RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 B2RBV5 119 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 FANCGO15287 622 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 NME1P15531 152 aaKnown RBP3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 GUCY2CP25092 1073 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 POLR2BP30876 1174 aaKnown RBP3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 CASP7P55210 303 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 PPP2R5EQ16537 467 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 DDR2Q16832 855 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 ARSHQ5FYA8 562 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 CDCP2Q5VXM1 449 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 LARP1BQ659C4 914 aaKnown RBP3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 HHIPL2Q6UWX4 724 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 NLRC3Q7RTR2 1065 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 DYMQ7RTS9 669 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 TTC6Q86TZ1 520 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 JAZF1Q86VZ6 243 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 FAM177A1Q8N128 213 aaPredicted RBP3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 RNF214Q8ND24 703 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 BAHD1Q8TBE0 780 aaPredicted RBP3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 ISL2Q96A47 359 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 TMEM87BQ96K49 555 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 TESK2Q96S53 571 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 TM9SF2Q99805 663 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 DPH2Q9BQC3 489 aaPredicted RBP3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 CNNM2Q9H8M5 875 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 ST7Q9NRC1 585 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 PICK1Q9NRD5 415 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 SEMA3GQ9NS98 782 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 SNTG2Q9NY99 539 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 SIRPGQ9P1W8 387 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 ADAM30Q9UKF2 790 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 MSRB2Q9Y3D2 182 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 TBX22Q9Y458 520 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 DAGLAQ9Y4D2 1042 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 USP47Q96K76 1375 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 DISP3Q9P2K9 1392 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 ARHGEF5Q12774 1597 aa3.2□□□□□ -1.9
DEPDC4-206ENST00000549100 LTBP3Q9NS15 1303 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 FAM135AQ9P2D6 1515 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 ZCCHC11Q5TAX3 1644 aaKnown RBP3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 TMEM265A0A087WTH1 108 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 CCDC85CA6NKD9 419 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 RBAK-RBAKDNI3L0D1 243 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 TNFRSF10CO14798 259 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 LEFTY1O75610 366 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 SLPIP03973 132 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 CEACAM5P06731 702 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 ASPAP45381 313 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 IKZF1Q13422 519 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 SLBPQ14493 270 aaKnown RBP eCLIP3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 LRRFIP1Q32MZ4 808 aaKnown RBP3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 CRB2Q5IJ48 1285 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 MRM1Q6IN84 353 aaKnown RBP3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 ZNF746Q6NUN9 644 aaPredicted RBP3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 C6orf15Q6UXA7 325 aaPredicted RBP3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 UNC5AQ6ZN44 842 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 NOP9Q86U38 636 aaKnown RBP3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 HID1Q8IV36 788 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 MCATQ8IVS2 390 aaKnown RBP3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 MRPL41Q8IXM3 137 aaKnown RBP3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 NLGN1Q8N2Q7 840 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 AFAP1Q8N556 730 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 TAB3Q8N5C8 712 aaPredicted RBP3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 C19orf47Q8N9M1 422 aaKnown RBP3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 FAM13CQ8NE31 585 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 MKL1Q969V6 931 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 DEPDC7Q96QD5 511 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 SRPK1Q96SB4 655 aaKnown RBP3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 SLC9A7Q96T83 725 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 GPR20Q99678 358 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 ADAM7Q9H2U9 754 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 ATXN3LQ9H3M9 355 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 SRRDQ9UH36 339 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 PCDHB10Q9UN67 800 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 MAPK8IP1Q9UQF2 711 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 R3HCC1Q9Y3T6 440 aaKnown RBP3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 ANKRD30AQ9BXX3 1397 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 KIF15Q9NS87 1388 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 RALGAPBQ86X10 1494 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 UGGT1Q9NYU2 1555 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 CLASP1Q7Z460 1538 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 PRAG1Q86YV5 1406 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 RNF123Q5XPI4 1314 aa3.19□□□□□ -1.9
DEPDC4-206ENST00000549100 UNC13BO14795 1591 aa3.18□□□□□ -1.9
DEPDC4-206ENST00000549100 MAST1Q9Y2H9 1570 aa3.18□□□□□ -1.9
DEPDC4-206ENST00000549100 MAGI2Q86UL8 1455 aa3.18□□□□□ -1.9
DEPDC4-206ENST00000549100 LRPPRCP42704 1394 aaKnown RBP3.18□□□□□ -1.9
DEPDC4-206ENST00000549100 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.18□□□□□ -1.9
DEPDC4-206ENST00000549100 U2SURPO15042 1029 aaKnown RBP3.18□□□□□ -1.9
DEPDC4-206ENST00000549100 MATN3O15232 486 aa3.18□□□□□ -1.9
DEPDC4-206ENST00000549100 RNGTTO60942 597 aaKnown RBP3.18□□□□□ -1.9
DEPDC4-206ENST00000549100 UBOX5O94941 541 aa3.18□□□□□ -1.9
DEPDC4-206ENST00000549100 GJB6O95452 261 aa3.18□□□□□ -1.9
DEPDC4-206ENST00000549100 RAG1P15918 1043 aa3.18□□□□□ -1.9
DEPDC4-206ENST00000549100 MLECQ14165 292 aa3.18□□□□□ -1.9
DEPDC4-206ENST00000549100 NFE2L2Q16236 605 aa3.18□□□□□ -1.9
DEPDC4-206ENST00000549100 PRAMEF13Q5VWM6 474 aa3.18□□□□□ -1.9
DEPDC4-206ENST00000549100 SLC6A19Q695T7 634 aa3.18□□□□□ -1.9
DEPDC4-206ENST00000549100 TMEM192Q8IY95 271 aa3.18□□□□□ -1.9
DEPDC4-206ENST00000549100 SLFN12Q8IYM2 578 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms