952 493 aa10.39□□□□□ -0.75
AC055716.1-201ENST00000550077 IQCF3P0C7M6 154 aa10.39□□□□□ -0.75
AC055716.1-201ENST00000550077 DEFB103AP81534 67 aa10.39□□□□□ -0.75
AC055716.1-201ENST00000550077 TTF1Q15361 905 aaPredicted RBP10.39□□□□□ -0.75
AC055716.1-201ENST00000550077 GJD3Q8N144 294 aa10.39□□□□□ -0.75
AC055716.1-201ENST00000550077 LRRC47Q8N1G4 583 aaKnown RBP10.39□□□□□ -0.75
AC055716.1-201ENST00000550077 CHST13Q8NET6 341 aa10.39□□□□□ -0.75
AC055716.1-201ENST00000550077 RHPN1Q8TCX5 695 aa10.39□□□□□ -0.75
AC055716.1-201ENST00000550077 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.39□□□□□ -0.75
AC055716.1-201ENST00000550077 AP5M1Q9H0R1 490 aa10.39□□□□□ -0.75
AC055716.1-201ENST00000550077 BOLA2Q9H3K6 86 aa10.39□□□□□ -0.75
AC055716.1-201ENST00000550077 SUGCTQ9HAC7 445 aa10.39□□□□□ -0.75
AC055716.1-201ENST00000550077 NYAP2Q9P242 653 aa10.39□□□□□ -0.75
AC055716.1-201ENST00000550077 BRWD1Q9NSI6 2320 aa10.38□□□□□ -0.75
AC055716.1-201ENST00000550077 WDFY4Q6ZS81 3184 aa10.38□□□□□ -0.75
AC055716.1-201ENST00000550077 PURAQ00577 322 aaKnown RBP10.38□□□□□ -0.75
AC055716.1-201ENST00000550077 NBPF20Q3BBV1 942 aa10.38□□□□□ -0.75
AC055716.1-201ENST00000550077 TMED8Q6PL24 325 aaPredicted RBP10.38□□□□□ -0.75
AC055716.1-201ENST00000550077 CTAGE1Q96RT6 745 aa10.38□□□□□ -0.75
AC055716.1-201ENST00000550077 UBE2ZQ9H832 354 aaPredicted RBP10.38□□□□□ -0.75
AC055716.1-201ENST00000550077 RNF146Q9NTX7 359 aa10.38□□□□□ -0.75
AC055716.1-201ENST00000550077 SUPT16HQ9Y5B9 1047 aaKnown RBP10.38□□□□□ -0.75
AC055716.1-201ENST00000550077 GSG1L2A8MUP6 293 aa10.37□□□□□ -0.75
AC055716.1-201ENST00000550077 TMEM232C9JQI7 657 aa10.37□□□□□ -0.75
AC055716.1-201ENST00000550077 MYL3P08590 195 aa10.37□□□□□ -0.75
AC055716.1-201ENST00000550077 KCNA5P22460 613 aa10.37□□□□□ -0.75
AC055716.1-201ENST00000550077 ZKSCAN2Q63HK3 967 aa10.37□□□□□ -0.75
AC055716.1-201ENST00000550077 IQSEC1Q6DN90 963 aa10.37□□□□□ -0.75
AC055716.1-201ENST00000550077 KIAA1211Q6ZU35 1233 aa10.37□□□□□ -0.75
AC055716.1-201ENST00000550077 COPS5Q92905 334 aa10.37□□□□□ -0.75
AC055716.1-201ENST00000550077 CEP95Q96GE4 821 aa10.37□□□□□ -0.75
AC055716.1-201ENST00000550077 TRERF1Q96PN7 1200 aa10.37□□□□□ -0.75
AC055716.1-201ENST00000550077 SLC9A7Q96T83 725 aa10.37□□□□□ -0.75
AC055716.1-201ENST00000550077 FTOQ9C0B1 505 aaKnown RBP eCLIP10.37□□□□□ -0.75
AC055716.1-201ENST00000550077 ACAD9Q9H845 621 aa10.37□□□□□ -0.75
AC055716.1-201ENST00000550077 PAG1Q9NWQ8 432 aa10.37□□□□□ -0.75
AC055716.1-201ENST00000550077 MINDY4BA8MYZ0 360 aa10.36□□□□□ -0.75
AC055716.1-201ENST00000550077 ALAS1P13196 640 aa10.36□□□□□ -0.75
AC055716.1-201ENST00000550077 WDR5P61964 334 aaKnown RBP10.36□□□□□ -0.75
AC055716.1-201ENST00000550077 LEXMQ3ZCV2 418 aa10.36□□□□□ -0.75
AC055716.1-201ENST00000550077 FAM47CQ5HY64 1035 aa10.36□□□□□ -0.75
AC055716.1-201ENST00000550077 ITPRIPQ8IWB1 547 aa10.36□□□□□ -0.75
AC055716.1-201ENST00000550077 PHOSPHO2Q8TCD6 241 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms