RNA–Protein interactions for RNA: ENST00000549671.5

SYT1-208, Transcript of synaptotagmin 1, humanhuman

TSL 1 (best)

Gene SYT1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-208ENST00000549671 ADAMTS10Q9H324 1103 aa7.34□□□□□ -1.23
SYT1-208ENST00000549671 EPB41L4BQ9H329 900 aa7.34□□□□□ -1.23
SYT1-208ENST00000549671 NSUN3Q9H649 340 aaKnown RBP7.34□□□□□ -1.23
SYT1-208ENST00000549671 MRS2Q9HD23 443 aa7.34□□□□□ -1.23
SYT1-208ENST00000549671 REV1Q9UBZ9 1251 aa7.34□□□□□ -1.23
SYT1-208ENST00000549671 MYOM3Q5VTT5 1437 aa7.34□□□□□ -1.23
SYT1-208ENST00000549671 PTPN23Q9H3S7 1636 aa7.34□□□□□ -1.24
SYT1-208ENST00000549671 ROBO2Q9HCK4 1378 aa7.33□□□□□ -1.24
SYT1-208ENST00000549671 MARF1Q9Y4F3 1742 aaKnown RBP7.33□□□□□ -1.24
SYT1-208ENST00000549671 UPK3BL1B0FP48 263 aa7.33□□□□□ -1.24
SYT1-208ENST00000549671 UPK3BL2E5RIL1 263 aa7.33□□□□□ -1.24
SYT1-208ENST00000549671 GARTP22102 1010 aa7.33□□□□□ -1.24
SYT1-208ENST00000549671 GLDCP23378 1020 aa7.33□□□□□ -1.24
SYT1-208ENST00000549671 CFPP27918 469 aa7.33□□□□□ -1.24
SYT1-208ENST00000549671 EGR3Q06889 387 aa7.33□□□□□ -1.24
SYT1-208ENST00000549671 LCE4AQ5TA78 99 aa7.33□□□□□ -1.24
SYT1-208ENST00000549671 ERMP1Q7Z2K6 904 aa7.33□□□□□ -1.24
SYT1-208ENST00000549671 REC114Q7Z4M0 266 aa7.33□□□□□ -1.24
SYT1-208ENST00000549671 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.33□□□□□ -1.24
SYT1-208ENST00000549671 ZSCAN18Q8TBC5 510 aaPredicted RBP7.33□□□□□ -1.24
SYT1-208ENST00000549671 GIPC2Q8TF65 315 aa7.33□□□□□ -1.24
SYT1-208ENST00000549671 DHX38Q92620 1227 aaKnown RBP7.33□□□□□ -1.24
SYT1-208ENST00000549671 VWCEQ96DN2 955 aa7.33□□□□□ -1.24
SYT1-208ENST00000549671 KREMEN1Q96MU8 473 aa7.33□□□□□ -1.24
SYT1-208ENST00000549671 CD320Q9NPF0 282 aa7.33□□□□□ -1.24
SYT1-208ENST00000549671 ZNF281Q9Y2X9 895 aa7.33□□□□□ -1.24
SYT1-208ENST00000549671 NALCNQ8IZF0 1738 aa7.32□□□□□ -1.24
SYT1-208ENST00000549671 C1orf167Q5SNV9 1468 aa7.32□□□□□ -1.24
SYT1-208ENST00000549671 RALGAPBQ86X10 1494 aa7.32□□□□□ -1.24
SYT1-208ENST00000549671 NRXN3Q9Y4C0 1643 aa7.32□□□□□ -1.24
SYT1-208ENST00000549671 FITM1A5D6W6 292 aa7.32□□□□□ -1.24
SYT1-208ENST00000549671 WASH4PA8MWX3 477 aa7.32□□□□□ -1.24
SYT1-208ENST00000549671 NFIBO00712 420 aa7.32□□□□□ -1.24
SYT1-208ENST00000549671 YY1P25490 414 aa7.32□□□□□ -1.24
SYT1-208ENST00000549671 HK2P52789 917 aa7.32□□□□□ -1.24
SYT1-208ENST00000549671 FAM196AQ6ZSG2 479 aa7.32□□□□□ -1.24
SYT1-208ENST00000549671 IRF2BP1Q8IU81 584 aa7.32□□□□□ -1.24
SYT1-208ENST00000549671 OXR1Q8N573 874 aa7.32□□□□□ -1.24
SYT1-208ENST00000549671 ENOX1Q8TC92 643 aaKnown RBP7.32□□□□□ -1.24
SYT1-208ENST00000549671 DDX17Q92841 729 aaKnown RBP7.32□□□□□ -1.24
SYT1-208ENST00000549671 LOC105371045A0A1W2PR82 267 aa7.31□□□□□ -1.24
SYT1-208ENST00000549671 ABCC5O15440 1437 aa7.31□□□□□ -1.24
SYT1-208ENST00000549671 C1QTNF9P0C862 333 aa7.31□□□□□ -1.24
SYT1-208ENST00000549671 GBP2P32456 591 aaPredicted RBP7.31□□□□□ -1.24
SYT1-208ENST00000549671 ERVFC1P60507 584 aa7.31□□□□□ -1.24
SYT1-208ENST00000549671 LRRC56Q8IYG6 542 aaPredicted RBP7.31□□□□□ -1.24
SYT1-208ENST00000549671 DIRC2Q96SL1 478 aa7.31□□□□□ -1.24
SYT1-208ENST00000549671 CWC22Q9HCG8 908 aaKnown RBP7.31□□□□□ -1.24
SYT1-208ENST00000549671 DCP1AQ9NPI6 582 aaPredicted RBP7.31□□□□□ -1.24
SYT1-208ENST00000549671 PCDHA11Q9Y5I1 949 aa7.31□□□□□ -1.24
SYT1-208ENST00000549671 BRWD3Q6RI45 1802 aa7.31□□□□□ -1.24
SYT1-208ENST00000549671 SLIT2O94813 1529 aa7.31□□□□□ -1.24
SYT1-208ENST00000549671 DISP2A7MBM2 1401 aa7.3□□□□□ -1.24
SYT1-208ENST00000549671 MINDY4BA8MYZ0 360 aa7.3□□□□□ -1.24
SYT1-208ENST00000549671 ATE1O95260 518 aa7.3□□□□□ -1.24
SYT1-208ENST00000549671 CHRNEQ04844 493 aa7.3□□□□□ -1.24
SYT1-208ENST00000549671 SNX17Q15036 470 aa7.3□□□□□ -1.24
SYT1-208ENST00000549671 ZNF326Q5BKZ1 582 aaKnown RBP7.3□□□□□ -1.24
SYT1-208ENST00000549671 SNAP47Q5SQN1 464 aa7.3□□□□□ -1.24
SYT1-208ENST00000549671 AMIGO3Q86WK7 504 aa7.3□□□□□ -1.24
SYT1-208ENST00000549671 PRAG1Q86YV5 1406 aa7.29□□□□□ -1.24
SYT1-208ENST00000549671 CHURC1-FNTBB4DL54 471 aa7.29□□□□□ -1.24
SYT1-208ENST00000549671 RGS13O14921 159 aa7.29□□□□□ -1.24
SYT1-208ENST00000549671 DNAJA2O60884 412 aa7.29□□□□□ -1.24
SYT1-208ENST00000549671 TEKQ02763 1124 aa7.29□□□□□ -1.24
SYT1-208ENST00000549671 DUSP4Q13115 394 aa7.29□□□□□ -1.24
SYT1-208ENST00000549671 GOLM1Q8NBJ4 401 aa7.29□□□□□ -1.24
SYT1-208ENST00000549671 RNF32Q9H0A6 362 aa7.29□□□□□ -1.24
SYT1-208ENST00000549671 SLC6A17Q9H1V8 727 aa7.29□□□□□ -1.24
SYT1-208ENST00000549671 RAPGEFL1Q9UHV5 662 aa7.29□□□□□ -1.24
SYT1-208ENST00000549671 IQGAP3Q86VI3 1631 aa7.29□□□□□ -1.24
SYT1-208ENST00000549671 GREM1O60565 184 aa7.28□□□□□ -1.24
SYT1-208ENST00000549671 LRRN2O75325 713 aa7.28□□□□□ -1.24
SYT1-208ENST00000549671 TMEM253P0C7T8 217 aa7.28□□□□□ -1.24
SYT1-208ENST00000549671 TNNI2P48788 182 aa7.28□□□□□ -1.24
SYT1-208ENST00000549671 RNF4P78317 190 aa7.28□□□□□ -1.24
SYT1-208ENST00000549671 CWF19L2Q2TBE0 894 aaKnown RBP7.28□□□□□ -1.24
SYT1-208ENST00000549671 LCNL1Q6ZST4 164 aa7.28□□□□□ -1.24
SYT1-208ENST00000549671 SPPL2CQ8IUH8 684 aa7.28□□□□□ -1.24
SYT1-208ENST00000549671 ANKS4BQ8N8V4 417 aa7.28□□□□□ -1.24
SYT1-208ENST00000549671 BAHD1Q8TBE0 780 aaPredicted RBP7.28□□□□□ -1.24
SYT1-208ENST00000549671 SYTL5Q8TDW5 730 aaPredicted RBP7.28□□□□□ -1.24
SYT1-208ENST00000549671 LINC01599Q8WXQ3 324 aa7.28□□□□□ -1.24
SYT1-208ENST00000549671 SYTL4Q96C24 671 aaPredicted RBP7.28□□□□□ -1.24
SYT1-208ENST00000549671 COPRSQ9NQ92 184 aa7.28□□□□□ -1.24
SYT1-208ENST00000549671 RRP7BPQ9NSQ0 103 aa7.28□□□□□ -1.24
SYT1-208ENST00000549671 KLHL3Q9UH77 587 aa7.28□□□□□ -1.24
SYT1-208ENST00000549671 PXDNQ92626 1479 aa7.28□□□□□ -1.24
SYT1-208ENST00000549671 PEX10O60683 326 aa7.27□□□□□ -1.25
SYT1-208ENST00000549671 MRPL58Q14197 206 aaKnown RBP7.27□□□□□ -1.25
SYT1-208ENST00000549671 UNC5CLQ8IV45 518 aa7.27□□□□□ -1.25
SYT1-208ENST00000549671 KRTAP4-9Q9BYQ8 210 aa7.27□□□□□ -1.25
SYT1-208ENST00000549671 KBTBD4Q9NVX7 518 aa7.27□□□□□ -1.25
SYT1-208ENST00000549671 GMIPQ9P107 970 aa7.27□□□□□ -1.25
SYT1-208ENST00000549671 KIAA1522Q9P206 1035 aaPredicted RBP7.27□□□□□ -1.25
SYT1-208ENST00000549671 YBX2Q9Y2T7 364 aaKnown RBP7.27□□□□□ -1.25
SYT1-208ENST00000549671 DAPK1P53355 1430 aa7.27□□□□□ -1.25
SYT1-208ENST00000549671 METP08581 1390 aa7.26□□□□□ -1.25
SYT1-208ENST00000549671 SHISA3A0PJX4 238 aa7.26□□□□□ -1.25
SYT1-208ENST00000549671 GRIN3BO60391 1043 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms