RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.22■□□□□ 0.03
PTCH1-218ENST00000548945 IL17RBQ9NRM6 502 aa15.22■□□□□ 0.03
PTCH1-218ENST00000548945 GNEQ9Y223 722 aaKnown RBP15.22■□□□□ 0.03
PTCH1-218ENST00000548945 Q9Y3F1 56 aa15.22■□□□□ 0.03
PTCH1-218ENST00000548945 SOWAHBA6NEL2 793 aa15.21■□□□□ 0.03
PTCH1-218ENST00000548945 ORC4O43929 436 aa15.21■□□□□ 0.03
PTCH1-218ENST00000548945 CD4P01730 458 aa15.21■□□□□ 0.03
PTCH1-218ENST00000548945 FGRP09769 529 aa15.21■□□□□ 0.03
PTCH1-218ENST00000548945 ALAS1P13196 640 aa15.21■□□□□ 0.03
PTCH1-218ENST00000548945 IRX5P78411 483 aaPredicted RBP15.21■□□□□ 0.03
PTCH1-218ENST00000548945 TMEM240Q5SV17 173 aa15.21■□□□□ 0.03
PTCH1-218ENST00000548945 RASIP1Q5U651 963 aa15.21■□□□□ 0.03
PTCH1-218ENST00000548945 KCTD1Q719H9 257 aa15.21■□□□□ 0.03
PTCH1-218ENST00000548945 DCAF4Q8WV16 495 aa15.21■□□□□ 0.03
PTCH1-218ENST00000548945 EVI5LQ96CN4 794 aa15.21■□□□□ 0.03
PTCH1-218ENST00000548945 CYP39A1Q9NYL5 469 aa15.21■□□□□ 0.03
PTCH1-218ENST00000548945 PRR12Q9ULL5 1215 aa15.21■□□□□ 0.03
PTCH1-218ENST00000548945 ASTN1O14525 1302 aa15.2■□□□□ 0.02
PTCH1-218ENST00000548945 LOC102724159A0A0B4J2E5 919 aa15.2■□□□□ 0.02
PTCH1-218ENST00000548945 ZEB2O60315 1214 aa15.2■□□□□ 0.02
PTCH1-218ENST00000548945 ICAM1P05362 532 aa15.2■□□□□ 0.02
PTCH1-218ENST00000548945 CTDSPL2Q05D32 466 aa15.2■□□□□ 0.02
PTCH1-218ENST00000548945 PWP2Q15269 919 aaKnown RBP15.2■□□□□ 0.02
PTCH1-218ENST00000548945 IQSEC1Q6DN90 963 aa15.2■□□□□ 0.02
PTCH1-218ENST00000548945 PSRC1Q6PGN9 363 aaPredicted RBP15.2■□□□□ 0.02
PTCH1-218ENST00000548945 NOL8Q76FK4 1167 aaKnown RBP15.2■□□□□ 0.02
PTCH1-218ENST00000548945 C16orf59Q7L2K0 433 aa15.2■□□□□ 0.02
PTCH1-218ENST00000548945 TLK2Q86UE8 772 aa15.2■□□□□ 0.02
PTCH1-218ENST00000548945 MORC4Q8TE76 937 aa15.2■□□□□ 0.02
PTCH1-218ENST00000548945 AP5M1Q9H0R1 490 aa15.2■□□□□ 0.02
PTCH1-218ENST00000548945 VTA1Q9NP79 307 aa15.2■□□□□ 0.02
PTCH1-218ENST00000548945 HELLSQ9NRZ9 838 aa15.2■□□□□ 0.02
PTCH1-218ENST00000548945 ZBTB47Q9UFB7 747 aaPredicted RBP15.2■□□□□ 0.02
PTCH1-218ENST00000548945 BDP1A6H8Y1 2624 aa15.19■□□□□ 0.02
PTCH1-218ENST00000548945 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.19■□□□□ 0.02
PTCH1-218ENST00000548945 RANBP6O60518 1105 aaKnown RBP15.19■□□□□ 0.02
PTCH1-218ENST00000548945 NMT2O60551 498 aa15.19■□□□□ 0.02
PTCH1-218ENST00000548945 CSF2RAP15509 400 aa15.19■□□□□ 0.02
PTCH1-218ENST00000548945 BEX3Q00994 111 aa15.19■□□□□ 0.02
PTCH1-218ENST00000548945 FSCN1Q16658 493 aaKnown RBP15.19■□□□□ 0.02
PTCH1-218ENST00000548945 BTNL9Q6UXG8 535 aa15.19■□□□□ 0.02
PTCH1-218ENST00000548945 TIFAQ96CG3 184 aa15.19■□□□□ 0.02
PTCH1-218ENST00000548945 RANBP17Q9H2T7 1088 aaKnown RBP15.19■□□□□ 0.02
PTCH1-218ENST00000548945 ZNF576Q9H609 170 aa15.19■□□□□ 0.02
PTCH1-218ENST00000548945 PNMA2Q9UL42 364 aa15.19■□□□□ 0.02
PTCH1-218ENST00000548945 CCPG1Q9ULG6 757 aa15.19■□□□□ 0.02
PTCH1-218ENST00000548945 MUC3AQ02505 3323 aa15.19■□□□□ 0.02
PTCH1-218ENST00000548945 ZMYM6O95789 1325 aa15.18■□□□□ 0.02
PTCH1-218ENST00000548945 SMPD1P17405 629 aa15.18■□□□□ 0.02
PTCH1-218ENST00000548945 GRIN2CQ14957 1233 aa15.18■□□□□ 0.02
PTCH1-218ENST00000548945 MUM1L1Q5H9M0 696 aa15.18■□□□□ 0.02
PTCH1-218ENST00000548945 TAPT1Q6NXT6 567 aa15.18■□□□□ 0.02
PTCH1-218ENST00000548945 CXCL17Q6UXB2 119 aa15.18■□□□□ 0.02
PTCH1-218ENST00000548945 IL23AQ9NPF7 189 aa15.18■□□□□ 0.02
PTCH1-218ENST00000548945 INCENPQ9NQS7 918 aa15.18■□□□□ 0.02
PTCH1-218ENST00000548945 TCP11L1Q9NUJ3 509 aa15.18■□□□□ 0.02
PTCH1-218ENST00000548945 ADD3Q9UEY8 706 aaKnown RBP15.18■□□□□ 0.02
PTCH1-218ENST00000548945 GBF1Q92538 1859 aa15.18■□□□□ 0.02
PTCH1-218ENST00000548945 TOP1P11387 765 aaKnown RBP15.17■□□□□ 0.02
PTCH1-218ENST00000548945 ITGA7Q13683 1181 aa15.17■□□□□ 0.02
PTCH1-218ENST00000548945 ANKRD45Q5TZF3 282 aa15.17■□□□□ 0.02
PTCH1-218ENST00000548945 VPS53Q5VIR6 699 aa15.17■□□□□ 0.02
PTCH1-218ENST00000548945 NSMFQ6X4W1 530 aa15.17■□□□□ 0.02
PTCH1-218ENST00000548945 ZNF365Q70YC5 407 aa15.17■□□□□ 0.02
PTCH1-218ENST00000548945 HERVK_113Q902F9 699 aa15.17■□□□□ 0.02
PTCH1-218ENST00000548945 PPP1R12CQ9BZL4 782 aa15.17■□□□□ 0.02
PTCH1-218ENST00000548945 MTIF3Q9H2K0 278 aaKnown RBP15.17■□□□□ 0.02
PTCH1-218ENST00000548945 HIPK3Q9H422 1215 aa15.17■□□□□ 0.02
PTCH1-218ENST00000548945 DYNC1LI2O43237 492 aaPredicted RBP15.16■□□□□ 0.02
PTCH1-218ENST00000548945 FGAP02671 866 aa15.16■□□□□ 0.02
PTCH1-218ENST00000548945 PCP11498 1178 aaKnown RBP15.16■□□□□ 0.02
PTCH1-218ENST00000548945 CYP2C18P33260 490 aa15.16■□□□□ 0.02
PTCH1-218ENST00000548945 PDE1AP54750 535 aa15.16■□□□□ 0.02
PTCH1-218ENST00000548945 CCDC96Q2M329 555 aa15.16■□□□□ 0.02
PTCH1-218ENST00000548945 DUSP28Q4G0W2 176 aa15.16■□□□□ 0.02
PTCH1-218ENST00000548945 MCMDC2Q4G0Z9 681 aa15.16■□□□□ 0.02
PTCH1-218ENST00000548945 SYDE2Q5VT97 1194 aa15.16■□□□□ 0.02
PTCH1-218ENST00000548945 FBXO16Q8IX29 292 aaPredicted RBP15.16■□□□□ 0.02
PTCH1-218ENST00000548945 SYMPKQ92797 1274 aaKnown RBP15.16■□□□□ 0.02
PTCH1-218ENST00000548945 CHMP4CQ96CF2 233 aa15.16■□□□□ 0.02
PTCH1-218ENST00000548945 PBX4Q9BYU1 374 aa15.16■□□□□ 0.02
PTCH1-218ENST00000548945 PDGFCQ9NRA1 345 aa15.16■□□□□ 0.02
PTCH1-218ENST00000548945 SCN10AQ9Y5Y9 1956 aa15.16■□□□□ 0.02
PTCH1-218ENST00000548945 GRIN2DO15399 1336 aa15.16■□□□□ 0.02
PTCH1-218ENST00000548945 RRP1P56182 461 aaKnown RBP15.15■□□□□ 0.02
PTCH1-218ENST00000548945 SNAP25P60880 206 aa15.15■□□□□ 0.02
PTCH1-218ENST00000548945 HDAC1Q13547 482 aaPredicted RBP15.15■□□□□ 0.02
PTCH1-218ENST00000548945 RAB30Q15771 203 aa15.15■□□□□ 0.02
PTCH1-218ENST00000548945 KIAA1211Q6ZU35 1233 aa15.15■□□□□ 0.02
PTCH1-218ENST00000548945 RASGRP2Q7LDG7 609 aa15.15■□□□□ 0.02
PTCH1-218ENST00000548945 TTC14Q96N46 770 aa15.15■□□□□ 0.02
PTCH1-218ENST00000548945 TMEM47Q9BQJ4 181 aa15.15■□□□□ 0.02
PTCH1-218ENST00000548945 NOC4LQ9BVI4 516 aaKnown RBP15.15■□□□□ 0.02
PTCH1-218ENST00000548945 RBM47A0AV96 593 aaKnown RBP15.14■□□□□ 0.01
PTCH1-218ENST00000548945 FGBP02675 491 aa15.14■□□□□ 0.01
PTCH1-218ENST00000548945 ACRP10323 421 aa15.14■□□□□ 0.01
PTCH1-218ENST00000548945 HSPD1P10809 573 aaKnown RBP15.14■□□□□ 0.01
PTCH1-218ENST00000548945 NT5C2P49902 561 aa15.14■□□□□ 0.01
PTCH1-218ENST00000548945 ALDH5A1P51649 535 aaPredicted RBP15.14■□□□□ 0.01
PTCH1-218ENST00000548945 BAATQ14032 418 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms