RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 KIF22Q14807 665 aa11.25□□□□□ -0.61
SMARCD1-206ENST00000549274 RIOX2Q8IUF8 465 aa11.25□□□□□ -0.61
SMARCD1-206ENST00000549274 CCDC82Q8N4S0 544 aa11.25□□□□□ -0.61
SMARCD1-206ENST00000549274 CUL5Q93034 780 aa11.25□□□□□ -0.61
SMARCD1-206ENST00000549274 PHKBQ93100 1093 aa11.25□□□□□ -0.61
SMARCD1-206ENST00000549274 PIGSQ96S52 555 aa11.25□□□□□ -0.61
SMARCD1-206ENST00000549274 PTPN18Q99952 460 aa11.25□□□□□ -0.61
SMARCD1-206ENST00000549274 SPATC1LQ9H0A9 340 aa11.25□□□□□ -0.61
SMARCD1-206ENST00000549274 EHMT1Q9H9B1 1298 aa11.25□□□□□ -0.61
SMARCD1-206ENST00000549274 C6orf50Q9HD87 102 aa11.25□□□□□ -0.61
SMARCD1-206ENST00000549274 B4DLN1 442 aa11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 H3BQV1 296 aa11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 STRNO43815 780 aa11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 AOC2O75106 756 aa11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 GJB2P29033 226 aa11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 MRPL12P52815 198 aaKnown RBP11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 DGKZQ13574 1117 aa11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 PLS1Q14651 629 aa11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 IFFO2Q5TF58 517 aa11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 SNRNP48Q6IEG0 339 aaKnown RBP11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 HEATR3Q7Z4Q2 680 aa11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 ABRAQ8N0Z2 381 aa11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 C8orf76Q96K31 380 aa11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 MPHOSPH6Q99547 160 aaKnown RBP11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 ALG1Q9BT22 464 aa11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 PAGR1Q9BTK6 254 aa11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 ACAD9Q9H845 621 aa11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 SLC5A4Q9NY91 659 aa11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 ZNF214Q9UL59 606 aaPredicted RBP11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 PCDHA1Q9Y5I3 950 aa11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 IVNS1ABPQ9Y6Y0 642 aa11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 PFASO15067 1338 aa11.24□□□□□ -0.61
SMARCD1-206ENST00000549274 CTDNEP1O95476 244 aa11.23□□□□□ -0.61
SMARCD1-206ENST00000549274 CYP2C8P10632 490 aa11.23□□□□□ -0.61
SMARCD1-206ENST00000549274 NLRP5P59047 1200 aa11.23□□□□□ -0.61
SMARCD1-206ENST00000549274 CRHR2Q13324 411 aa11.23□□□□□ -0.61
SMARCD1-206ENST00000549274 TMEM132BQ14DG7 1078 aa11.23□□□□□ -0.61
SMARCD1-206ENST00000549274 CCDC174Q6PII3 467 aa11.23□□□□□ -0.61
SMARCD1-206ENST00000549274 RASGRP2Q7LDG7 609 aa11.23□□□□□ -0.61
SMARCD1-206ENST00000549274 CPXCR1Q8N123 301 aa11.23□□□□□ -0.61
SMARCD1-206ENST00000549274 CMTR1Q8N1G2 835 aaKnown RBP11.23□□□□□ -0.61
SMARCD1-206ENST00000549274 REPS2Q8NFH8 660 aa11.23□□□□□ -0.61
SMARCD1-206ENST00000549274 SPOCK2Q92563 424 aa11.23□□□□□ -0.61
SMARCD1-206ENST00000549274 LOC102724159A0A0B4J2E5 919 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 FOSP01100 380 aaPredicted RBP11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 GNRH1P01148 92 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 BCRP11274 1271 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 ALAS1P13196 640 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 ADCY7P51828 1080 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 AP3B2Q13367 1082 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 PWP2Q15269 919 aaKnown RBP11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 USH1GQ495M9 461 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 LARP1BQ659C4 914 aaKnown RBP11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 C17orf99Q6UX52 265 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 NCAPG2Q86XI2 1143 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 ANKRD13CQ8N6S4 541 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 DAGLBQ8NCG7 672 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 SOCS4Q8WXH5 440 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 PIBF1Q8WXW3 757 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 DDX11Q96FC9 970 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 IPO9Q96P70 1041 aaKnown RBP11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 ADGRA2Q96PE1 1338 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 TRERF1Q96PN7 1200 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 ZMYND12Q9H0C1 365 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 RAVER2Q9HCJ3 691 aaKnown RBP11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 RIC8AQ9NPQ8 531 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 RNF146Q9NTX7 359 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 RBPJLQ9UBG7 517 aa11.22□□□□□ -0.61
SMARCD1-206ENST00000549274 ZNF236Q9UL36 1845 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 ZNF536O15090 1300 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 GCOM1H8Y6P7 765 aaPredicted RBP11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 STXBP3O00186 592 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 PIK3CDO00329 1044 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 JAK2O60674 1132 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 POLR2MP0CAP2 368 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 FCER1AP12319 257 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 HOXD10P28358 340 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 GHRHRQ02643 423 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 ST3GAL1Q11201 340 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 GNL2Q13823 731 aaKnown RBP11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 KCTD2Q14681 263 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 PKN1Q16512 942 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 WWC2Q6AWC2 1192 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 COA7Q96BR5 231 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 ERO1AQ96HE7 468 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 NAP1L4Q99733 375 aaKnown RBP11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 MOV10L1Q9BXT6 1211 aaKnown RBP11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 CPVLQ9H3G5 476 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 PSTPIP2Q9H939 334 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 RNF186Q9NXI6 227 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 BTBD7Q9P203 1132 aa11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 CIZ1Q9ULV3 898 aaPredicted RBP11.21□□□□□ -0.61
SMARCD1-206ENST00000549274 MGAMO43451 1857 aa11.21□□□□□ -0.62
SMARCD1-206ENST00000549274 PLXNB2O15031 1838 aa11.21□□□□□ -0.62
SMARCD1-206ENST00000549274 SMCO2A6NFE2 343 aa11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 SPDYE3A6NKU9 549 aa11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 FDPSP14324 419 aaKnown RBP11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 KRT2P35908 639 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms