RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 C7orf25Q9BPX7 421 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 NUP58Q9BVL2 599 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 BLZF1Q9H2G9 400 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 KANSL2Q9H9L4 492 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 VAT1LQ9HCJ6 419 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 RIC8AQ9NPQ8 531 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 INTS13Q9NVM9 706 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 PI4KBQ9UBF8 816 aa10.05□□□□□ -0.8
TMEM116-209ENST00000550020 LTBP1Q14766 1721 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 QSER1Q2KHR3 1735 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 MPHOSPH10O00566 681 aaKnown RBP10.04□□□□□ -0.8
TMEM116-209ENST00000550020 ZBTB5O15062 677 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 MARCH6O60337 910 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 MFAP3LO75121 409 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 KIF20AO95235 890 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 APBA3O96018 575 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 MMP10P09238 476 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 PBX1P40424 430 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 CRKP46108 304 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 COPB1P53618 953 aaKnown RBP10.04□□□□□ -0.8
TMEM116-209ENST00000550020 STX17P56962 302 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 PSMD2Q13200 908 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 CCDC96Q2M329 555 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 KMT5BQ4FZB7 885 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 KRT79Q5XKE5 535 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 CDC42EP5Q6NZY7 148 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 FOXR2Q6PJQ5 311 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 CYP26C1Q6V0L0 522 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 COL23A1Q86Y22 540 aaPredicted RBP10.04□□□□□ -0.8
TMEM116-209ENST00000550020 C2CD5Q86YS7 1000 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 ZNF397Q8NF99 534 aaPredicted RBP10.04□□□□□ -0.8
TMEM116-209ENST00000550020 IDI2Q9BXS1 227 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 NT5C3AQ9H0P0 336 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 BMP2KQ9NSY1 1161 aaPredicted RBP10.04□□□□□ -0.8
TMEM116-209ENST00000550020 ARGLU1Q9NWB6 273 aaPredicted RBP10.04□□□□□ -0.8
TMEM116-209ENST00000550020 NYAP2Q9P242 653 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 LRWD1Q9UFC0 647 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 DNAI1Q9UI46 699 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 SERPINA10Q9UK55 444 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 NRXN2Q9P2S2 1712 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 KDM3AQ9Y4C1 1321 aa10.04□□□□□ -0.8
TMEM116-209ENST00000550020 F8W031 263 aaPredicted RBP10.03□□□□□ -0.8
TMEM116-209ENST00000550020 KIF5CO60282 957 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 ENTPD3O75355 529 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 AKR1B1P15121 316 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 VEGFAP15692 232 aaPredicted RBP10.03□□□□□ -0.8
TMEM116-209ENST00000550020 PLCG1P19174 1290 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 CCNE1P24864 410 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 PRCPP42785 496 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 DNM2P50570 870 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 ASIC1P78348 528 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 NCBP1Q09161 790 aaKnown RBP10.03□□□□□ -0.8
TMEM116-209ENST00000550020 AP3B2Q13367 1082 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 KRT31Q15323 416 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 DOK7Q18PE1 504 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 SLC35G1Q2M3R5 365 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 HSP90AA4PQ58FG1 418 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 APTXQ7Z2E3 356 aaKnown RBP10.03□□□□□ -0.8
TMEM116-209ENST00000550020 TMEM139Q8IV31 216 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 ZNF622Q969S3 477 aaKnown RBP eCLIP10.03□□□□□ -0.83e-9■□□□□ 9
TMEM116-209ENST00000550020 MKL1Q969V6 931 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 TRIM47Q96LD4 638 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 UBA5Q9GZZ9 404 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 TMEM60Q9H2L4 133 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 GPCPD1Q9NPB8 672 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 ZNHIT6Q9NWK9 470 aaKnown RBP10.03□□□□□ -0.8
TMEM116-209ENST00000550020 MYO1AQ9UBC5 1043 aa10.03□□□□□ -0.8
TMEM116-209ENST00000550020 BIN2Q9UBW5 565 aaPredicted RBP10.03□□□□□ -0.8
TMEM116-209ENST00000550020 FRMPD2Q68DX3 1309 aaPredicted RBP10.03□□□□□ -0.8
TMEM116-209ENST00000550020 LGALS16A8MUM7 142 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 IPO7O95373 1038 aaKnown RBP10.02□□□□□ -0.81
TMEM116-209ENST00000550020 PRKCSHP14314 528 aaPredicted RBP10.02□□□□□ -0.81
TMEM116-209ENST00000550020 FECHP22830 423 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 SHMT1P34896 483 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 TECP42680 631 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 TXKP42681 527 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 USP11P51784 963 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 RBM5P52756 815 aaKnown RBP eCLIP10.02□□□□□ -0.81
TMEM116-209ENST00000550020 ADKP55263 362 aaKnown RBP10.02□□□□□ -0.81
TMEM116-209ENST00000550020 GNG11P61952 73 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 UBXN1Q04323 297 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 PDE4DQ08499 809 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 RBL2Q08999 1139 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 NAALADL2Q58DX5 795 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 FKBP15Q5T1M5 1219 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 JAKMIP3Q5VZ66 844 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 APOBEC3HQ6NTF7 200 aaKnown RBP10.02□□□□□ -0.81
TMEM116-209ENST00000550020 MOXD1Q6UVY6 613 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 TMEM179Q6ZVK1 233 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 REXO1L1PQ8IX06 675 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 ADGRF4Q8IZF3 695 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 LRRC47Q8N1G4 583 aaKnown RBP10.02□□□□□ -0.81
TMEM116-209ENST00000550020 ZNF710Q8N1W2 664 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 PROM2Q8N271 834 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 CERS5Q8N5B7 392 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 KCTD17Q8N5Z5 321 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 CSGALNACT2Q8N6G5 542 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 UBXN4Q92575 508 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 STAMQ92783 540 aa10.02□□□□□ -0.81
TMEM116-209ENST00000550020 P2RX5Q93086 422 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms