RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 PDGFAP04085 211 aa7.29□□□□□ -1.24
EFCAB2-215ENST00000549220 GNAI2P04899 355 aa7.29□□□□□ -1.24
EFCAB2-215ENST00000549220 CD68P34810 354 aaPredicted RBP7.29□□□□□ -1.24
EFCAB2-215ENST00000549220 EIF6P56537 245 aaKnown RBP7.29□□□□□ -1.24
EFCAB2-215ENST00000549220 LRRC24Q50LG9 513 aa7.29□□□□□ -1.24
EFCAB2-215ENST00000549220 METTL24Q5JXM2 366 aa7.29□□□□□ -1.24
EFCAB2-215ENST00000549220 TTC39BQ5VTQ0 682 aaPredicted RBP7.29□□□□□ -1.24
EFCAB2-215ENST00000549220 HGSNATQ68CP4 663 aa7.29□□□□□ -1.24
EFCAB2-215ENST00000549220 KLHDC7BQ96G42 594 aa7.29□□□□□ -1.24
EFCAB2-215ENST00000549220 EYA3Q99504 573 aa7.29□□□□□ -1.24
EFCAB2-215ENST00000549220 ZC3H12CQ9C0D7 883 aaKnown RBP7.29□□□□□ -1.24
EFCAB2-215ENST00000549220 RBSNQ9H1K0 784 aa7.29□□□□□ -1.24
EFCAB2-215ENST00000549220 DZANK1Q9NVP4 752 aa7.29□□□□□ -1.24
EFCAB2-215ENST00000549220 BSDC1Q9NW68 430 aaPredicted RBP7.29□□□□□ -1.24
EFCAB2-215ENST00000549220 KANSL3Q9P2N6 904 aa7.29□□□□□ -1.24
EFCAB2-215ENST00000549220 PA2G4Q9UQ80 394 aaKnown RBP7.29□□□□□ -1.24
EFCAB2-215ENST00000549220 GLTPD2A6NH11 291 aa7.28□□□□□ -1.24
EFCAB2-215ENST00000549220 SRGAP3O43295 1099 aa7.28□□□□□ -1.24
EFCAB2-215ENST00000549220 ECE2O60344 883 aa7.28□□□□□ -1.24
EFCAB2-215ENST00000549220 TRPA1O75762 1119 aa7.28□□□□□ -1.24
EFCAB2-215ENST00000549220 KLRK1P26718 216 aa7.28□□□□□ -1.24
EFCAB2-215ENST00000549220 C16orf71Q8IYS4 520 aaPredicted RBP7.28□□□□□ -1.24
EFCAB2-215ENST00000549220 EDEM1Q92611 657 aa7.28□□□□□ -1.24
EFCAB2-215ENST00000549220 ANKRD2Q9GZV1 360 aa7.28□□□□□ -1.24
EFCAB2-215ENST00000549220 HDAC5Q9UQL6 1122 aa7.28□□□□□ -1.24
EFCAB2-215ENST00000549220 AKAP11Q9UKA4 1901 aa7.28□□□□□ -1.24
EFCAB2-215ENST00000549220 CDK5RAP2Q96SN8 1893 aa7.28□□□□□ -1.24
EFCAB2-215ENST00000549220 ZNF804BA4D1E1 1349 aa7.27□□□□□ -1.24
EFCAB2-215ENST00000549220 PDIA4P13667 645 aaKnown RBP7.27□□□□□ -1.25
EFCAB2-215ENST00000549220 MPSTP25325 297 aa7.27□□□□□ -1.25
EFCAB2-215ENST00000549220 EIF1AXP47813 144 aaKnown RBP7.27□□□□□ -1.25
EFCAB2-215ENST00000549220 CD97P48960 835 aa7.27□□□□□ -1.25
EFCAB2-215ENST00000549220 IRX6P78412 446 aaPredicted RBP7.27□□□□□ -1.25
EFCAB2-215ENST00000549220 KIAA2012Q0VF49 1180 aa7.27□□□□□ -1.25
EFCAB2-215ENST00000549220 OS9Q13438 667 aaPredicted RBP7.27□□□□□ -1.25
EFCAB2-215ENST00000549220 MVPQ14764 893 aaKnown RBP7.27□□□□□ -1.25
EFCAB2-215ENST00000549220 RABL6Q3YEC7 729 aaPredicted RBP7.27□□□□□ -1.25
EFCAB2-215ENST00000549220 EAPPQ56P03 285 aaPredicted RBP7.27□□□□□ -1.25
EFCAB2-215ENST00000549220 RTFDC1Q9BY42 306 aaPredicted RBP7.27□□□□□ -1.25
EFCAB2-215ENST00000549220 KCNQ5Q9NR82 932 aa7.27□□□□□ -1.25
EFCAB2-215ENST00000549220 ZNRF3Q9ULT6 936 aa7.27□□□□□ -1.25
EFCAB2-215ENST00000549220 SOX13Q9UN79 622 aa7.27□□□□□ -1.25
EFCAB2-215ENST00000549220 JAG2Q9Y219 1238 aa7.27□□□□□ -1.25
EFCAB2-215ENST00000549220 MED23Q9ULK4 1368 aa7.26□□□□□ -1.25
EFCAB2-215ENST00000549220 PNMA6EA0A0J9YXQ4 647 aa7.26□□□□□ -1.25
EFCAB2-215ENST00000549220 YDJCA8MPS7 323 aa7.26□□□□□ -1.25
EFCAB2-215ENST00000549220 PSMD14O00487 310 aa7.26□□□□□ -1.25
EFCAB2-215ENST00000549220 SMNDC1O75940 238 aaKnown RBP eCLIP7.26□□□□□ -1.256e-23■■■■■ 105.2
EFCAB2-215ENST00000549220 RRP1P56182 461 aaKnown RBP7.26□□□□□ -1.25
EFCAB2-215ENST00000549220 PTPN12Q05209 780 aaKnown RBP7.26□□□□□ -1.25
EFCAB2-215ENST00000549220 CXCL9Q07325 125 aa7.26□□□□□ -1.25
EFCAB2-215ENST00000549220 PDE4CQ08493 712 aa7.26□□□□□ -1.25
EFCAB2-215ENST00000549220 MTMR3Q13615 1198 aa7.26□□□□□ -1.25
EFCAB2-215ENST00000549220 ECM1Q16610 540 aa7.26□□□□□ -1.25
EFCAB2-215ENST00000549220 CIAPIN1Q6FI81 312 aa7.26□□□□□ -1.25
EFCAB2-215ENST00000549220 UBASH3BQ8TF42 649 aa7.26□□□□□ -1.25
EFCAB2-215ENST00000549220 GTF3C2Q8WUA4 911 aaPredicted RBP7.26□□□□□ -1.25
EFCAB2-215ENST00000549220 PODXL2Q9NZ53 605 aa7.26□□□□□ -1.25
EFCAB2-215ENST00000549220 RAXQ9Y2V3 346 aa7.26□□□□□ -1.25
EFCAB2-215ENST00000549220 MROH5Q6ZUA9 1318 aa7.26□□□□□ -1.25
EFCAB2-215ENST00000549220 MYH8P13535 1937 aa7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 SHTN1A0MZ66 631 aa7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 CARNS1A5YM72 827 aa7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 FZD9O00144 591 aa7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 EYA2O00167 538 aa7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 ADAMTS4O75173 837 aa7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 FRAT2O75474 233 aaPredicted RBP7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 MZF1P28698 734 aaPredicted RBP7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 GYG1P46976 350 aa7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 RFX5P48382 616 aaPredicted RBP7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 GMPSP49915 693 aaPredicted RBP7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 CHAF1AQ13111 956 aaPredicted RBP7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 ZNF438Q7Z4V0 828 aa7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 VPS37DQ86XT2 251 aa7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 KRTAP19-1Q8IUB9 90 aa7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 ZDHHC13Q8IUH4 622 aa7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 GPC2Q8N158 579 aa7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 KLHL23Q8NBE8 558 aa7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 CRBNQ96SW2 442 aa7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 MXD3Q9BW11 206 aa7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 DDX19BQ9UMR2 479 aa7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 LEMD3Q9Y2U8 911 aa7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 RIPOR2Q9Y4F9 1068 aa7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 SUPT16HQ9Y5B9 1047 aaKnown RBP7.25□□□□□ -1.25
EFCAB2-215ENST00000549220 MAST2Q6P0Q8 1798 aa7.24□□□□□ -1.25
EFCAB2-215ENST00000549220 F8W031 263 aaPredicted RBP7.24□□□□□ -1.25
EFCAB2-215ENST00000549220 FZD6O60353 706 aa7.24□□□□□ -1.25
EFCAB2-215ENST00000549220 SURF6O75683 361 aaKnown RBP7.24□□□□□ -1.25
EFCAB2-215ENST00000549220 SLC5A1P13866 664 aa7.24□□□□□ -1.25
EFCAB2-215ENST00000549220 VEGFAP15692 232 aaPredicted RBP7.24□□□□□ -1.25
EFCAB2-215ENST00000549220 CDC25BP30305 580 aa7.24□□□□□ -1.25
EFCAB2-215ENST00000549220 EPS15P42566 896 aa7.24□□□□□ -1.25
EFCAB2-215ENST00000549220 TFCP2Q12800 502 aa7.24□□□□□ -1.25
EFCAB2-215ENST00000549220 G3BP1Q13283 466 aaKnown RBP eCLIP7.24□□□□□ -1.25
EFCAB2-215ENST00000549220 TNIP1Q15025 636 aa7.24□□□□□ -1.25
EFCAB2-215ENST00000549220 ATP2B3Q16720 1220 aa7.24□□□□□ -1.25
EFCAB2-215ENST00000549220 NOM1Q5C9Z4 860 aaKnown RBP7.24□□□□□ -1.25
EFCAB2-215ENST00000549220 PEAR1Q5VY43 1037 aaPredicted RBP7.24□□□□□ -1.25
EFCAB2-215ENST00000549220 ACAD11Q709F0 780 aa7.24□□□□□ -1.25
EFCAB2-215ENST00000549220 ATG9AQ7Z3C6 839 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms