RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 ATP8A2Q9NTI2 1148 aa10.73□□□□□ -0.69
UBE2N-203ENST00000549490 LMCD1Q9NZU5 365 aa10.73□□□□□ -0.69
UBE2N-203ENST00000549490 CTDP1Q9Y5B0 961 aaPredicted RBP10.73□□□□□ -0.69
UBE2N-203ENST00000549490 DDX49Q9Y6V7 483 aaKnown RBP10.73□□□□□ -0.69
UBE2N-203ENST00000549490 TNKSO95271 1327 aa10.73□□□□□ -0.69
UBE2N-203ENST00000549490 COL11A1P12107 1806 aaPredicted RBP10.72□□□□□ -0.69
UBE2N-203ENST00000549490 PARP14Q460N5 1801 aa10.72□□□□□ -0.69
UBE2N-203ENST00000549490 WDFY4Q6ZS81 3184 aa10.72□□□□□ -0.69
UBE2N-203ENST00000549490 LCHNA4D1U4 455 aa10.72□□□□□ -0.69
UBE2N-203ENST00000549490 IPO8O15397 1037 aaKnown RBP10.72□□□□□ -0.69
UBE2N-203ENST00000549490 RFC2P35250 354 aa10.72□□□□□ -0.69
UBE2N-203ENST00000549490 LEXMQ3ZCV2 418 aa10.72□□□□□ -0.69
UBE2N-203ENST00000549490 SLFNL1Q499Z3 407 aa10.72□□□□□ -0.69
UBE2N-203ENST00000549490 TAPT1Q6NXT6 567 aa10.72□□□□□ -0.69
UBE2N-203ENST00000549490 AACSQ86V21 672 aa10.72□□□□□ -0.69
UBE2N-203ENST00000549490 GDPD5Q8WTR4 605 aa10.72□□□□□ -0.69
UBE2N-203ENST00000549490 CLUAP1Q96AJ1 413 aa10.72□□□□□ -0.69
UBE2N-203ENST00000549490 KCNH6Q9H252 994 aa10.72□□□□□ -0.69
UBE2N-203ENST00000549490 C1orf115Q9H7X2 142 aa10.72□□□□□ -0.69
UBE2N-203ENST00000549490 POTEB3A0JP26 581 aa10.71□□□□□ -0.69
UBE2N-203ENST00000549490 ASB14A6NK59 587 aa10.71□□□□□ -0.69
UBE2N-203ENST00000549490 GOLIM4O00461 696 aa10.71□□□□□ -0.69
UBE2N-203ENST00000549490 MBD4O95243 580 aa10.71□□□□□ -0.69
UBE2N-203ENST00000549490 IQCF3P0C7M6 154 aa10.71□□□□□ -0.69
UBE2N-203ENST00000549490 IL9P15248 144 aa10.71□□□□□ -0.69
UBE2N-203ENST00000549490 KCNA5P22460 613 aa10.71□□□□□ -0.69
UBE2N-203ENST00000549490 OAZ1P54368 228 aa10.71□□□□□ -0.69
UBE2N-203ENST00000549490 IQSEC1Q6DN90 963 aa10.71□□□□□ -0.69
UBE2N-203ENST00000549490 POTEBQ6S5H4 581 aa10.71□□□□□ -0.69
UBE2N-203ENST00000549490 FTOQ9C0B1 505 aaKnown RBP eCLIP10.71□□□□□ -0.69
UBE2N-203ENST00000549490 HOMER2Q9NSB8 354 aa10.71□□□□□ -0.69
UBE2N-203ENST00000549490 NYAP2Q9P242 653 aa10.71□□□□□ -0.69
UBE2N-203ENST00000549490 Q9Y3F1 56 aa10.71□□□□□ -0.69
UBE2N-203ENST00000549490 NAV1Q8NEY1 1877 aa10.7□□□□□ -0.7
UBE2N-203ENST00000549490 GRXCR2A6NFK2 248 aa10.7□□□□□ -0.7
UBE2N-203ENST00000549490 DCXO43602 365 aa10.7□□□□□ -0.7
UBE2N-203ENST00000549490 PTCRAQ6ISU1 281 aaPredicted RBP10.7□□□□□ -0.7
UBE2N-203ENST00000549490 CTR9Q6PD62 1173 aa10.7□□□□□ -0.7
UBE2N-203ENST00000549490 EEPD1Q7L9B9 569 aa10.7□□□□□ -0.7
UBE2N-203ENST00000549490 TMCO2Q7Z6W1 182 aaPredicted RBP10.7□□□□□ -0.7
UBE2N-203ENST00000549490 FBXO16Q8IX29 292 aaPredicted RBP10.7□□□□□ -0.7
UBE2N-203ENST00000549490 AMOTL1Q8IY63 956 aa10.7□□□□□ -0.7
UBE2N-203ENST00000549490 TMEM57Q8N5G2 664 aa10.7□□□□□ -0.7
UBE2N-203ENST00000549490 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.7□□□□□ -0.7
UBE2N-203ENST00000549490 ANKS1AQ92625 1134 aa10.7□□□□□ -0.7
UBE2N-203ENST00000549490 FRAT1Q92837 279 aaPredicted RBP10.7□□□□□ -0.7
UBE2N-203ENST00000549490 SUGCTQ9HAC7 445 aa10.7□□□□□ -0.7
UBE2N-203ENST00000549490 A1CFQ9NQ94 594 aaKnown RBP10.7□□□□□ -0.7
UBE2N-203ENST00000549490 FEM1BQ9UK73 627 aa10.7□□□□□ -0.7
UBE2N-203ENST00000549490 ZNF536O15090 1300 aa10.69□□□□□ -0.7
UBE2N-203ENST00000549490 PITPNM1O00562 1244 aa10.69□□□□□ -0.7
UBE2N-203ENST00000549490 BAIAP3O94812 1187 aa10.69□□□□□ -0.7
UBE2N-203ENST00000549490 RASA1P20936 1047 aa10.69□□□□□ -0.7
UBE2N-203ENST00000549490 ADD2P35612 726 aa10.69□□□□□ -0.7
UBE2N-203ENST00000549490 PURAQ00577 322 aaKnown RBP10.69□□□□□ -0.7
UBE2N-203ENST00000549490 KIAA1211Q6ZU35 1233 aa10.69□□□□□ -0.7
UBE2N-203ENST00000549490 RETREG2Q8NC44 543 aa10.69□□□□□ -0.7
UBE2N-203ENST00000549490 PPP1R13LQ8WUF5 828 aa10.69□□□□□ -0.7
UBE2N-203ENST00000549490 PHOX2BQ99453 314 aa10.69□□□□□ -0.7
UBE2N-203ENST00000549490 DNAJC2Q99543 621 aaKnown RBP10.69□□□□□ -0.7
UBE2N-203ENST00000549490 ACAD9Q9H845 621 aa10.69□□□□□ -0.7
UBE2N-203ENST00000549490 POLR3EQ9NVU0 708 aa10.69□□□□□ -0.7
UBE2N-203ENST00000549490 CLIP2Q9UDT6 1046 aa10.69□□□□□ -0.7
UBE2N-203ENST00000549490 MTUS1Q9ULD2 1270 aa10.69□□□□□ -0.7
UBE2N-203ENST00000549490 COG6Q9Y2V7 657 aa10.69□□□□□ -0.7
UBE2N-203ENST00000549490 ZBED9Q6R2W3 1325 aa10.68□□□□□ -0.7
UBE2N-203ENST00000549490 CHGBP05060 677 aa10.68□□□□□ -0.7
UBE2N-203ENST00000549490 MYL3P08590 195 aa10.68□□□□□ -0.7
UBE2N-203ENST00000549490 KCNJ6P48051 423 aa10.68□□□□□ -0.7
UBE2N-203ENST00000549490 ERVK-21P61565 698 aa10.68□□□□□ -0.7
UBE2N-203ENST00000549490 WDR5P61964 334 aaKnown RBP10.68□□□□□ -0.7
UBE2N-203ENST00000549490 NBPF20Q3BBV1 942 aa10.68□□□□□ -0.7
UBE2N-203ENST00000549490 DUSP28Q4G0W2 176 aa10.68□□□□□ -0.7
UBE2N-203ENST00000549490 FAM47CQ5HY64 1035 aa10.68□□□□□ -0.7
UBE2N-203ENST00000549490 HFE2Q6ZVN8 426 aa10.68□□□□□ -0.7
UBE2N-203ENST00000549490 DDRGK1Q96HY6 314 aa10.68□□□□□ -0.7
UBE2N-203ENST00000549490 MTG1Q9BT17 334 aaPredicted RBP10.68□□□□□ -0.7
UBE2N-203ENST00000549490 ZBED2Q9BTP6 218 aa10.68□□□□□ -0.7
UBE2N-203ENST00000549490 IL1RAPL2Q9NP60 686 aa10.68□□□□□ -0.7
UBE2N-203ENST00000549490 RNF146Q9NTX7 359 aa10.68□□□□□ -0.7
UBE2N-203ENST00000549490 EXOC6BQ9Y2D4 811 aa10.68□□□□□ -0.7
UBE2N-203ENST00000549490 SLC4A4Q9Y6R1 1079 aa10.68□□□□□ -0.7
UBE2N-203ENST00000549490 IGKV6D-41A0A0C4DH26 115 aa10.67□□□□□ -0.7
UBE2N-203ENST00000549490 DEFB103AP81534 67 aa10.67□□□□□ -0.7
UBE2N-203ENST00000549490 GPNMBQ14956 572 aa10.67□□□□□ -0.7
UBE2N-203ENST00000549490 PUS10Q3MIT2 529 aaKnown RBP10.67□□□□□ -0.7
UBE2N-203ENST00000549490 ERC1Q8IUD2 1116 aa10.67□□□□□ -0.7
UBE2N-203ENST00000549490 STK11IPQ8N1F8 1099 aa10.67□□□□□ -0.7
UBE2N-203ENST00000549490 NEK9Q8TD19 979 aa10.67□□□□□ -0.7
UBE2N-203ENST00000549490 MKL1Q969V6 931 aa10.67□□□□□ -0.7
UBE2N-203ENST00000549490 PURBQ96QR8 312 aaKnown RBP10.67□□□□□ -0.7
UBE2N-203ENST00000549490 TGS1Q96RS0 853 aaKnown RBP10.67□□□□□ -0.7
UBE2N-203ENST00000549490 RAD9AQ99638 391 aa10.67□□□□□ -0.7
UBE2N-203ENST00000549490 VTA1Q9NP79 307 aa10.67□□□□□ -0.7
UBE2N-203ENST00000549490 MCM3APO60318 1980 aa10.66□□□□□ -0.7
UBE2N-203ENST00000549490 CACNA1AO00555 2505 aa10.66□□□□□ -0.7
UBE2N-203ENST00000549490 LINC01553A4QN01 128 aa10.66□□□□□ -0.7
UBE2N-203ENST00000549490 TMEM232C9JQI7 657 aa10.66□□□□□ -0.7
UBE2N-203ENST00000549490 H3BQ06 376 aaPredicted RBP10.66□□□□□ -0.7
UBE2N-203ENST00000549490 FDX1P10109 184 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms